RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C NTH1P32356 751 aa4.11□□□□□ -1.75
PRP11YDL043C PUP2P32379 260 aa4.11□□□□□ -1.75
PRP11YDL043C MSS1P32559 526 aaPredicted RBP4.11□□□□□ -1.75
PRP11YDL043C DSS4P32601 143 aa4.11□□□□□ -1.75
PRP11YDL043C MRE11P32829 692 aa4.11□□□□□ -1.75
PRP11YDL043C MRPL40P36534 297 aa4.11□□□□□ -1.75
PRP11YDL043C YBL028CP38202 106 aa4.11□□□□□ -1.75
PRP11YDL043C OPY1P38271 328 aa4.11□□□□□ -1.75
PRP11YDL043C OTU2P38747 307 aaKnown RBP4.11□□□□□ -1.75
PRP11YDL043C BCD1P38772 366 aa4.11□□□□□ -1.75
PRP11YDL043C REV7P38927 245 aa4.11□□□□□ -1.75
PRP11YDL043C CAJ1P39101 391 aa4.11□□□□□ -1.75
PRP11YDL043C IDS2P46958 469 aa4.11□□□□□ -1.75
PRP11YDL043C MPS3P47069 682 aa4.11□□□□□ -1.75
PRP11YDL043C COS12P53053 380 aa4.11□□□□□ -1.75
PRP11YDL043C YKU80Q04437 629 aa4.11□□□□□ -1.75
PRP11YDL043C RNH1Q04740 348 aa4.11□□□□□ -1.75
PRP11YDL043C ATG38Q05789 226 aaKnown RBP4.11□□□□□ -1.75
PRP11YDL043C SMD2Q06217 110 aaKnown RBP4.11□□□□□ -1.75
PRP11YDL043C CDA2Q06703 312 aa4.11□□□□□ -1.75
PRP11YDL043C IZH3Q07959 543 aa4.11□□□□□ -1.75
PRP11YDL043C YPL191CQ08930 360 aa4.11□□□□□ -1.75
PRP11YDL043C SIR3P06701 978 aa4.1□□□□□ -1.75
PRP11YDL043C PET122P10355 254 aa4.1□□□□□ -1.75
PRP11YDL043C MER1P16523 270 aa4.1□□□□□ -1.75
PRP11YDL043C VPS34P22543 875 aa4.1□□□□□ -1.75
PRP11YDL043C POL4P25615 582 aa4.1□□□□□ -1.75
PRP11YDL043C PRE2P30656 287 aaKnown RBP4.1□□□□□ -1.75
PRP11YDL043C NUF2P33895 451 aa4.1□□□□□ -1.75
PRP11YDL043C RRP1P35178 278 aaPredicted RBP4.1□□□□□ -1.75
PRP11YDL043C SWH1P35845 1188 aa4.1□□□□□ -1.75
PRP11YDL043C ESL2P36168 1195 aa4.1□□□□□ -1.75
PRP11YDL043C PEX18P38855 283 aa4.1□□□□□ -1.75
PRP11YDL043C HRB1P38922 454 aaKnown RBP RIP-Chip data4.1□□□□□ -1.75not detected
PRP11YDL043C SDS3P40505 327 aa4.1□□□□□ -1.75
PRP11YDL043C BUL1P48524 976 aa4.1□□□□□ -1.75
PRP11YDL043C MNN10P50108 393 aaKnown RBP4.1□□□□□ -1.75
PRP11YDL043C PAN2P53010 1115 aaPredicted RBP4.1□□□□□ -1.75
PRP11YDL043C RBG2P53295 368 aaKnown RBP4.1□□□□□ -1.75
PRP11YDL043C YAP1802P53309 568 aa4.1□□□□□ -1.75
PRP11YDL043C CSL4P53859 292 aaPredicted RBP4.1□□□□□ -1.75
PRP11YDL043C TAP42Q04372 366 aa4.1□□□□□ -1.75
PRP11YDL043C NNT1Q05874 261 aa4.1□□□□□ -1.75
PRP11YDL043C ATG26Q06321 1198 aa4.1□□□□□ -1.75
PRP11YDL043C VAM6Q07468 1049 aa4.1□□□□□ -1.75
PRP11YDL043C IRC13Q08630 104 aa4.1□□□□□ -1.75
PRP11YDL043C PET494P07390 489 aaPredicted RBP4.09□□□□□ -1.75
PRP11YDL043C MET8P15807 274 aa4.09□□□□□ -1.75
PRP11YDL043C SEN2P16658 377 aa4.09□□□□□ -1.75
PRP11YDL043C PRP6P19735 899 aaPredicted RBP4.09□□□□□ -1.75
PRP11YDL043C GAS1P22146 559 aaKnown RBP4.09□□□□□ -1.75
PRP11YDL043C PHO84P25297 587 aaKnown RBP4.09□□□□□ -1.75
PRP11YDL043C SWC3P31376 625 aa4.09□□□□□ -1.75
PRP11YDL043C TOD6P34219 525 aa4.09□□□□□ -1.75
PRP11YDL043C DHR2P36009 735 aaPredicted RBP4.09□□□□□ -1.75
PRP11YDL043C CTP1P38152 299 aa4.09□□□□□ -1.75
PRP11YDL043C UBS1P38290 277 aa4.09□□□□□ -1.75
PRP11YDL043C EFM2P38347 419 aa4.09□□□□□ -1.75
PRP11YDL043C RRF1P38771 230 aa4.09□□□□□ -1.75
PRP11YDL043C SPT8P38915 602 aa4.09□□□□□ -1.75
PRP11YDL043C KHA1P40309 873 aa4.09□□□□□ -1.75
PRP11YDL043C YJR061WP40355 935 aa4.09□□□□□ -1.75
PRP11YDL043C IST3P40565 148 aaPredicted RBP4.09□□□□□ -1.75
PRP11YDL043C SIP4P46954 829 aa4.09□□□□□ -1.75
PRP11YDL043C YJL163CP46996 555 aa4.09□□□□□ -1.75
PRP11YDL043C ZAP1P47043 880 aa4.09□□□□□ -1.75
PRP11YDL043C SGM1P47166 707 aa4.09□□□□□ -1.75
PRP11YDL043C RAD17P48581 401 aa4.09□□□□□ -1.75
PRP11YDL043C MCM6P53091 1017 aaKnown RBP4.09□□□□□ -1.75
PRP11YDL043C BSC5P53755 489 aa4.09□□□□□ -1.75
PRP11YDL043C CLU1Q03690 1277 aaKnown RBP4.09□□□□□ -1.75
PRP11YDL043C GIS1Q03833 894 aa4.09□□□□□ -1.75
PRP11YDL043C RAD33Q04231 177 aa4.09□□□□□ -1.75
PRP11YDL043C HOF1Q05080 669 aa4.09□□□□□ -1.75
PRP11YDL043C GRC3Q07845 632 aa4.09□□□□□ -1.75
PRP11YDL043C CIR2Q08822 631 aa4.09□□□□□ -1.75
PRP11YDL043C NBP2Q12163 236 aa4.09□□□□□ -1.75
PRP11YDL043C TRM13Q12383 476 aa4.09□□□□□ -1.75
PRP11YDL043C RVB2Q12464 471 aaKnown RBP4.09□□□□□ -1.75
PRP11YDL043C SKM1Q12469 655 aa4.09□□□□□ -1.75
PRP11YDL043C RRP36Q12481 300 aaPredicted RBP4.09□□□□□ -1.75
PRP11YDL043C YBL111CQ3E7Y5 667 aa4.09□□□□□ -1.75
PRP11YDL043C YKL033W-AQ86ZR7 236 aa4.09□□□□□ -1.75
PRP11YDL043C RAD50P12753 1312 aa4.09□□□□□ -1.75
PRP11YDL043C YLR302CO13544 120 aa4.08□□□□□ -1.76
PRP11YDL043C YLR358CO13565 187 aa4.08□□□□□ -1.76
PRP11YDL043C RAD3P06839 778 aa4.08□□□□□ -1.76
PRP11YDL043C TY2A-LR1P0C2J4 438 aa4.08□□□□□ -1.76
PRP11YDL043C TY2A-FP0CX61 438 aa4.08□□□□□ -1.76
PRP11YDL043C TY2A-GR2P0CX62 438 aa4.08□□□□□ -1.76
PRP11YDL043C PMS1P14242 873 aa4.08□□□□□ -1.76
PRP11YDL043C TY2A-CP25383 438 aa4.08□□□□□ -1.76
PRP11YDL043C YCR061WP25639 631 aa4.08□□□□□ -1.76
PRP11YDL043C DAL80P26343 269 aa4.08□□□□□ -1.76
PRP11YDL043C GCD7P32502 381 aaPredicted RBP4.08□□□□□ -1.76
PRP11YDL043C HIS7P33734 552 aaKnown RBP4.08□□□□□ -1.76
PRP11YDL043C NUP120P35729 1037 aa4.08□□□□□ -1.76
PRP11YDL043C PHO11P35842 467 aa4.08□□□□□ -1.76
PRP11YDL043C MRPL7P36519 292 aa4.08□□□□□ -1.76
PRP11YDL043C NOP4P37838 685 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms