RNA–Protein interactions for RNA: YDL004W

ATP16, Transcript of Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, yeast

Gene ATP16, Length 483 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP16	YDL004W	COQ3	P27680	312 aa		4.24	□□□□□ -1.73
ATP16	YDL004W	PTP2	P29461	750 aa		4.24	□□□□□ -1.73
ATP16	YDL004W	SPC72	P39723	622 aa		4.24	□□□□□ -1.73
ATP16	YDL004W	MNT3	P40549	630 aa		4.24	□□□□□ -1.73
ATP16	YDL004W	YGR079W	P53249	370 aa		4.24	□□□□□ -1.73
ATP16	YDL004W	COP1	P53622	1201 aa	Known RBP	4.24	□□□□□ -1.73
ATP16	YDL004W	MPS1	P54199	764 aa		4.24	□□□□□ -1.73
ATP16	YDL004W	YAT1	P80235	687 aa		4.24	□□□□□ -1.73
ATP16	YDL004W	ATG21	Q02887	496 aa		4.24	□□□□□ -1.73
ATP16	YDL004W	IWR1	Q07532	353 aa	Predicted RBP	4.24	□□□□□ -1.73
ATP16	YDL004W	PFA4	Q12006	378 aa		4.24	□□□□□ -1.73
ATP16	YDL004W	YBR255C-A	Q3E776	120 aa		4.24	□□□□□ -1.73
ATP16	YDL004W	SWC3	P31376	625 aa		4.23	□□□□□ -1.73
ATP16	YDL004W	GSH1	P32477	678 aa		4.23	□□□□□ -1.73
ATP16	YDL004W	FUN12	P39730	1002 aa	Known RBP	4.23	□□□□□ -1.73
ATP16	YDL004W	UBP7	P40453	1071 aa		4.23	□□□□□ -1.73
ATP16	YDL004W	NOP2	P40991	618 aa	Known RBP	4.23	□□□□□ -1.73
ATP16	YDL004W	TAM41	P53230	385 aa		4.23	□□□□□ -1.73
ATP16	YDL004W	GAL4	P04386	881 aa		4.22	□□□□□ -1.73
ATP16	YDL004W	PTC6	P25646	442 aa		4.22	□□□□□ -1.73
ATP16	YDL004W	ARP2	P32381	391 aa	Known RBP	4.22	□□□□□ -1.73
ATP16	YDL004W	VPS27	P40343	622 aa	Known RBP	4.22	□□□□□ -1.73
ATP16	YDL004W	UBX6	P47049	396 aa		4.22	□□□□□ -1.73
ATP16	YDL004W	SCW4	P53334	386 aa	Known RBP	4.22	□□□□□ -1.73
ATP16	YDL004W	HER1	Q12276	1246 aa		4.22	□□□□□ -1.73
ATP16	YDL004W	SUL2	Q12325	893 aa		4.22	□□□□□ -1.73
ATP16	YDL004W	RVB2	Q12464	471 aa	Known RBP	4.22	□□□□□ -1.73
ATP16	YDL004W	ATP4	P05626	244 aa		4.21	□□□□□ -1.74
ATP16	YDL004W	MIS1	P09440	975 aa	Known RBP	4.21	□□□□□ -1.74
ATP16	YDL004W	URK1	P27515	501 aa		4.21	□□□□□ -1.74
ATP16	YDL004W	LAC1	P28496	418 aa		4.21	□□□□□ -1.74
ATP16	YDL004W	PCI8	P40512	444 aa		4.21	□□□□□ -1.74
ATP16	YDL004W	CPR6	P53691	371 aa	Known RBP	4.21	□□□□□ -1.74
ATP16	YDL004W	EIS1	Q05050	843 aa	Known RBP	4.21	□□□□□ -1.74
ATP16	YDL004W	LEA1	Q08963	238 aa	Predicted RBP	4.21	□□□□□ -1.74
ATP16	YDL004W	YPR089W	O13585	888 aa		4.2	□□□□□ -1.74
ATP16	YDL004W	PET122	P10355	254 aa		4.2	□□□□□ -1.74
ATP16	YDL004W	GCD7	P32502	381 aa	Predicted RBP	4.2	□□□□□ -1.74
ATP16	YDL004W	RPT3	P33298	428 aa	Known RBP	4.2	□□□□□ -1.74
ATP16	YDL004W	YBR138C	P38277	524 aa		4.2	□□□□□ -1.74
ATP16	YDL004W	YHL041W	P38730	149 aa		4.2	□□□□□ -1.74
ATP16	YDL004W	YMR124W	P39523	943 aa	Known RBP	4.2	□□□□□ -1.74
ATP16	YDL004W	CFD1	P40558	293 aa		4.2	□□□□□ -1.74
ATP16	YDL004W	SKP2	P42843	763 aa		4.2	□□□□□ -1.74
ATP16	YDL004W	ORC5	P50874	479 aa		4.2	□□□□□ -1.74
ATP16	YDL004W	YPR003C	P53394	754 aa		4.2	□□□□□ -1.74
ATP16	YDL004W	YDR109C	Q04585	715 aa		4.2	□□□□□ -1.74
ATP16	YDL004W	STP3	Q05937	343 aa		4.2	□□□□□ -1.74
ATP16	YDL004W	YOL057W	Q08225	711 aa		4.2	□□□□□ -1.74
ATP16	YDL004W	YER190C-B	P0CX94	160 aa		4.19	□□□□□ -1.74
ATP16	YDL004W	YEL077W-A	P0CX95	160 aa		4.19	□□□□□ -1.74
ATP16	YDL004W	YGR296C-B	P0CX96	160 aa		4.19	□□□□□ -1.74
ATP16	YDL004W	YPL283W-B	P0CX97	160 aa		4.19	□□□□□ -1.74
ATP16	YDL004W	YPR204C-A	P0CX98	160 aa		4.19	□□□□□ -1.74
ATP16	YDL004W	MSS51	P32335	436 aa		4.19	□□□□□ -1.74
ATP16	YDL004W	THI3	Q07471	609 aa		4.19	□□□□□ -1.74
ATP16	YDL004W	RRP6	Q12149	733 aa	Known RBP	4.19	□□□□□ -1.74
ATP16	YDL004W	GET3	Q12154	354 aa	Known RBP	4.19	□□□□□ -1.74
ATP16	YDL004W	ASK1	P35734	292 aa		4.18	□□□□□ -1.74
ATP16	YDL004W	HES1	P35843	434 aa		4.18	□□□□□ -1.74
ATP16	YDL004W	ZAP1	P47043	880 aa		4.18	□□□□□ -1.74
ATP16	YDL004W	MTG1	Q03151	367 aa	Predicted RBP	4.18	□□□□□ -1.74
ATP16	YDL004W	CIR2	Q08822	631 aa		4.18	□□□□□ -1.74
ATP16	YDL004W	PHO81	P17442	1178 aa		4.17	□□□□□ -1.74
ATP16	YDL004W	CLB4	P24871	460 aa		4.17	□□□□□ -1.74
ATP16	YDL004W	RFA2	P26754	273 aa	Known RBP	4.17	□□□□□ -1.74
ATP16	YDL004W	SCO2	P38072	301 aa		4.17	□□□□□ -1.74
ATP16	YDL004W	SPC97	P38863	823 aa		4.17	□□□□□ -1.74
ATP16	YDL004W	PUG1	P40100	303 aa		4.17	□□□□□ -1.74
ATP16	YDL004W	IMA1	P53051	589 aa		4.17	□□□□□ -1.74
ATP16	YDL004W	ECM22	Q05958	814 aa	Predicted RBP	4.17	□□□□□ -1.74
ATP16	YDL004W	RRI1	Q12468	440 aa		4.17	□□□□□ -1.74
ATP16	YDL004W	ARN1	P38731	627 aa		4.16	□□□□□ -1.74
ATP16	YDL004W	FSH1	P38777	243 aa	Known RBP	4.16	□□□□□ -1.74
ATP16	YDL004W	BUD16	P39988	312 aa		4.16	□□□□□ -1.74
ATP16	YDL004W	YJL107C	P42947	387 aa		4.16	□□□□□ -1.74
ATP16	YDL004W	RPL15B	P54780	204 aa	Predicted RBP	4.16	□□□□□ -1.74
ATP16	YDL004W	YPL068C	Q02749	293 aa		4.16	□□□□□ -1.74
ATP16	YDL004W	MRPL1	Q04599	285 aa		4.16	□□□□□ -1.74
ATP16	YDL004W	GTB1	Q04924	702 aa		4.16	□□□□□ -1.74
ATP16	YDL004W	BIK1	P11709	440 aa		4.15	□□□□□ -1.75
ATP16	YDL004W	APA1	P16550	321 aa	Known RBP	4.15	□□□□□ -1.75
ATP16	YDL004W	MGM1	P32266	881 aa		4.15	□□□□□ -1.75
ATP16	YDL004W	YIR016W	P40572	265 aa		4.15	□□□□□ -1.75
ATP16	YDL004W	CDC1	P40986	491 aa		4.15	□□□□□ -1.75
ATP16	YDL004W	YRB30	P53107	440 aa	Predicted RBP	4.15	□□□□□ -1.75
ATP16	YDL004W	YNL144C	P53907	740 aa		4.15	□□□□□ -1.75
ATP16	YDL004W	ADE16	P54113	591 aa	Known RBP	4.15	□□□□□ -1.75
ATP16	YDL004W	TRS130	Q03660	1102 aa		4.15	□□□□□ -1.75
ATP16	YDL004W	PDR8	Q06149	701 aa		4.15	□□□□□ -1.75
ATP16	YDL004W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
ATP16	YDL004W	SUI3	P09064	285 aa	Known RBP	4.14	□□□□□ -1.75
ATP16	YDL004W	CNA1	P23287	553 aa		4.14	□□□□□ -1.75
ATP16	YDL004W	RPT2	P40327	437 aa	Known RBP	4.14	□□□□□ -1.75
ATP16	YDL004W	FAF1	P40546	346 aa	Predicted RBP	4.14	□□□□□ -1.75
ATP16	YDL004W	ERR3	P42222	437 aa		4.14	□□□□□ -1.75
ATP16	YDL004W	IRC8	P47046	822 aa		4.14	□□□□□ -1.75
ATP16	YDL004W	MSY1	P48527	492 aa		4.14	□□□□□ -1.75
ATP16	YDL004W	YML003W	P0CF16	290 aa		4.13	□□□□□ -1.75
ATP16	YDL004W	NCP1	P16603	691 aa	Known RBP	4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms