RNA–Protein interactions for RNA: YBR048W

RPS11B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS11B, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS11B	YBR048W	TMA16	Q08687	178 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	BMS1	Q08965	1183 aa	Known RBP	4.1	□□□□□ -1.75
RPS11B	YBR048W	SWT1	Q12104	458 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	TRM13	Q12383	476 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	YBR126W-A	Q8TGU7	68 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	HSP82	P02829	709 aa	Known RBP	4.09	□□□□□ -1.75
RPS11B	YBR048W	PPR1	P07272	904 aa	Predicted RBP	4.09	□□□□□ -1.75
RPS11B	YBR048W	ALG7	P07286	448 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	YML003W	P0CF16	290 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	PRE8	P23639	250 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	TFC3	P34111	1160 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	PEX5	P35056	612 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	APL3	P38065	1025 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
RPS11B	YBR048W	CIR1	P42940	261 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	YGR151C	P53287	111 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	REG1	Q00816	1014 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	NGL2	Q03264	515 aa	Known RBP	4.09	□□□□□ -1.75
RPS11B	YBR048W	SYF1	Q04048	859 aa	Predicted RBP	4.09	□□□□□ -1.75
RPS11B	YBR048W	UFO1	Q04511	668 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	CRF1	Q04930	467 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	PSK2	Q08217	1101 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	CTI6	Q08923	506 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	BAG7	Q12128	409 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	SNU66	Q12420	587 aa	Predicted RBP	4.09	□□□□□ -1.75
RPS11B	YBR048W	PGA3	Q12746	312 aa	Known RBP	4.09	□□□□□ -1.75
RPS11B	YBR048W	YOR111W	Q99210	232 aa		4.09	□□□□□ -1.75
RPS11B	YBR048W	FUR1	P18562	216 aa	Known RBP	4.08	□□□□□ -1.76
RPS11B	YBR048W	SRB5	P32585	307 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	LOT5	P34234	306 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	DEF1	P35732	738 aa	Known RBP	4.08	□□□□□ -1.76
RPS11B	YBR048W	ELF1	P36053	145 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	YPT10	P38146	199 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	YBL029W	P38201	376 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	YHR097C	P38809	366 aa	Known RBP	4.08	□□□□□ -1.76
RPS11B	YBR048W	DJP1	P40564	432 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	YML6	P51998	286 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	IMO32	P53219	342 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	YNR061C	P53747	219 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	INN1	P53901	409 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	INA17	Q02888	182 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	MRI1	Q06489	411 aa	Known RBP	4.08	□□□□□ -1.76
RPS11B	YBR048W	URN1	Q06525	465 aa	Known RBP	4.08	□□□□□ -1.76
RPS11B	YBR048W	GRC3	Q07845	632 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	AIM39	Q08223	395 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	RCN2	Q12044	265 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	TGS1	Q12052	315 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	RRG1	Q12167	365 aa	Predicted RBP	4.08	□□□□□ -1.76
RPS11B	YBR048W	RKI1	Q12189	258 aa		4.08	□□□□□ -1.76
RPS11B	YBR048W	PRS5	Q12265	496 aa	Known RBP	4.08	□□□□□ -1.76
RPS11B	YBR048W	PNO1	Q99216	274 aa	Known RBP	4.08	□□□□□ -1.76
RPS11B	YBR048W	CET1	O13297	549 aa	Predicted RBP	4.07	□□□□□ -1.76
RPS11B	YBR048W	AAC1	P04710	309 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	ARG3	P05150	338 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	SUI3	P09064	285 aa	Known RBP	4.07	□□□□□ -1.76
RPS11B	YBR048W	YCK1	P23291	538 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	LCB1	P25045	558 aa	Known RBP	4.07	□□□□□ -1.76
RPS11B	YBR048W	OCA4	P25366	362 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	ERG3	P32353	365 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	ALY1	P36117	915 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	YNG2	P38806	282 aa	Known RBP	4.07	□□□□□ -1.76
RPS11B	YBR048W	PHM8	P40025	321 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	LSM5	P40089	93 aa	Known RBP	4.07	□□□□□ -1.76
RPS11B	YBR048W	LAS21	P40367	830 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	AXL1	P40851	1208 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	GPD2	P41911	440 aa	Known RBP	4.07	□□□□□ -1.76
RPS11B	YBR048W	RPN11	P43588	306 aa	Known RBP	4.07	□□□□□ -1.76
RPS11B	YBR048W	MRX6	P48564	524 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	DIP5	P53388	608 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	BUD17	P53727	317 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	SSL2	Q00578	843 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	YPL071C	Q02864	156 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	SXM1	Q04175	944 aa	Known RBP	4.07	□□□□□ -1.76
RPS11B	YBR048W	ENT4	Q07872	247 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	YPL216W	Q08964	1102 aa		4.07	□□□□□ -1.76
RPS11B	YBR048W	CHO2	P05374	869 aa	Known RBP	4.06	□□□□□ -1.76
RPS11B	YBR048W	RED1	P14291	827 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	PDX1	P16451	410 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	STE4	P18851	423 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	ROX1	P25042	368 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	HRR25	P29295	494 aa	Known RBP	4.06	□□□□□ -1.76
RPS11B	YBR048W	KES1	P35844	434 aa	Known RBP	4.06	□□□□□ -1.76
RPS11B	YBR048W	MAM1	P40065	302 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	RGI2	P40188	164 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	ARG2	P40360	574 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	PFK26	P40433	827 aa	Known RBP	4.06	□□□□□ -1.76
RPS11B	YBR048W	SPO22	P40511	975 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	ROK1	P45818	564 aa	Predicted RBP	4.06	□□□□□ -1.76
RPS11B	YBR048W	YIP4	P53093	235 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	MFM1	Q02783	413 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	RAD30	Q04049	632 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	YLR352W	Q06479	807 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	YDL073W	Q07454	984 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	RIX7	Q07844	837 aa	Known RBP	4.06	□□□□□ -1.76
RPS11B	YBR048W	CRT10	Q08226	957 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	USV1	Q12132	391 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	NTO1	Q12311	748 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	YER175W-A	Q8TGU4	54 aa		4.06	□□□□□ -1.76
RPS11B	YBR048W	HOM3	P10869	527 aa		4.05	□□□□□ -1.76
RPS11B	YBR048W	KAR3	P17119	729 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms