RNA–Protein interactions for RNA: YCR012W

PGK1, Transcript of 3-phosphoglycerate kinase, yeast

Gene PGK1, Length 1,251 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PGK1	YCR012W	YAT2	P40017	923 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	FIR1	P40020	876 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	MGS1	P40151	587 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	CAB2	P40506	365 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	SNL1	P40548	159 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	INP51	P40559	946 aa	Known RBP	6.1	□□□□□ -1.43
PGK1	YCR012W	IAH1	P41734	238 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	FMP32	P43557	207 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	RSC8	P43609	557 aa	Known RBP	6.1	□□□□□ -1.43
PGK1	YCR012W	YJL132W	P47014	750 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	PEX31	P53203	462 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	BUD32	P53323	261 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	6.1	□□□□□ -1.43	not detected
PGK1	YCR012W	ASI2	P53895	289 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	ALG11	P53954	548 aa	Known RBP	6.1	□□□□□ -1.43
PGK1	YCR012W	INA17	Q02888	182 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	MUB1	Q03162	620 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	EAR1	Q03212	550 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	SKY1	Q03656	742 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	DOT1	Q04089	582 aa	Known RBP	6.1	□□□□□ -1.43
PGK1	YCR012W	FAR10	Q06001	478 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	JIP5	Q06214	492 aa	Predicted RBP	6.1	□□□□□ -1.43
PGK1	YCR012W	VIK1	Q12045	647 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	LDB17	Q12342	491 aa		6.1	□□□□□ -1.43
PGK1	YCR012W	EFG1	Q3E705	233 aa	Known RBP	6.1	□□□□□ -1.43
PGK1	YCR012W	HSH49	Q99181	213 aa	Predicted RBP	6.1	□□□□□ -1.43
PGK1	YCR012W	LAA1	P39526	2014 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	STE2	D6VTK4	431 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	SUI3	P09064	285 aa	Known RBP	6.09	□□□□□ -1.43
PGK1	YCR012W	GLN3	P18494	730 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	SEC15	P22224	910 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	NDI1	P32340	513 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	HEM12	P32347	362 aa	Predicted RBP	6.09	□□□□□ -1.43
PGK1	YCR012W	SMI1	P32566	505 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	BEM3	P32873	1128 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	HSP78	P33416	811 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	EAP1	P36041	632 aa	Known RBP	6.09	□□□□□ -1.43
PGK1	YCR012W	SPC42	P36094	363 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	FLR1	P38124	548 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	LDH1	P38139	375 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	PPE1	P38796	400 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	HPM1	P40481	377 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	SEC28	P40509	296 aa	Known RBP	6.09	□□□□□ -1.43
PGK1	YCR012W	MAF1	P41910	395 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	ISM1	P48526	1002 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	ASN2	P49090	572 aa	Known RBP	6.09	□□□□□ -1.43
PGK1	YCR012W	YNL011C	P53980	444 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	YVH1	Q02256	364 aa	Known RBP	6.09	□□□□□ -1.43
PGK1	YCR012W	YMR155W	Q03795	547 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	DYN3	Q04949	312 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	IES3	Q12345	250 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	CTF3	Q12748	733 aa		6.09	□□□□□ -1.43
PGK1	YCR012W	SEM1	O94742	89 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	MAS2	P11914	482 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	INO1	P11986	533 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	DPB2	P24482	689 aa	Predicted RBP	6.08	□□□□□ -1.44
PGK1	YCR012W	ATP7	P30902	174 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	GCD11	P32481	527 aa	Known RBP	6.08	□□□□□ -1.44
PGK1	YCR012W	AEP1	P32493	518 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	GDA1	P32621	518 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	NPL6	P32832	435 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	TIM23	P32897	222 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	SEC66	P33754	206 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	DEF1	P35732	738 aa	Known RBP	6.08	□□□□□ -1.44
PGK1	YCR012W	KDX1	P36005	433 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	AMN1	P38285	549 aa	Predicted RBP	6.08	□□□□□ -1.44
PGK1	YCR012W	ARN1	P38731	627 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	YHR182W	P38870	785 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	UTP9	P38882	575 aa	Known RBP	6.08	□□□□□ -1.44
PGK1	YCR012W	PIK1	P39104	1066 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	MEF2	P39677	819 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	NUP60	P39705	539 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	YER186C	P40101	306 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	AIM20	P40451	204 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	UBP7	P40453	1071 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	BNA3	P47039	444 aa	Known RBP	6.08	□□□□□ -1.44
PGK1	YCR012W	VPS62	P53285	467 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	SLG1	P54867	378 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	REX2	P54964	269 aa	Known RBP	6.08	□□□□□ -1.44
PGK1	YCR012W	SKI8	Q02793	397 aa	Predicted RBP	6.08	□□□□□ -1.44
PGK1	YCR012W	NAN1	Q02931	896 aa	Known RBP	6.08	□□□□□ -1.44
PGK1	YCR012W	YDR179W-A	Q03983	463 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	HPT1	Q04178	221 aa	Known RBP	6.08	□□□□□ -1.44
PGK1	YCR012W	APC5	Q08683	685 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	MSH5	Q12175	901 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	DBP10	Q12389	995 aa	Known RBP	6.08	□□□□□ -1.44
PGK1	YCR012W	NHA1	Q99271	985 aa		6.08	□□□□□ -1.44
PGK1	YCR012W	COX6	P00427	148 aa		6.07	□□□□□ -1.44
PGK1	YCR012W	ADE4	P04046	510 aa	Known RBP	6.07	□□□□□ -1.44
PGK1	YCR012W	ATP12	P22135	325 aa		6.07	□□□□□ -1.44
PGK1	YCR012W	CNA1	P23287	553 aa		6.07	□□□□□ -1.44
PGK1	YCR012W	ADY2	P25613	283 aa		6.07	□□□□□ -1.44
PGK1	YCR012W	GAC1	P28006	793 aa		6.07	□□□□□ -1.44
PGK1	YCR012W	AIM26	P32858	118 aa		6.07	□□□□□ -1.44
PGK1	YCR012W	RGT1	P32862	1170 aa		6.07	□□□□□ -1.44
PGK1	YCR012W	RPT1	P33299	467 aa	Known RBP	6.07	□□□□□ -1.44
PGK1	YCR012W	TIF3	P34167	436 aa	Known RBP	6.07	□□□□□ -1.44
PGK1	YCR012W	MRP8	P35719	219 aa		6.07	□□□□□ -1.44
PGK1	YCR012W	ASK1	P35734	292 aa		6.07	□□□□□ -1.44
PGK1	YCR012W	SRP68	P38687	599 aa	Known RBP	6.07	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms