RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W ADH7P25377 361 aa2.33□□□□□ -2.04
UBP1YDL122W PUB1P32588 453 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
UBP1YDL122W PXA2P34230 853 aa2.33□□□□□ -2.04
UBP1YDL122W MPE1P35728 441 aaKnown RBP2.33□□□□□ -2.04
UBP1YDL122W KTR3P38130 404 aaPredicted RBP2.33□□□□□ -2.04
UBP1YDL122W UBP7P40453 1071 aa2.33□□□□□ -2.04
UBP1YDL122W GPP1P41277 250 aaKnown RBP2.33□□□□□ -2.04
UBP1YDL122W SEC26P41810 973 aaKnown RBP2.33□□□□□ -2.04
UBP1YDL122W UBP6P43593 499 aaKnown RBP2.33□□□□□ -2.04
UBP1YDL122W SCD6P45978 349 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
UBP1YDL122W BNA3P47039 444 aaKnown RBP2.33□□□□□ -2.04
UBP1YDL122W MRX6P48564 524 aa2.33□□□□□ -2.04
UBP1YDL122W NCE103P53615 221 aa2.33□□□□□ -2.04
UBP1YDL122W UBX4P54730 416 aa2.33□□□□□ -2.04
UBP1YDL122W SVL3Q03088 825 aaKnown RBP2.33□□□□□ -2.04
UBP1YDL122W DIC1Q06143 298 aa2.33□□□□□ -2.04
UBP1YDL122W YSH1Q06224 779 aaPredicted RBP2.33□□□□□ -2.04
UBP1YDL122W SPN1Q06505 410 aaPredicted RBP2.33□□□□□ -2.04
UBP1YDL122W BSC6Q08280 497 aa2.33□□□□□ -2.04
UBP1YDL122W GLO4Q12320 285 aa2.33□□□□□ -2.04
UBP1YDL122W NAG1Q8TGN9 163 aa2.33□□□□□ -2.04
UBP1YDL122W SUC2P00724 532 aa2.32□□□□□ -2.04
UBP1YDL122W PGI1P12709 554 aaKnown RBP2.32□□□□□ -2.04
UBP1YDL122W GRR1P24814 1151 aa2.32□□□□□ -2.04
UBP1YDL122W AAR2P32357 355 aaPredicted RBP2.32□□□□□ -2.04
UBP1YDL122W MVD1P32377 396 aaKnown RBP2.32□□□□□ -2.04
UBP1YDL122W RPN12P32496 274 aa2.32□□□□□ -2.04
UBP1YDL122W CBF2P32504 956 aa2.32□□□□□ -2.04
UBP1YDL122W ADD66P36040 267 aa2.32□□□□□ -2.04
UBP1YDL122W TRZ1P36159 838 aaPredicted RBP2.32□□□□□ -2.04
UBP1YDL122W ECM13P38195 257 aa2.32□□□□□ -2.04
UBP1YDL122W ATG14P38270 344 aa2.32□□□□□ -2.04
UBP1YDL122W YBR225WP38321 900 aa2.32□□□□□ -2.04
UBP1YDL122W CRG1P38892 291 aaRIP-Chip data2.32□□□□□ -2.04not detected
UBP1YDL122W IES5P40060 125 aa2.32□□□□□ -2.04
UBP1YDL122W CIS3P47001 227 aa2.32□□□□□ -2.04
UBP1YDL122W HNT2P49775 206 aa2.32□□□□□ -2.04
UBP1YDL122W ASE1P50275 885 aa2.32□□□□□ -2.04
UBP1YDL122W TGL2P54857 326 aa2.32□□□□□ -2.04
UBP1YDL122W GCN5Q03330 439 aa2.32□□□□□ -2.04
UBP1YDL122W TRS130Q03660 1102 aa2.32□□□□□ -2.04
UBP1YDL122W SIZ1Q04195 904 aa2.32□□□□□ -2.04
UBP1YDL122W ECM22Q05958 814 aaPredicted RBP2.32□□□□□ -2.04
UBP1YDL122W MSB1P21339 1137 aaKnown RBP2.32□□□□□ -2.04
UBP1YDL122W PLC1P32383 869 aa2.32□□□□□ -2.04
UBP1YDL122W MRS6P32864 603 aaKnown RBP2.32□□□□□ -2.04
UBP1YDL122W MFT1P33441 392 aaKnown RBP2.32□□□□□ -2.04
UBP1YDL122W CTM1P38818 585 aa2.32□□□□□ -2.04
UBP1YDL122W EXO1P39875 702 aa2.32□□□□□ -2.04
UBP1YDL122W YIL108WP40483 696 aaKnown RBP2.32□□□□□ -2.04
UBP1YDL122W YNR063WP53749 607 aa2.32□□□□□ -2.04
UBP1YDL122W MTQ2Q03920 221 aaPredicted RBP2.32□□□□□ -2.04
UBP1YDL122W GAD1Q04792 585 aa2.32□□□□□ -2.04
UBP1YDL122W APC5Q08683 685 aa2.32□□□□□ -2.04
UBP1YDL122W ELG1Q12050 791 aa2.32□□□□□ -2.04
UBP1YDL122W GLE1Q12315 538 aa2.32□□□□□ -2.04
UBP1YDL122W OM45P16547 393 aa2.31□□□□□ -2.04
UBP1YDL122W RNR3P21672 869 aaKnown RBP2.31□□□□□ -2.04
UBP1YDL122W MPH1P40562 993 aa2.31□□□□□ -2.04
UBP1YDL122W UFE1P41834 346 aa2.31□□□□□ -2.04
UBP1YDL122W THI6P41835 540 aa2.31□□□□□ -2.04
UBP1YDL122W YJR124CP47159 448 aa2.31□□□□□ -2.04
UBP1YDL122W SPC105P53148 917 aa2.31□□□□□ -2.04
UBP1YDL122W BNI5P53890 448 aaKnown RBP2.31□□□□□ -2.04
UBP1YDL122W PEX25Q02969 394 aa2.31□□□□□ -2.04
UBP1YDL122W UTP5Q04177 643 aaKnown RBP2.31□□□□□ -2.04
UBP1YDL122W RRN11Q04712 507 aa2.31□□□□□ -2.04
UBP1YDL122W YPR071WQ12346 211 aa2.31□□□□□ -2.04
UBP1YDL122W CDC9P04819 755 aa2.31□□□□□ -2.04
UBP1YDL122W NOT3P06102 836 aaKnown RBP2.31□□□□□ -2.04
UBP1YDL122W HTS1P07263 546 aaKnown RBP2.31□□□□□ -2.04
UBP1YDL122W TY1A-LR4P0C2I8 440 aaKnown RBP2.31□□□□□ -2.04
UBP1YDL122W TY1A-DR6P0CX70 440 aa2.31□□□□□ -2.04
UBP1YDL122W TY1A-ER1P0CX71 440 aa2.31□□□□□ -2.04
UBP1YDL122W TY1A-LR2P0CX72 440 aa2.31□□□□□ -2.04
UBP1YDL122W TY1A-PLP0CX73 440 aa2.31□□□□□ -2.04
UBP1YDL122W TY1A-JR1P0CX74 440 aa2.31□□□□□ -2.04
UBP1YDL122W TY1A-LR3P0CX75 440 aa2.31□□□□□ -2.04
UBP1YDL122W TY1A-ML2P0CX76 440 aa2.31□□□□□ -2.04
UBP1YDL122W RPC53P25441 422 aa2.31□□□□□ -2.04
UBP1YDL122W NAM7P30771 971 aaKnown RBP2.31□□□□□ -2.04
UBP1YDL122W NTH1P32356 751 aa2.31□□□□□ -2.04
UBP1YDL122W PTH2P34222 208 aa2.31□□□□□ -2.04
UBP1YDL122W YEL1P34225 687 aa2.31□□□□□ -2.04
UBP1YDL122W RRP3P38712 501 aaKnown RBP2.31□□□□□ -2.04
UBP1YDL122W QNS1P38795 714 aaKnown RBP2.31□□□□□ -2.04
UBP1YDL122W AKR1P39010 764 aa2.31□□□□□ -2.04
UBP1YDL122W NEO1P40527 1151 aa2.31□□□□□ -2.04
UBP1YDL122W GAT1P43574 510 aa2.31□□□□□ -2.04
UBP1YDL122W GUS1P46655 708 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
UBP1YDL122W TRF5P48561 642 aaKnown RBP2.31□□□□□ -2.04
UBP1YDL122W NPY1P53164 384 aa2.31□□□□□ -2.04
UBP1YDL122W MET14Q02196 202 aa2.31□□□□□ -2.04
UBP1YDL122W HAS1Q03532 505 aaKnown RBP2.31□□□□□ -2.04
UBP1YDL122W GIR2Q03768 265 aaPredicted RBP2.31□□□□□ -2.04
UBP1YDL122W RKM2Q03942 479 aa2.31□□□□□ -2.04
UBP1YDL122W CSM3Q04659 317 aa2.31□□□□□ -2.04
UBP1YDL122W YDL218WQ07629 317 aa2.31□□□□□ -2.04
UBP1YDL122W BRE4Q07660 1125 aa2.31□□□□□ -2.04
UBP1YDL122W RCL1Q08096 367 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 78.5 ms