RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W SPT20P50875 604 aa5.43□□□□□ -1.54
UBC6YER100W PIL1P53252 339 aaKnown RBP5.43□□□□□ -1.54
UBC6YER100W FHN1P53279 174 aa5.43□□□□□ -1.54
UBC6YER100W VPS9P54787 451 aa5.43□□□□□ -1.54
UBC6YER100W EFR3Q03653 782 aaKnown RBP5.43□□□□□ -1.54
UBC6YER100W YDR131CQ03899 556 aa5.43□□□□□ -1.54
UBC6YER100W RAD30Q04049 632 aa5.43□□□□□ -1.54
UBC6YER100W RTN2Q12443 393 aa5.43□□□□□ -1.54
UBC6YER100W RPS13P05756 151 aaKnown RBP5.42□□□□□ -1.54
UBC6YER100W PWP1P21304 576 aaKnown RBP5.42□□□□□ -1.54
UBC6YER100W DBF4P32325 704 aa5.42□□□□□ -1.54
UBC6YER100W ALY1P36117 915 aa5.42□□□□□ -1.54
UBC6YER100W MUM2P38236 366 aa5.42□□□□□ -1.54
UBC6YER100W HRB1P38922 454 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
UBC6YER100W REV7P38927 245 aa5.42□□□□□ -1.54
UBC6YER100W INN1P53901 409 aa5.42□□□□□ -1.54
UBC6YER100W YMR155WQ03795 547 aa5.42□□□□□ -1.54
UBC6YER100W ARP9Q05123 467 aa5.42□□□□□ -1.54
UBC6YER100W SWT1Q12104 458 aa5.42□□□□□ -1.54
UBC6YER100W YKL033W-AQ86ZR7 236 aa5.42□□□□□ -1.54
UBC6YER100W KAR3P17119 729 aa5.41□□□□□ -1.54
UBC6YER100W PDE1P22434 369 aa5.41□□□□□ -1.54
UBC6YER100W LST4P34239 828 aa5.41□□□□□ -1.54
UBC6YER100W PFK26P40433 827 aaKnown RBP5.41□□□□□ -1.54
UBC6YER100W ROK1P45818 564 aaPredicted RBP5.41□□□□□ -1.54
UBC6YER100W DSD1P53095 428 aa5.41□□□□□ -1.54
UBC6YER100W SPC98P53540 846 aa5.41□□□□□ -1.54
UBC6YER100W YNR061CP53747 219 aa5.41□□□□□ -1.54
UBC6YER100W ERO1Q03103 563 aa5.41□□□□□ -1.54
UBC6YER100W NGL3Q03210 505 aa5.41□□□□□ -1.54
UBC6YER100W CRF1Q04930 467 aa5.41□□□□□ -1.54
UBC6YER100W RIX7Q07844 837 aaKnown RBP5.41□□□□□ -1.54
UBC6YER100W GRX6Q12438 231 aa5.41□□□□□ -1.54
UBC6YER100W PNO1Q99216 274 aaKnown RBP5.41□□□□□ -1.54
UBC6YER100W CET1O13297 549 aaPredicted RBP5.4□□□□□ -1.54
UBC6YER100W YML003WP0CF16 290 aa5.4□□□□□ -1.54
UBC6YER100W CBS1P14066 229 aa5.4□□□□□ -1.54
UBC6YER100W KGD2P19262 463 aaPredicted RBP5.4□□□□□ -1.54
UBC6YER100W SRB5P32585 307 aa5.4□□□□□ -1.54
UBC6YER100W TSA1P34760 196 aaKnown RBP5.4□□□□□ -1.54
UBC6YER100W POL12P38121 705 aaPredicted RBP5.4□□□□□ -1.54
UBC6YER100W FMP52P40008 231 aa5.4□□□□□ -1.54
UBC6YER100W RGI2P40188 164 aa5.4□□□□□ -1.54
UBC6YER100W BUL1P48524 976 aa5.4□□□□□ -1.54
UBC6YER100W PAN2P53010 1115 aaPredicted RBP5.4□□□□□ -1.54
UBC6YER100W JJJ1P53863 590 aa5.4□□□□□ -1.54
UBC6YER100W ZDS2P54786 942 aa5.4□□□□□ -1.54
UBC6YER100W YSH1Q06224 779 aaPredicted RBP5.4□□□□□ -1.54
UBC6YER100W ILS1P09436 1072 aaKnown RBP5.39□□□□□ -1.55
UBC6YER100W ABF1P14164 731 aa5.39□□□□□ -1.55
UBC6YER100W ECM32P32644 1121 aaKnown RBP5.39□□□□□ -1.55
UBC6YER100W KES1P35844 434 aaKnown RBP5.39□□□□□ -1.55
UBC6YER100W UBP13P38187 747 aa5.39□□□□□ -1.55
UBC6YER100W RTS1P38903 757 aa5.39□□□□□ -1.55
UBC6YER100W JEM1P40358 645 aa5.39□□□□□ -1.55
UBC6YER100W YJL068CP40363 299 aa5.39□□□□□ -1.55
UBC6YER100W MET18P40469 1032 aa5.39□□□□□ -1.55
UBC6YER100W MET28P40573 187 aa5.39□□□□□ -1.55
UBC6YER100W YJL163CP46996 555 aa5.39□□□□□ -1.55
UBC6YER100W GLO1P50107 326 aa5.39□□□□□ -1.55
UBC6YER100W RIM8P53179 542 aa5.39□□□□□ -1.55
UBC6YER100W RIA1P53893 1110 aa5.39□□□□□ -1.55
UBC6YER100W INA17Q02888 182 aa5.39□□□□□ -1.55
UBC6YER100W ESC8Q08119 714 aa5.39□□□□□ -1.55
UBC6YER100W PRS5Q12265 496 aaKnown RBP5.39□□□□□ -1.55
UBC6YER100W DFR1P07807 211 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
UBC6YER100W PMS1P14242 873 aa5.38□□□□□ -1.55
UBC6YER100W FUB1P25659 250 aa5.38□□□□□ -1.55
UBC6YER100W PEP3P27801 918 aa5.38□□□□□ -1.55
UBC6YER100W CDC5P32562 705 aa5.38□□□□□ -1.55
UBC6YER100W VPH1P32563 840 aaKnown RBP5.38□□□□□ -1.55
UBC6YER100W PHO11P35842 467 aa5.38□□□□□ -1.55
UBC6YER100W CCL1P37366 393 aa5.38□□□□□ -1.55
UBC6YER100W PHO12P38693 467 aa5.38□□□□□ -1.55
UBC6YER100W YNG2P38806 282 aaKnown RBP5.38□□□□□ -1.55
UBC6YER100W YGR066CP53242 292 aa5.38□□□□□ -1.55
UBC6YER100W NRD1P53617 575 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
UBC6YER100W RPS15Q01855 142 aaKnown RBP5.38□□□□□ -1.55
UBC6YER100W YML119WQ03208 357 aa5.38□□□□□ -1.55
UBC6YER100W YEH1Q07804 573 aa5.38□□□□□ -1.55
UBC6YER100W IRC13Q08630 104 aa5.38□□□□□ -1.55
UBC6YER100W BAG7Q12128 409 aa5.38□□□□□ -1.55
UBC6YER100W YJR112W-AQ3E743 109 aa5.38□□□□□ -1.55
UBC6YER100W THR1P17423 357 aaKnown RBP5.37□□□□□ -1.55
UBC6YER100W TPM1P17536 199 aaKnown RBP5.37□□□□□ -1.55
UBC6YER100W CDC15P27636 974 aa5.37□□□□□ -1.55
UBC6YER100W EFT1P32324 842 aaKnown RBP5.37□□□□□ -1.55
UBC6YER100W ANP1P32629 500 aa5.37□□□□□ -1.55
UBC6YER100W CAJ1P39101 391 aa5.37□□□□□ -1.55
UBC6YER100W IME4P41833 600 aa5.37□□□□□ -1.55
UBC6YER100W MNN10P50108 393 aaKnown RBP5.37□□□□□ -1.55
UBC6YER100W IMO32P53219 342 aa5.37□□□□□ -1.55
UBC6YER100W RMT2Q03305 412 aa5.37□□□□□ -1.55
UBC6YER100W STP3Q05937 343 aa5.37□□□□□ -1.55
UBC6YER100W YDL086WQ07505 273 aa5.37□□□□□ -1.55
UBC6YER100W YPL272CQ08984 517 aa5.37□□□□□ -1.55
UBC6YER100W MLH3Q12083 715 aa5.37□□□□□ -1.55
UBC6YER100W LYS21Q12122 440 aaKnown RBP5.37□□□□□ -1.55
UBC6YER100W GET3Q12154 354 aaKnown RBP5.37□□□□□ -1.55
UBC6YER100W HIF1Q12373 385 aa5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms