RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C YMR317WQ04893 1140 aa2.26□□□□□ -2.05
CSN9YDR179C RTT103Q05543 409 aa2.26□□□□□ -2.05
CSN9YDR179C THI3Q07471 609 aa2.26□□□□□ -2.05
CSN9YDR179C PEX15Q08215 383 aa2.26□□□□□ -2.05
CSN9YDR179C PSF3Q12146 194 aa2.26□□□□□ -2.05
CSN9YDR179C Q0010Q9ZZX9 128 aa2.26□□□□□ -2.05
CSN9YDR179C PPZ1P26570 692 aa2.25□□□□□ -2.05
CSN9YDR179C GSH1P32477 678 aa2.25□□□□□ -2.05
CSN9YDR179C FMP46P36141 133 aaKnown RBP2.25□□□□□ -2.05
CSN9YDR179C STB5P38699 743 aa2.25□□□□□ -2.05
CSN9YDR179C BZZ1P38822 633 aa2.25□□□□□ -2.05
CSN9YDR179C ARO9P38840 513 aaPredicted RBP2.25□□□□□ -2.05
CSN9YDR179C ERV46P39727 415 aa2.25□□□□□ -2.05
CSN9YDR179C NIT2P47016 307 aa2.25□□□□□ -2.05
CSN9YDR179C YRB30P53107 440 aaPredicted RBP2.25□□□□□ -2.05
CSN9YDR179C ECI1Q05871 280 aa2.25□□□□□ -2.05
CSN9YDR179C TRE2Q08693 809 aa2.25□□□□□ -2.05
CSN9YDR179C LEA1Q08963 238 aaPredicted RBP2.25□□□□□ -2.05
CSN9YDR179C DIN7Q12086 430 aa2.25□□□□□ -2.05
CSN9YDR179C YBR255C-AQ3E776 120 aa2.25□□□□□ -2.05
CSN9YDR179C YFL068WP0CX99 160 aa2.24□□□□□ -2.05
CSN9YDR179C YLL066W-AP0CY00 160 aa2.24□□□□□ -2.05
CSN9YDR179C YLL067W-AP0CY01 160 aa2.24□□□□□ -2.05
CSN9YDR179C OCT1P35999 772 aa2.24□□□□□ -2.05
CSN9YDR179C YLF2P38746 405 aa2.24□□□□□ -2.05
CSN9YDR179C TRS31Q03337 283 aa2.24□□□□□ -2.05
CSN9YDR179C CRF1Q04930 467 aa2.24□□□□□ -2.05
CSN9YDR179C FMP42Q04991 504 aa2.24□□□□□ -2.05
CSN9YDR179C PDR8Q06149 701 aa2.24□□□□□ -2.05
CSN9YDR179C CRD1Q07560 283 aa2.24□□□□□ -2.05
CSN9YDR179C RTK1Q12100 620 aaPredicted RBP2.24□□□□□ -2.05
CSN9YDR179C TAH18Q12181 623 aa2.24□□□□□ -2.05
CSN9YDR179C DAL3P32459 195 aa2.23□□□□□ -2.05
CSN9YDR179C SDS22P36047 338 aa2.23□□□□□ -2.05
CSN9YDR179C EAF5P39995 279 aa2.23□□□□□ -2.05
CSN9YDR179C QRI7P43122 407 aa2.23□□□□□ -2.05
CSN9YDR179C ACS1Q01574 713 aa2.23□□□□□ -2.05
CSN9YDR179C VPS64Q03944 604 aa2.23□□□□□ -2.05
CSN9YDR179C SWF1Q04629 336 aa2.23□□□□□ -2.05
CSN9YDR179C POS5Q06892 414 aa2.23□□□□□ -2.05
CSN9YDR179C KAR1P11927 433 aa2.22□□□□□ -2.05
CSN9YDR179C PRE2P30656 287 aaKnown RBP2.22□□□□□ -2.05
CSN9YDR179C HEM12P32347 362 aaPredicted RBP2.22□□□□□ -2.05
CSN9YDR179C ERC1P38767 581 aa2.22□□□□□ -2.05
CSN9YDR179C FUN12P39730 1002 aaKnown RBP2.22□□□□□ -2.05
CSN9YDR179C POL31P46957 487 aa2.22□□□□□ -2.05
CSN9YDR179C CAC2Q04199 468 aa2.22□□□□□ -2.05
CSN9YDR179C PIG1Q06216 648 aa2.22□□□□□ -2.05
CSN9YDR179C MCH4Q08268 501 aa2.22□□□□□ -2.05
CSN9YDR179C DBP10Q12389 995 aaKnown RBP2.22□□□□□ -2.05
CSN9YDR179C LAC1P28496 418 aa2.21□□□□□ -2.06
CSN9YDR179C MNN2P38069 597 aa2.21□□□□□ -2.06
CSN9YDR179C UBX6P47049 396 aa2.21□□□□□ -2.06
CSN9YDR179C HOS2P53096 452 aaPredicted RBP2.21□□□□□ -2.06
CSN9YDR179C EAF7P53911 425 aaKnown RBP2.21□□□□□ -2.06
CSN9YDR179C CRZ1P53968 678 aa2.21□□□□□ -2.06
CSN9YDR179C DIG1Q03063 452 aaKnown RBP2.21□□□□□ -2.06
CSN9YDR179C SLX4Q12098 748 aa2.21□□□□□ -2.06
CSN9YDR179C VAS1P07806 1104 aaKnown RBP2.2□□□□□ -2.06
CSN9YDR179C TGL1P34163 548 aa2.2□□□□□ -2.06
CSN9YDR179C HES1P35843 434 aa2.2□□□□□ -2.06
CSN9YDR179C SDS24P38314 527 aa2.2□□□□□ -2.06
CSN9YDR179C SAW1P39735 261 aa2.2□□□□□ -2.06
CSN9YDR179C YND1P40009 630 aa2.2□□□□□ -2.06
CSN9YDR179C ARB1P40024 610 aaKnown RBP2.2□□□□□ -2.06
CSN9YDR179C PHM8P40025 321 aa2.2□□□□□ -2.06
CSN9YDR179C UBP7P40453 1071 aa2.2□□□□□ -2.06
CSN9YDR179C CDC1P40986 491 aa2.2□□□□□ -2.06
CSN9YDR179C NPA3P47122 385 aa2.2□□□□□ -2.06
CSN9YDR179C PUS4P48567 403 aaKnown RBP2.2□□□□□ -2.06
CSN9YDR179C PSP1P50896 841 aaKnown RBP2.2□□□□□ -2.06
CSN9YDR179C YNL034WP53963 612 aa2.2□□□□□ -2.06
CSN9YDR179C YMR254CQ04838 102 aa2.2□□□□□ -2.06
CSN9YDR179C AIM6Q07716 390 aa2.2□□□□□ -2.06
CSN9YDR179C RPL42AP0CX27 106 aaKnown RBP2.19□□□□□ -2.06
CSN9YDR179C RPL42BP0CX28 106 aaKnown RBP2.19□□□□□ -2.06
CSN9YDR179C MRP2P10663 115 aaPredicted RBP2.19□□□□□ -2.06
CSN9YDR179C PRP16P15938 1071 aaPredicted RBP2.19□□□□□ -2.06
CSN9YDR179C CDC23P16522 626 aa2.19□□□□□ -2.06
CSN9YDR179C PHO3P24031 467 aa2.19□□□□□ -2.06
CSN9YDR179C RPS7AP26786 190 aaKnown RBP2.19□□□□□ -2.06
CSN9YDR179C YBR071WP38243 211 aa2.19□□□□□ -2.06
CSN9YDR179C VPS41P38959 992 aa2.19□□□□□ -2.06
CSN9YDR179C YJL070CP40361 888 aa2.19□□□□□ -2.06
CSN9YDR179C CUL3P53202 744 aa2.19□□□□□ -2.06
CSN9YDR179C YNL181WP53878 407 aa2.19□□□□□ -2.06
CSN9YDR179C FCP1Q03254 732 aa2.19□□□□□ -2.06
CSN9YDR179C IZH1Q03419 316 aa2.19□□□□□ -2.06
CSN9YDR179C SND1Q04007 877 aa2.19□□□□□ -2.06
CSN9YDR179C ECM16Q04217 1267 aaKnown RBP2.19□□□□□ -2.06
CSN9YDR179C ARP9Q05123 467 aa2.19□□□□□ -2.06
CSN9YDR179C ECM38Q05902 660 aaPredicted RBP2.19□□□□□ -2.06
CSN9YDR179C AAD4Q07747 329 aa2.19□□□□□ -2.06
CSN9YDR179C YMR230W-AQ3E7B5 62 aa2.19□□□□□ -2.06
CSN9YDR179C YBR139WP38109 508 aa2.18□□□□□ -2.06
CSN9YDR179C DHH1P39517 506 aaKnown RBP2.18□□□□□ -2.06
CSN9YDR179C SCS2P40075 244 aaKnown RBP2.18□□□□□ -2.06
CSN9YDR179C ASG1P40467 964 aa2.18□□□□□ -2.06
CSN9YDR179C YPR003CP53394 754 aa2.18□□□□□ -2.06
CSN9YDR179C YPL108WQ02872 168 aaPredicted RBP2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms