RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	TMN2	Q04562	672 aa		7.38	□□□□□ -1.23
SKP1	YDR328C	FAR8	Q05040	523 aa		7.38	□□□□□ -1.23
SKP1	YDR328C	CMS1	Q07897	291 aa	Known RBP	7.38	□□□□□ -1.23
SKP1	YDR328C	LDB17	Q12342	491 aa		7.38	□□□□□ -1.23
SKP1	YDR328C	PEX11	Q12462	236 aa		7.38	□□□□□ -1.23
SKP1	YDR328C	YEL077C	Q3E7X8	1277 aa		7.38	□□□□□ -1.23
SKP1	YDR328C	SSC1	P0CS90	654 aa	Known RBP	7.37	□□□□□ -1.23
SKP1	YDR328C	ARF2	P19146	181 aa	Known RBP	7.37	□□□□□ -1.23
SKP1	YDR328C	CLN1	P20437	546 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	SIR1	P21691	654 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	RAM1	P22007	431 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	MRPL8	P22353	238 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	MIH1	P23748	554 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	BEM3	P32873	1128 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	TGL4	P36165	910 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	POL12	P38121	705 aa	Predicted RBP	7.37	□□□□□ -1.23
SKP1	YDR328C	SEO1	P39709	593 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	UBP7	P40453	1071 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	TIM13	P53299	105 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	IPI3	P53877	555 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	LDB18	Q07887	179 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	BUD20	Q08004	166 aa	Predicted RBP	7.37	□□□□□ -1.23
SKP1	YDR328C	PEX15	Q08215	383 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	SLP1	Q12232	587 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	YLR046C	Q12253	270 aa		7.37	□□□□□ -1.23
SKP1	YDR328C	PDH1	Q12428	516 aa	Known RBP	7.37	□□□□□ -1.23
SKP1	YDR328C	KIN3	P22209	435 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	GEX1	P25596	615 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	ALY1	P36117	915 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	GEX2	P36173	615 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	YBR032W	P38223	100 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	GGA2	P38817	585 aa	Known RBP	7.36	□□□□□ -1.23
SKP1	YDR328C	REV7	P38927	245 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	DUN1	P39009	513 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	RAD26	P40352	1085 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	TFG1	P41895	735 aa	Predicted RBP	7.36	□□□□□ -1.23
SKP1	YDR328C	YJL107C	P42947	387 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	TRS85	P46944	698 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	YTP1	P53584	459 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	RSC4	Q02206	625 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	NUP100	Q02629	959 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	NHX1	Q04121	633 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	CDC123	Q05791	360 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	YSH1	Q06224	779 aa	Predicted RBP	7.36	□□□□□ -1.23
SKP1	YDR328C	FLC1	Q08967	793 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	DAP1	Q12091	152 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	YPR117W	Q06116	2489 aa		7.36	□□□□□ -1.23
SKP1	YDR328C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	7.35	□□□□□ -1.23	not detected
SKP1	YDR328C	DAL81	P21657	970 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	ATP12	P22135	325 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	GDA1	P32621	518 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	TYE7	P33122	291 aa	Predicted RBP	7.35	□□□□□ -1.23
SKP1	YDR328C	COY1	P34237	679 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	YHR131C	P38835	850 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	CRP1	P38845	465 aa	Known RBP	7.35	□□□□□ -1.23
SKP1	YDR328C	VPS41	P38959	992 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	MEF2	P39677	819 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	DOT6	P40059	670 aa	Known RBP	7.35	□□□□□ -1.23
SKP1	YDR328C	AIM14	P53109	570 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	BIO4	P53630	237 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	NOP15	P53927	220 aa	Predicted RBP	7.35	□□□□□ -1.23
SKP1	YDR328C	PIR1	Q03178	341 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	TRS31	Q03337	283 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	RSC2	Q06488	889 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	VHS3	Q08438	674 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	CLP1	Q08685	445 aa	Predicted RBP	7.35	□□□□□ -1.23
SKP1	YDR328C	TRE2	Q08693	809 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	RMD5	Q12508	421 aa		7.35	□□□□□ -1.23
SKP1	YDR328C	SST2	P11972	698 aa	Known RBP	7.34	□□□□□ -1.23
SKP1	YDR328C	KEX2	P13134	814 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	AEP1	P32493	518 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	SWE1	P32944	819 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	YKL097C	P34245	136 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	RDH54	P38086	958 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	MRP21	P38175	177 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	YHI9	P38765	294 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	SSP120	P39931	234 aa	Known RBP	7.34	□□□□□ -1.23
SKP1	YDR328C	RPL34B	P40525	121 aa	Known RBP	7.34	□□□□□ -1.23
SKP1	YDR328C	DSN1	P40568	576 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	ERG10	P41338	398 aa	Known RBP	7.34	□□□□□ -1.23
SKP1	YDR328C	AIM23	P47015	356 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	LIA1	P47120	325 aa	Known RBP	7.34	□□□□□ -1.23
SKP1	YDR328C	BUD32	P53323	261 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	HST2	P53686	357 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	ORC3	P54790	616 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	ADE12	P80210	433 aa	Known RBP	7.34	□□□□□ -1.23
SKP1	YDR328C	REG1	Q00816	1014 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	YLR053C	Q12026	108 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	KCS1	Q12494	1050 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	YLR149C	Q99296	730 aa		7.34	□□□□□ -1.23
SKP1	YDR328C	ERG20	P08524	352 aa	Known RBP	7.33	□□□□□ -1.24
SKP1	YDR328C	SCH9	P11792	824 aa	Known RBP	7.33	□□□□□ -1.24
SKP1	YDR328C	BET2	P20133	325 aa		7.33	□□□□□ -1.24
SKP1	YDR328C	HRR25	P29295	494 aa	Known RBP	7.33	□□□□□ -1.24
SKP1	YDR328C	RIM1	P32445	135 aa	Known RBP	7.33	□□□□□ -1.24
SKP1	YDR328C	LIP5	P32875	414 aa		7.33	□□□□□ -1.24
SKP1	YDR328C	CYM1	P32898	989 aa		7.33	□□□□□ -1.24
SKP1	YDR328C	MNN1	P39106	762 aa		7.33	□□□□□ -1.24
SKP1	YDR328C	PEP8	P40335	379 aa		7.33	□□□□□ -1.24
SKP1	YDR328C	PFK26	P40433	827 aa	Known RBP	7.33	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 59.9 ms