RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W HSM3P38348 480 aa9.65□□□□□ -0.86
SED1YDR077W YHL041WP38730 149 aa9.65□□□□□ -0.86
SED1YDR077W ELO3P40319 345 aa9.65□□□□□ -0.86
SED1YDR077W COQ6P53318 479 aa9.65□□□□□ -0.86
SED1YDR077W TRM112P53738 135 aaPredicted RBP9.65□□□□□ -0.86
SED1YDR077W CDC14Q00684 551 aa9.65□□□□□ -0.86
SED1YDR077W NHX1Q04121 633 aa9.65□□□□□ -0.86
SED1YDR077W TAF11Q04226 346 aa9.65□□□□□ -0.86
SED1YDR077W ECM38Q05902 660 aaPredicted RBP9.65□□□□□ -0.86
SED1YDR077W RSC2Q06488 889 aa9.65□□□□□ -0.86
SED1YDR077W CMS1Q07897 291 aaKnown RBP9.65□□□□□ -0.86
SED1YDR077W NOB1Q08444 459 aaKnown RBP9.65□□□□□ -0.86
SED1YDR077W OCA6Q12454 224 aa9.65□□□□□ -0.86
SED1YDR077W YEL077CQ3E7X8 1277 aa9.65□□□□□ -0.86
SED1YDR077W ERG20P08524 352 aaKnown RBP9.64□□□□□ -0.87
SED1YDR077W HMG2P12684 1045 aa9.64□□□□□ -0.87
SED1YDR077W HEM3P28789 327 aa9.64□□□□□ -0.87
SED1YDR077W HRR25P29295 494 aaKnown RBP9.64□□□□□ -0.87
SED1YDR077W MET22P32179 357 aa9.64□□□□□ -0.87
SED1YDR077W SRP101P32916 621 aa9.64□□□□□ -0.87
SED1YDR077W TGL4P36165 910 aa9.64□□□□□ -0.87
SED1YDR077W ATG12P38316 186 aa9.64□□□□□ -0.87
SED1YDR077W STB5P38699 743 aa9.64□□□□□ -0.87
SED1YDR077W OAF1P39720 1047 aaPredicted RBP9.64□□□□□ -0.87
SED1YDR077W PEP8P40335 379 aa9.64□□□□□ -0.87
SED1YDR077W PFK26P40433 827 aaKnown RBP9.64□□□□□ -0.87
SED1YDR077W IST3P40565 148 aaPredicted RBP9.64□□□□□ -0.87
SED1YDR077W PAN2P53010 1115 aaPredicted RBP9.64□□□□□ -0.87
SED1YDR077W TIM13P53299 105 aa9.64□□□□□ -0.87
SED1YDR077W GND2P53319 492 aa9.64□□□□□ -0.87
SED1YDR077W YNL058CP53947 316 aa9.64□□□□□ -0.87
SED1YDR077W EFM6P53970 246 aa9.64□□□□□ -0.87
SED1YDR077W ADY3Q07732 790 aa9.64□□□□□ -0.87
SED1YDR077W LDB18Q07887 179 aa9.64□□□□□ -0.87
SED1YDR077W YPL225WQ08971 146 aaKnown RBP9.64□□□□□ -0.87
SED1YDR077W YPQ1Q12010 308 aa9.64□□□□□ -0.87
SED1YDR077W RGS2Q99188 309 aa9.64□□□□□ -0.87
SED1YDR077W YOL087CQ99247 1116 aa9.64□□□□□ -0.87
SED1YDR077W GCY1P14065 312 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
SED1YDR077W ATP12P22135 325 aa9.63□□□□□ -0.87
SED1YDR077W AMD2P22580 549 aa9.63□□□□□ -0.87
SED1YDR077W URK1P27515 501 aa9.63□□□□□ -0.87
SED1YDR077W MRPL40P36534 297 aa9.63□□□□□ -0.87
SED1YDR077W RDH54P38086 958 aa9.63□□□□□ -0.87
SED1YDR077W MEF2P39677 819 aa9.63□□□□□ -0.87
SED1YDR077W VNX1P42839 908 aa9.63□□□□□ -0.87
SED1YDR077W FAR3P46671 204 aa9.63□□□□□ -0.87
SED1YDR077W ASN2P49090 572 aaKnown RBP9.63□□□□□ -0.87
SED1YDR077W SUB1P54000 292 aaKnown RBP9.63□□□□□ -0.87
SED1YDR077W RSC4Q02206 625 aa9.63□□□□□ -0.87
SED1YDR077W TRS31Q03337 283 aa9.63□□□□□ -0.87
SED1YDR077W BSP1Q06604 576 aa9.63□□□□□ -0.87
SED1YDR077W YLR012CQ07927 99 aa9.63□□□□□ -0.87
SED1YDR077W SLD7Q08457 257 aa9.63□□□□□ -0.87
SED1YDR077W AHC1Q12433 566 aa9.63□□□□□ -0.87
SED1YDR077W BAS1P22035 811 aa9.62□□□□□ -0.87
SED1YDR077W SEC14P24280 304 aaKnown RBP9.62□□□□□ -0.87
SED1YDR077W MSH2P25847 964 aa9.62□□□□□ -0.87
SED1YDR077W RPC19P28000 142 aaKnown RBP9.62□□□□□ -0.87
SED1YDR077W SYN8P31377 255 aa9.62□□□□□ -0.87
SED1YDR077W PHA2P32452 334 aa9.62□□□□□ -0.87
SED1YDR077W KAR9P32526 644 aa9.62□□□□□ -0.87
SED1YDR077W GDA1P32621 518 aa9.62□□□□□ -0.87
SED1YDR077W YHI9P38765 294 aa9.62□□□□□ -0.87
SED1YDR077W SEC28P40509 296 aaKnown RBP9.62□□□□□ -0.87
SED1YDR077W ARH1P48360 493 aa9.62□□□□□ -0.87
SED1YDR077W YNR063WP53749 607 aa9.62□□□□□ -0.87
SED1YDR077W NOP15P53927 220 aaPredicted RBP9.62□□□□□ -0.87
SED1YDR077W YMR209CQ03648 457 aa9.62□□□□□ -0.87
SED1YDR077W RTN1Q04947 295 aaKnown RBP9.62□□□□□ -0.87
SED1YDR077W BUD20Q08004 166 aaPredicted RBP9.62□□□□□ -0.87
SED1YDR077W YPT6Q99260 215 aa9.62□□□□□ -0.87
SED1YDR077W PRP4P20053 465 aaKnown RBP9.61□□□□□ -0.87
SED1YDR077W BEM3P32873 1128 aa9.61□□□□□ -0.87
SED1YDR077W MAK5P38112 773 aaPredicted RBP9.61□□□□□ -0.87
SED1YDR077W MRP21P38175 177 aa9.61□□□□□ -0.87
SED1YDR077W YIL161WP40449 235 aaKnown RBP9.61□□□□□ -0.87
SED1YDR077W ARC1P46672 376 aaKnown RBP9.61□□□□□ -0.87
SED1YDR077W CCT8P47079 568 aaKnown RBP9.61□□□□□ -0.87
SED1YDR077W STR3P53101 465 aaKnown RBP9.61□□□□□ -0.87
SED1YDR077W BUD32P53323 261 aa9.61□□□□□ -0.87
SED1YDR077W IST1P53843 298 aaPredicted RBP9.61□□□□□ -0.87
SED1YDR077W YNL034WP53963 612 aa9.61□□□□□ -0.87
SED1YDR077W YNL018CP53976 612 aa9.61□□□□□ -0.87
SED1YDR077W TOF2Q02208 771 aa9.61□□□□□ -0.87
SED1YDR077W EAR1Q03212 550 aa9.61□□□□□ -0.87
SED1YDR077W RPN4Q03465 531 aa9.61□□□□□ -0.87
SED1YDR077W NSE5Q03718 556 aa9.61□□□□□ -0.87
SED1YDR077W YLR177WQ06251 628 aa9.61□□□□□ -0.87
SED1YDR077W YMR085WP0CF18 432 aa9.6□□□□□ -0.87
SED1YDR077W RNA1P11745 407 aaKnown RBP9.6□□□□□ -0.87
SED1YDR077W HSP26P15992 214 aaKnown RBP RIP-Chip data9.6□□□□□ -0.87not detected
SED1YDR077W ACO1P19414 778 aaKnown RBP RIP-Chip data9.6□□□□□ -0.87not detected
SED1YDR077W CLN1P20437 546 aa9.6□□□□□ -0.87
SED1YDR077W AAT2P23542 418 aaKnown RBP9.6□□□□□ -0.87
SED1YDR077W PEX34P25584 144 aa9.6□□□□□ -0.87
SED1YDR077W TOA1P32773 286 aa9.6□□□□□ -0.87
SED1YDR077W SAF1P38352 637 aa9.6□□□□□ -0.87
SED1YDR077W PHO89P38361 574 aa9.6□□□□□ -0.87
SED1YDR077W UBP7P40453 1071 aa9.6□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms