RNA–Protein interactions for RNA: YDR234W

LYS4, Transcript of Homoaconitase, yeastyeast

Gene LYS4, Length 2,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LYS4YDR234W NOP15P53927 220 aaPredicted RBP11.2□□□□□ -0.62
LYS4YDR234W YMR155WQ03795 547 aa11.2□□□□□ -0.62
LYS4YDR234W HRT3Q12347 344 aa11.2□□□□□ -0.62
LYS4YDR234W MDM20Q12387 796 aaKnown RBP11.2□□□□□ -0.62
LYS4YDR234W UBR2Q07963 1872 aa11.19□□□□□ -0.62
LYS4YDR234W HIS1P00498 297 aaKnown RBP11.19□□□□□ -0.62
LYS4YDR234W MPH2P0CD99 609 aa11.19□□□□□ -0.62
LYS4YDR234W ATP12P22135 325 aa11.19□□□□□ -0.62
LYS4YDR234W EAP1P36041 632 aaKnown RBP11.19□□□□□ -0.62
LYS4YDR234W URA8P38627 578 aaPredicted RBP11.19□□□□□ -0.62
LYS4YDR234W ARC1P46672 376 aaKnown RBP11.19□□□□□ -0.62
LYS4YDR234W TRF5P48561 642 aaKnown RBP11.19□□□□□ -0.62
LYS4YDR234W IST1P53843 298 aaPredicted RBP11.19□□□□□ -0.62
LYS4YDR234W RSC2Q06488 889 aa11.19□□□□□ -0.62
LYS4YDR234W APC5Q08683 685 aa11.19□□□□□ -0.62
LYS4YDR234W SEC39Q12745 709 aa11.19□□□□□ -0.62
LYS4YDR234W SPR1P32603 445 aa11.18□□□□□ -0.62
LYS4YDR234W TEL2P53038 688 aa11.18□□□□□ -0.62
LYS4YDR234W MCM6P53091 1017 aaKnown RBP11.18□□□□□ -0.62
LYS4YDR234W COS6P53344 381 aa11.18□□□□□ -0.62
LYS4YDR234W NHX1Q04121 633 aa11.18□□□□□ -0.62
LYS4YDR234W YDL073WQ07454 984 aa11.18□□□□□ -0.62
LYS4YDR234W LDB19Q12502 818 aa11.18□□□□□ -0.62
LYS4YDR234W ROK1P45818 564 aaPredicted RBP11.18□□□□□ -0.62
LYS4YDR234W MTD1Q02046 320 aaKnown RBP11.18□□□□□ -0.62
LYS4YDR234W AIM32Q04689 311 aa11.18□□□□□ -0.62
LYS4YDR234W GLN4P13188 809 aaKnown RBP11.17□□□□□ -0.62
LYS4YDR234W PDC5P16467 563 aaKnown RBP11.17□□□□□ -0.62
LYS4YDR234W FUB1P25659 250 aa11.17□□□□□ -0.62
LYS4YDR234W FHL1P39521 936 aa11.17□□□□□ -0.62
LYS4YDR234W TGL3P40308 642 aa11.17□□□□□ -0.62
LYS4YDR234W SNG1P46950 547 aa11.17□□□□□ -0.62
LYS4YDR234W YJL132WP47014 750 aa11.17□□□□□ -0.62
LYS4YDR234W OCA6Q12454 224 aa11.17□□□□□ -0.62
LYS4YDR234W AFI1Q99222 893 aa11.17□□□□□ -0.62
LYS4YDR234W RHO2P06781 192 aa11.16□□□□□ -0.62
LYS4YDR234W HEM12P32347 362 aaPredicted RBP11.16□□□□□ -0.62
LYS4YDR234W BEM3P32873 1128 aa11.16□□□□□ -0.62
LYS4YDR234W SLX8P40072 274 aa11.16□□□□□ -0.62
LYS4YDR234W MAM33P40513 266 aa11.16□□□□□ -0.62
LYS4YDR234W PRM2P40534 656 aa11.16□□□□□ -0.62
LYS4YDR234W AIF1P52923 378 aa11.16□□□□□ -0.62
LYS4YDR234W REX2P54964 269 aaKnown RBP11.16□□□□□ -0.62
LYS4YDR234W RLI1Q03195 608 aaKnown RBP11.16□□□□□ -0.62
LYS4YDR234W PMT7Q06644 662 aa11.16□□□□□ -0.62
LYS4YDR234W RRP36Q12481 300 aaPredicted RBP11.16□□□□□ -0.62
LYS4YDR234W YDR524C-BQ3E6R4 66 aa11.16□□□□□ -0.62
LYS4YDR234W COX6P00427 148 aa11.16□□□□□ -0.62
LYS4YDR234W PRP6P19735 899 aaPredicted RBP11.16□□□□□ -0.62
LYS4YDR234W AMD2P22580 549 aa11.16□□□□□ -0.62
LYS4YDR234W BEM1P29366 551 aa11.16□□□□□ -0.62
LYS4YDR234W RIM1P32445 135 aaKnown RBP11.16□□□□□ -0.62
LYS4YDR234W GGA2P38817 585 aaKnown RBP11.16□□□□□ -0.62
LYS4YDR234W YHR182WP38870 785 aa11.16□□□□□ -0.62
LYS4YDR234W VMA13P41807 478 aaKnown RBP11.16□□□□□ -0.62
LYS4YDR234W YGR016WP53209 190 aa11.16□□□□□ -0.62
LYS4YDR234W ULP1Q02724 621 aa11.16□□□□□ -0.62
LYS4YDR234W ENT5Q03769 411 aaKnown RBP11.16□□□□□ -0.62
LYS4YDR234W BCP1Q06338 283 aa11.16□□□□□ -0.62
LYS4YDR234W RUP1Q12242 671 aa11.16□□□□□ -0.62
LYS4YDR234W HAP2P06774 265 aa11.15□□□□□ -0.62
LYS4YDR234W HSC82P15108 705 aaKnown RBP11.15□□□□□ -0.62
LYS4YDR234W SAN1P22470 610 aa11.15□□□□□ -0.62
LYS4YDR234W CLB4P24871 460 aa11.15□□□□□ -0.62
LYS4YDR234W RAD27P26793 382 aa11.15□□□□□ -0.62
LYS4YDR234W POT1P27796 417 aaKnown RBP RIP-Chip data11.15□□□□□ -0.62not detected
LYS4YDR234W YME2P32843 850 aa11.15□□□□□ -0.62
LYS4YDR234W SET2P46995 733 aaKnown RBP11.15□□□□□ -0.62
LYS4YDR234W COG2P53271 262 aa11.15□□□□□ -0.62
LYS4YDR234W TRS31Q03337 283 aa11.15□□□□□ -0.62
LYS4YDR234W PEX15Q08215 383 aa11.15□□□□□ -0.62
LYS4YDR234W SIW14P53965 281 aa11.15□□□□□ -0.63
LYS4YDR234W REG1Q00816 1014 aa11.15□□□□□ -0.63
LYS4YDR234W SPP1Q03012 353 aa11.15□□□□□ -0.63
LYS4YDR234W SNX3Q08826 162 aaKnown RBP11.15□□□□□ -0.63
LYS4YDR234W YAK1P14680 807 aa11.14□□□□□ -0.63
LYS4YDR234W ART10P18634 518 aaKnown RBP11.14□□□□□ -0.63
LYS4YDR234W SEC15P22224 910 aa11.14□□□□□ -0.63
LYS4YDR234W NUP84P52891 726 aa11.14□□□□□ -0.63
LYS4YDR234W PRO2P54885 456 aaKnown RBP11.14□□□□□ -0.63
LYS4YDR234W APM4Q99186 491 aa11.14□□□□□ -0.63
LYS4YDR234W NSP1P14907 823 aaKnown RBP11.13□□□□□ -0.63
LYS4YDR234W RGR1P19263 1082 aa11.13□□□□□ -0.63
LYS4YDR234W AST1P35183 429 aa11.13□□□□□ -0.63
LYS4YDR234W UIP5P36137 443 aa11.13□□□□□ -0.63
LYS4YDR234W PDX3P38075 228 aaKnown RBP11.13□□□□□ -0.63
LYS4YDR234W YBR284WP38150 797 aa11.13□□□□□ -0.63
LYS4YDR234W BZZ1P38822 633 aa11.13□□□□□ -0.63
LYS4YDR234W ADE12P80210 433 aaKnown RBP11.13□□□□□ -0.63
LYS4YDR234W CEG1Q01159 459 aaPredicted RBP11.13□□□□□ -0.63
LYS4YDR234W INP2Q03824 705 aa11.13□□□□□ -0.63
LYS4YDR234W GLO2Q05584 274 aa11.13□□□□□ -0.63
LYS4YDR234W GRX8Q05926 109 aa11.13□□□□□ -0.63
LYS4YDR234W ASA1Q06822 443 aa11.13□□□□□ -0.63
LYS4YDR234W SYT1Q06836 1226 aa11.13□□□□□ -0.63
LYS4YDR234W PYC2P32327 1180 aaKnown RBP11.13□□□□□ -0.63
LYS4YDR234W BIO2P32451 375 aa11.13□□□□□ -0.63
LYS4YDR234W DPH5P32469 300 aaPredicted RBP11.13□□□□□ -0.63
LYS4YDR234W PTC1P35182 281 aa11.13□□□□□ -0.63
LYS4YDR234W GCS1P35197 352 aa11.13□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms