RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C RGC1Q06108 1083 aaKnown RBP6.22□□□□□ -1.41
MSS116YDR194C RRP9Q06506 573 aaKnown RBP6.22□□□□□ -1.41
MSS116YDR194C DIA2Q08496 732 aaPredicted RBP6.22□□□□□ -1.41
MSS116YDR194C NFI1Q12216 726 aa6.22□□□□□ -1.41
MSS116YDR194C SPE4Q12455 300 aa6.22□□□□□ -1.41
MSS116YDR194C HIS5P07172 385 aa6.21□□□□□ -1.42
MSS116YDR194C CLB1P24868 471 aa6.21□□□□□ -1.42
MSS116YDR194C YCR015CP25616 317 aa6.21□□□□□ -1.42
MSS116YDR194C BUD16P39988 312 aa6.21□□□□□ -1.42
MSS116YDR194C PFK26P40433 827 aaKnown RBP6.21□□□□□ -1.42
MSS116YDR194C MTL1P53214 551 aa6.21□□□□□ -1.42
MSS116YDR194C YFT2Q06676 274 aa6.21□□□□□ -1.42
MSS116YDR194C PEX19Q07418 342 aa6.21□□□□□ -1.42
MSS116YDR194C ERG27Q12452 347 aaKnown RBP6.21□□□□□ -1.42
MSS116YDR194C VMA2P16140 517 aaKnown RBP6.2□□□□□ -1.42
MSS116YDR194C MSB1P21339 1137 aaKnown RBP6.2□□□□□ -1.42
MSS116YDR194C RFC1P38630 861 aaKnown RBP6.2□□□□□ -1.42
MSS116YDR194C YJL193WP39542 402 aa6.2□□□□□ -1.42
MSS116YDR194C YIL077CP40508 320 aa6.2□□□□□ -1.42
MSS116YDR194C HOF1Q05080 669 aa6.2□□□□□ -1.42
MSS116YDR194C GCD1P09032 578 aaPredicted RBP6.2□□□□□ -1.42
MSS116YDR194C URK1P27515 501 aa6.2□□□□□ -1.42
MSS116YDR194C SWC3P31376 625 aa6.2□□□□□ -1.42
MSS116YDR194C UBP11P36026 717 aa6.2□□□□□ -1.42
MSS116YDR194C REG2P38232 338 aa6.2□□□□□ -1.42
MSS116YDR194C SSU1P41930 458 aa6.2□□□□□ -1.42
MSS116YDR194C SKP2P42843 763 aa6.2□□□□□ -1.42
MSS116YDR194C IDS2P46958 469 aa6.2□□□□□ -1.42
MSS116YDR194C OGG1P53397 376 aaPredicted RBP6.2□□□□□ -1.42
MSS116YDR194C HOT1Q03213 719 aa6.2□□□□□ -1.42
MSS116YDR194C GYL1Q04322 720 aa6.2□□□□□ -1.42
MSS116YDR194C ESC8Q08119 714 aa6.2□□□□□ -1.42
MSS116YDR194C YDL176WQ12027 708 aa6.2□□□□□ -1.42
MSS116YDR194C RIM20Q12033 661 aa6.2□□□□□ -1.42
MSS116YDR194C YJR112W-AQ3E743 109 aa6.2□□□□□ -1.42
MSS116YDR194C ISN1Q99312 450 aa6.2□□□□□ -1.42
MSS116YDR194C YRF1-4O13559 1382 aa6.2□□□□□ -1.42
MSS116YDR194C RPP2AP05319 106 aaKnown RBP6.19□□□□□ -1.42
MSS116YDR194C STE12P13574 688 aa6.19□□□□□ -1.42
MSS116YDR194C PRE10P21242 288 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
MSS116YDR194C TRX1P22217 103 aaKnown RBP6.19□□□□□ -1.42
MSS116YDR194C CLB3P24870 427 aa6.19□□□□□ -1.42
MSS116YDR194C FEN2P25621 512 aaKnown RBP6.19□□□□□ -1.42
MSS116YDR194C AUR1P36107 401 aaPredicted RBP6.19□□□□□ -1.42
MSS116YDR194C MAL33P38157 468 aa6.19□□□□□ -1.42
MSS116YDR194C MAM1P40065 302 aa6.19□□□□□ -1.42
MSS116YDR194C TMN3P40071 706 aa6.19□□□□□ -1.42
MSS116YDR194C LCL3P53153 274 aa6.19□□□□□ -1.42
MSS116YDR194C MTG1Q03151 367 aaPredicted RBP6.19□□□□□ -1.42
MSS116YDR194C CTK1Q03957 528 aaKnown RBP6.19□□□□□ -1.42
MSS116YDR194C YEH1Q07804 573 aa6.19□□□□□ -1.42
MSS116YDR194C LYS21Q12122 440 aaKnown RBP6.19□□□□□ -1.42
MSS116YDR194C FRE6Q12473 712 aa6.19□□□□□ -1.42
MSS116YDR194C CAF20P12962 161 aaKnown RBP6.18□□□□□ -1.42
MSS116YDR194C URA7P28274 579 aaKnown RBP6.18□□□□□ -1.42
MSS116YDR194C RPN2P32565 945 aaKnown RBP6.18□□□□□ -1.42
MSS116YDR194C APE3P37302 537 aaKnown RBP6.18□□□□□ -1.42
MSS116YDR194C THI6P41835 540 aa6.18□□□□□ -1.42
MSS116YDR194C ZIM17P42844 174 aa6.18□□□□□ -1.42
MSS116YDR194C YJL055WP47044 245 aa6.18□□□□□ -1.42
MSS116YDR194C MDE1P47095 244 aa6.18□□□□□ -1.42
MSS116YDR194C LYS4P49367 693 aaPredicted RBP6.18□□□□□ -1.42
MSS116YDR194C KEL3Q08979 651 aaPredicted RBP6.18□□□□□ -1.42
MSS116YDR194C HMI1Q12039 706 aa6.18□□□□□ -1.42
MSS116YDR194C TRM11Q12463 433 aa6.18□□□□□ -1.42
MSS116YDR194C YOR019WQ99248 730 aa6.18□□□□□ -1.42
MSS116YDR194C THR1P17423 357 aaKnown RBP6.18□□□□□ -1.42
MSS116YDR194C GLK1P17709 500 aaKnown RBP6.18□□□□□ -1.42
MSS116YDR194C YCR061WP25639 631 aa6.18□□□□□ -1.42
MSS116YDR194C MGM1P32266 881 aa6.18□□□□□ -1.42
MSS116YDR194C DSS4P32601 143 aa6.18□□□□□ -1.42
MSS116YDR194C MCX1P38323 520 aaPredicted RBP6.18□□□□□ -1.42
MSS116YDR194C YIL161WP40449 235 aaKnown RBP6.18□□□□□ -1.42
MSS116YDR194C REX3Q12090 404 aa6.18□□□□□ -1.42
MSS116YDR194C STF1P01098 86 aa6.17□□□□□ -1.42
MSS116YDR194C CDC6P09119 513 aa6.17□□□□□ -1.42
MSS116YDR194C BCS1P32839 456 aa6.17□□□□□ -1.42
MSS116YDR194C CST26P38226 397 aa6.17□□□□□ -1.42
MSS116YDR194C VID24P38263 362 aa6.17□□□□□ -1.42
MSS116YDR194C CCT6P39079 546 aa6.17□□□□□ -1.42
MSS116YDR194C BUD27P43573 796 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
MSS116YDR194C YGR054WP53235 642 aaKnown RBP6.17□□□□□ -1.42
MSS116YDR194C YPL107WQ02873 248 aa6.17□□□□□ -1.42
MSS116YDR194C ROT1Q03691 256 aa6.17□□□□□ -1.42
MSS116YDR194C YPL272CQ08984 517 aa6.17□□□□□ -1.42
MSS116YDR194C NPC2Q12408 173 aa6.17□□□□□ -1.42
MSS116YDR194C YPT6Q99260 215 aa6.17□□□□□ -1.42
MSS116YDR194C AI1P03875 834 aa6.17□□□□□ -1.42
MSS116YDR194C DFR1P07807 211 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
MSS116YDR194C POT1P27796 417 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
MSS116YDR194C DOT5P40553 215 aa6.17□□□□□ -1.42
MSS116YDR194C SGN1P40561 250 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
MSS116YDR194C IME4P41833 600 aa6.17□□□□□ -1.42
MSS116YDR194C RFX1P48743 811 aa6.17□□□□□ -1.42
MSS116YDR194C YGL036WP53185 909 aaPredicted RBP6.17□□□□□ -1.42
MSS116YDR194C CRF1Q04930 467 aa6.17□□□□□ -1.42
MSS116YDR194C SWT1Q12104 458 aa6.17□□□□□ -1.42
MSS116YDR194C SKS1Q12505 502 aa6.17□□□□□ -1.42
MSS116YDR194C MDH1P17505 334 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
MSS116YDR194C VPS34P22543 875 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms