RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W MFM1Q02783 413 aa2.33□□□□□ -2.04
SNC1YAL030W MUB1Q03162 620 aa2.33□□□□□ -2.04
SNC1YAL030W FCP1Q03254 732 aa2.33□□□□□ -2.04
SNC1YAL030W TAF11Q04226 346 aa2.33□□□□□ -2.04
SNC1YAL030W TDA9Q04545 1251 aa2.33□□□□□ -2.04
SNC1YAL030W CRF1Q04930 467 aa2.33□□□□□ -2.04
SNC1YAL030W YLR287CQ05881 355 aa2.33□□□□□ -2.04
SNC1YAL030W YDL073WQ07454 984 aa2.33□□□□□ -2.04
SNC1YAL030W PSK2Q08217 1101 aa2.33□□□□□ -2.04
SNC1YAL030W NMD4Q12129 218 aa2.33□□□□□ -2.04
SNC1YAL030W TAH18Q12181 623 aa2.33□□□□□ -2.04
SNC1YAL030W YER175W-AQ8TGU4 54 aa2.33□□□□□ -2.04
SNC1YAL030W YBR126W-AQ8TGU7 68 aa2.33□□□□□ -2.04
SNC1YAL030W YOR111WQ99210 232 aa2.33□□□□□ -2.04
SNC1YAL030W PNO1Q99216 274 aaKnown RBP2.33□□□□□ -2.04
SNC1YAL030W AAC1P04710 309 aa2.32□□□□□ -2.04
SNC1YAL030W CHO2P05374 869 aaKnown RBP2.32□□□□□ -2.04
SNC1YAL030W SEC53P07283 254 aaKnown RBP2.32□□□□□ -2.04
SNC1YAL030W YML003WP0CF16 290 aa2.32□□□□□ -2.04
SNC1YAL030W STE4P18851 423 aa2.32□□□□□ -2.04
SNC1YAL030W ERG8P24521 451 aa2.32□□□□□ -2.04
SNC1YAL030W OCA4P25366 362 aa2.32□□□□□ -2.04
SNC1YAL030W CNE1P27825 502 aa2.32□□□□□ -2.04
SNC1YAL030W SRB5P32585 307 aa2.32□□□□□ -2.04
SNC1YAL030W GMH1P36125 273 aa2.32□□□□□ -2.04
SNC1YAL030W PPS1P38148 807 aa2.32□□□□□ -2.04
SNC1YAL030W UBS1P38290 277 aa2.32□□□□□ -2.04
SNC1YAL030W KSP1P38691 1029 aaKnown RBP2.32□□□□□ -2.04
SNC1YAL030W YHR097CP38809 366 aaKnown RBP2.32□□□□□ -2.04
SNC1YAL030W PSD1P39006 500 aa2.32□□□□□ -2.04
SNC1YAL030W BDH2P39713 417 aa2.32□□□□□ -2.04
SNC1YAL030W LYS14P40971 790 aa2.32□□□□□ -2.04
SNC1YAL030W ARF3P40994 183 aaRIP-Chip data2.32□□□□□ -2.04not detected
SNC1YAL030W PHO23P50947 330 aa2.32□□□□□ -2.04
SNC1YAL030W YIP4P53093 235 aa2.32□□□□□ -2.04
SNC1YAL030W DIP5P53388 608 aa2.32□□□□□ -2.04
SNC1YAL030W ARE2P53629 642 aaKnown RBP2.32□□□□□ -2.04
SNC1YAL030W BUD17P53727 317 aa2.32□□□□□ -2.04
SNC1YAL030W VPS75P53853 264 aa2.32□□□□□ -2.04
SNC1YAL030W MDG1P53885 366 aa2.32□□□□□ -2.04
SNC1YAL030W INA17Q02888 182 aa2.32□□□□□ -2.04
SNC1YAL030W NGL2Q03264 515 aaKnown RBP2.32□□□□□ -2.04
SNC1YAL030W YDR179W-AQ03983 463 aa2.32□□□□□ -2.04
SNC1YAL030W MRI1Q06489 411 aaKnown RBP2.32□□□□□ -2.04
SNC1YAL030W RIX7Q07844 837 aaKnown RBP2.32□□□□□ -2.04
SNC1YAL030W ENT4Q07872 247 aa2.32□□□□□ -2.04
SNC1YAL030W TMA16Q08687 178 aa2.32□□□□□ -2.04
SNC1YAL030W SWT1Q12104 458 aa2.32□□□□□ -2.04
SNC1YAL030W BAG7Q12128 409 aa2.32□□□□□ -2.04
SNC1YAL030W HUA2Q12134 243 aa2.32□□□□□ -2.04
SNC1YAL030W PRS5Q12265 496 aaKnown RBP2.32□□□□□ -2.04
SNC1YAL030W SFI1Q12369 946 aa2.32□□□□□ -2.04
SNC1YAL030W RNQ1P25367 405 aa2.31□□□□□ -2.04
SNC1YAL030W CDC15P27636 974 aa2.31□□□□□ -2.04
SNC1YAL030W YKL050CP35736 922 aa2.31□□□□□ -2.04
SNC1YAL030W ALY1P36117 915 aa2.31□□□□□ -2.04
SNC1YAL030W YBL029WP38201 376 aa2.31□□□□□ -2.04
SNC1YAL030W SUL1P38359 859 aa2.31□□□□□ -2.04
SNC1YAL030W ERC1P38767 581 aa2.31□□□□□ -2.04
SNC1YAL030W PIH1P38768 344 aa2.31□□□□□ -2.04
SNC1YAL030W YNG2P38806 282 aaKnown RBP2.31□□□□□ -2.04
SNC1YAL030W ARO9P38840 513 aaPredicted RBP2.31□□□□□ -2.04
SNC1YAL030W NPR2P39923 615 aa2.31□□□□□ -2.04
SNC1YAL030W LAS21P40367 830 aa2.31□□□□□ -2.04
SNC1YAL030W PFK26P40433 827 aaKnown RBP2.31□□□□□ -2.04
SNC1YAL030W NDC80P40460 691 aa2.31□□□□□ -2.04
SNC1YAL030W PMT6P42934 759 aa2.31□□□□□ -2.04
SNC1YAL030W CIR1P42940 261 aa2.31□□□□□ -2.04
SNC1YAL030W RPN11P43588 306 aaKnown RBP2.31□□□□□ -2.04
SNC1YAL030W RMD8P43620 662 aa2.31□□□□□ -2.04
SNC1YAL030W IMO32P53219 342 aa2.31□□□□□ -2.04
SNC1YAL030W YGR079WP53249 370 aa2.31□□□□□ -2.04
SNC1YAL030W PIL1P53252 339 aaKnown RBP2.31□□□□□ -2.04
SNC1YAL030W YNR061CP53747 219 aa2.31□□□□□ -2.04
SNC1YAL030W INN1P53901 409 aa2.31□□□□□ -2.04
SNC1YAL030W YNL092WP53934 400 aa2.31□□□□□ -2.04
SNC1YAL030W MFB1Q04922 465 aa2.31□□□□□ -2.04
SNC1YAL030W SPN1Q06505 410 aaPredicted RBP2.31□□□□□ -2.04
SNC1YAL030W VIP1Q06685 1146 aaKnown RBP2.31□□□□□ -2.04
SNC1YAL030W YOL073CQ08232 322 aa2.31□□□□□ -2.04
SNC1YAL030W CTI6Q08923 506 aa2.31□□□□□ -2.04
SNC1YAL030W RCN2Q12044 265 aa2.31□□□□□ -2.04
SNC1YAL030W LAM4P38800 1345 aa2.31□□□□□ -2.04
SNC1YAL030W SUI3P09064 285 aaKnown RBP2.3□□□□□ -2.04
SNC1YAL030W WHI2P12611 486 aa2.3□□□□□ -2.04
SNC1YAL030W RED1P14291 827 aa2.3□□□□□ -2.04
SNC1YAL030W CKA1P15790 372 aa2.3□□□□□ -2.04
SNC1YAL030W KAR3P17119 729 aa2.3□□□□□ -2.04
SNC1YAL030W PWP1P21304 576 aaKnown RBP2.3□□□□□ -2.04
SNC1YAL030W AMD2P22580 549 aa2.3□□□□□ -2.04
SNC1YAL030W ROX1P25042 368 aa2.3□□□□□ -2.04
SNC1YAL030W LCB1P25045 558 aaKnown RBP2.3□□□□□ -2.04
SNC1YAL030W PDB1P32473 366 aaKnown RBP2.3□□□□□ -2.04
SNC1YAL030W TRM2P33753 639 aa2.3□□□□□ -2.04
SNC1YAL030W BLI1P35727 113 aa2.3□□□□□ -2.04
SNC1YAL030W HES1P35843 434 aa2.3□□□□□ -2.04
SNC1YAL030W GLG1P36143 616 aa2.3□□□□□ -2.04
SNC1YAL030W RPF2P36160 344 aaKnown RBP2.3□□□□□ -2.04
SNC1YAL030W YPT10P38146 199 aa2.3□□□□□ -2.04
SNC1YAL030W AXL1P40851 1208 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 101.7 ms