RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W VMA2P16140 517 aaKnown RBP3.12□□□□□ -1.91
SWD3YBR175W PWP1P21304 576 aaKnown RBP3.12□□□□□ -1.91
SWD3YBR175W TRX1P22217 103 aaKnown RBP3.12□□□□□ -1.91
SWD3YBR175W PRE8P23639 250 aa3.12□□□□□ -1.91
SWD3YBR175W ERG8P24521 451 aa3.12□□□□□ -1.91
SWD3YBR175W STE50P25344 346 aa3.12□□□□□ -1.91
SWD3YBR175W CAP1P28495 268 aaKnown RBP3.12□□□□□ -1.91
SWD3YBR175W PMI40P29952 429 aaKnown RBP3.12□□□□□ -1.91
SWD3YBR175W RPN2P32565 945 aaKnown RBP3.12□□□□□ -1.91
SWD3YBR175W GCS1P35197 352 aa3.12□□□□□ -1.91
SWD3YBR175W STB6P36085 766 aa3.12□□□□□ -1.91
SWD3YBR175W APT2P36973 181 aa3.12□□□□□ -1.91
SWD3YBR175W CDS1P38221 457 aa3.12□□□□□ -1.91
SWD3YBR175W SIC1P38634 284 aa3.12□□□□□ -1.91
SWD3YBR175W GDI1P39958 451 aaKnown RBP3.12□□□□□ -1.91
SWD3YBR175W MAM1P40065 302 aa3.12□□□□□ -1.91
SWD3YBR175W YJL055WP47044 245 aa3.12□□□□□ -1.91
SWD3YBR175W MSE1P48525 536 aa3.12□□□□□ -1.91
SWD3YBR175W YDL183CP48569 320 aa3.12□□□□□ -1.91
SWD3YBR175W VPS4P52917 437 aa3.12□□□□□ -1.91
SWD3YBR175W TAM41P53230 385 aa3.12□□□□□ -1.91
SWD3YBR175W ART5P53244 586 aaKnown RBP3.12□□□□□ -1.91
SWD3YBR175W OGG1P53397 376 aaPredicted RBP3.12□□□□□ -1.91
SWD3YBR175W PRP42Q03776 544 aaKnown RBP3.12□□□□□ -1.91
SWD3YBR175W HMO1Q03973 246 aaKnown RBP3.12□□□□□ -1.91
SWD3YBR175W GYL1Q04322 720 aa3.12□□□□□ -1.91
SWD3YBR175W MCM21Q06675 368 aa3.12□□□□□ -1.91
SWD3YBR175W WHI4Q07655 649 aaKnown RBP3.12□□□□□ -1.91
SWD3YBR175W NFI1Q12216 726 aa3.12□□□□□ -1.91
SWD3YBR175W NTO1Q12311 748 aa3.12□□□□□ -1.91
SWD3YBR175W GRX6Q12438 231 aa3.12□□□□□ -1.91
SWD3YBR175W YRF1-4O13559 1382 aa3.12□□□□□ -1.91
SWD3YBR175W ATP2P00830 511 aaKnown RBP3.11□□□□□ -1.91
SWD3YBR175W STF1P01098 86 aa3.11□□□□□ -1.91
SWD3YBR175W RPS9BP05755 195 aaKnown RBP3.11□□□□□ -1.91
SWD3YBR175W CTT1P06115 562 aa3.11□□□□□ -1.91
SWD3YBR175W APE1P14904 514 aa3.11□□□□□ -1.91
SWD3YBR175W TUP1P16649 713 aa3.11□□□□□ -1.91
SWD3YBR175W KAR3P17119 729 aa3.11□□□□□ -1.91
SWD3YBR175W GLK1P17709 500 aaKnown RBP3.11□□□□□ -1.91
SWD3YBR175W RNR1P21524 888 aaKnown RBP3.11□□□□□ -1.91
SWD3YBR175W SED4P25365 1065 aa3.11□□□□□ -1.91
SWD3YBR175W RRP7P25368 297 aaPredicted RBP3.11□□□□□ -1.91
SWD3YBR175W PUP2P32379 260 aa3.11□□□□□ -1.91
SWD3YBR175W STE14P32584 239 aa3.11□□□□□ -1.91
SWD3YBR175W ALY1P36117 915 aa3.11□□□□□ -1.91
SWD3YBR175W APE3P37302 537 aaKnown RBP3.11□□□□□ -1.91
SWD3YBR175W KTR3P38130 404 aaPredicted RBP3.11□□□□□ -1.91
SWD3YBR175W STB5P38699 743 aa3.11□□□□□ -1.91
SWD3YBR175W YHR112CP38716 378 aa3.11□□□□□ -1.91
SWD3YBR175W RRF1P38771 230 aa3.11□□□□□ -1.91
SWD3YBR175W SFB3P38810 929 aa3.11□□□□□ -1.91
SWD3YBR175W CRG1P38892 291 aaRIP-Chip data3.11□□□□□ -1.91 RIP-Chip
SWD3YBR175W YEL057CP39983 233 aa3.11□□□□□ -1.91
SWD3YBR175W MET18P40469 1032 aa3.11□□□□□ -1.91
SWD3YBR175W SUN4P53616 420 aa3.11□□□□□ -1.91
SWD3YBR175W YPL108WQ02872 168 aaPredicted RBP3.11□□□□□ -1.91
SWD3YBR175W PKH1Q03407 766 aa3.11□□□□□ -1.91
SWD3YBR175W SKG3Q06315 1026 aa3.11□□□□□ -1.91
SWD3YBR175W AIM6Q07716 390 aa3.11□□□□□ -1.91
SWD3YBR175W RIX7Q07844 837 aaKnown RBP3.11□□□□□ -1.91
SWD3YBR175W AIM41Q12032 185 aa3.11□□□□□ -1.91
SWD3YBR175W TGL5Q12043 749 aa3.11□□□□□ -1.91
SWD3YBR175W ECM3Q99252 613 aa3.11□□□□□ -1.91
SWD3YBR175W VCX1Q99385 411 aa3.11□□□□□ -1.91
SWD3YBR175W MMS1Q06211 1407 aa3.1□□□□□ -1.91
SWD3YBR175W YLR415CO13578 112 aa3.1□□□□□ -1.91
SWD3YBR175W THR1P17423 357 aaKnown RBP3.1□□□□□ -1.91
SWD3YBR175W PRP4P20053 465 aaKnown RBP3.1□□□□□ -1.91
SWD3YBR175W CLB1P24868 471 aa3.1□□□□□ -1.91
SWD3YBR175W CLB3P24870 427 aa3.1□□□□□ -1.91
SWD3YBR175W KIN82P25341 720 aa3.1□□□□□ -1.91
SWD3YBR175W PRP45P28004 379 aaPredicted RBP3.1□□□□□ -1.91
SWD3YBR175W DEF1P35732 738 aaKnown RBP3.1□□□□□ -1.91
SWD3YBR175W UBP13P38187 747 aa3.1□□□□□ -1.91
SWD3YBR175W REG2P38232 338 aa3.1□□□□□ -1.91
SWD3YBR175W EHT1P38295 451 aa3.1□□□□□ -1.91
SWD3YBR175W FTH1P38310 465 aa3.1□□□□□ -1.91
SWD3YBR175W SMF1P38925 575 aa3.1□□□□□ -1.91
SWD3YBR175W MSS4P38994 779 aa3.1□□□□□ -1.91
SWD3YBR175W LYS9P38999 446 aa3.1□□□□□ -1.91
SWD3YBR175W ECM1P39715 212 aa3.1□□□□□ -1.91
SWD3YBR175W JHD1P40034 492 aa3.1□□□□□ -1.91
SWD3YBR175W FTR1P40088 404 aa3.1□□□□□ -1.91
SWD3YBR175W SSU1P41930 458 aa3.1□□□□□ -1.91
SWD3YBR175W NOP9P47077 666 aaKnown RBP3.1□□□□□ -1.91
SWD3YBR175W MDE1P47095 244 aa3.1□□□□□ -1.91
SWD3YBR175W AAD10P47182 288 aa3.1□□□□□ -1.91
SWD3YBR175W GLO1P50107 326 aa3.1□□□□□ -1.91
SWD3YBR175W OCA1P50946 238 aaPredicted RBP3.1□□□□□ -1.91
SWD3YBR175W NCS2P53923 493 aaPredicted RBP3.1□□□□□ -1.91
SWD3YBR175W SEC5P89102 971 aa3.1□□□□□ -1.91
SWD3YBR175W OAZ1Q02803 292 aa3.1□□□□□ -1.91
SWD3YBR175W HOT1Q03213 719 aa3.1□□□□□ -1.91
SWD3YBR175W ECM22Q05958 814 aaPredicted RBP3.1□□□□□ -1.91
SWD3YBR175W TMA16Q08687 178 aa3.1□□□□□ -1.91
SWD3YBR175W NUS1Q12063 375 aa3.1□□□□□ -1.91
SWD3YBR175W REX3Q12090 404 aa3.1□□□□□ -1.91
SWD3YBR175W POM34Q12445 299 aa3.1□□□□□ -1.91
SWD3YBR175W FRE6Q12473 712 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms