RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 COPS6Q7L5N1 327 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 RHPN1Q8TCX5 695 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 PCDH11XQ9BZA7 1347 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 PCDH11YQ9BZA8 1340 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 ZC4H2Q9NQZ6 224 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 SBNO2Q9Y2G9 1366 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 APOBRQ0VD83 1088 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 PPP2R5DQ14738 602 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 TRIM75PA6NK02 468 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 KRT5P13647 590 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 KRT9P35527 623 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 EIF6P56537 245 aaKnown RBP10.99□□□□□ -0.65
COL4A6-210ENST00000621266 PDE4BQ07343 736 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 NOX5Q96PH1 765 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 ZC3H12CQ9C0D7 883 aaKnown RBP10.99□□□□□ -0.65
COL4A6-210ENST00000621266 FAM204AQ9H8W3 233 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 TRPM2O94759 1503 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 GOLGA8KD6RF30 607 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 INPP1P49441 399 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 KLHL14Q9P2G3 628 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 TBX22Q9Y458 520 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 PCDHB15Q9Y5E8 787 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.99□□□□□ -0.65
COL4A6-210ENST00000621266 HDAC1Q13547 482 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-210ENST00000621266 CFAP61Q8NHU2 1237 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 TESK2Q96S53 571 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 FAN1Q9Y2M0 1017 aa10.99□□□□□ -0.65
COL4A6-210ENST00000621266 CTNNA1P35221 906 aaKnown RBP10.98□□□□□ -0.65
COL4A6-210ENST00000621266 ZNF772Q68DY9 489 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-210ENST00000621266 KSR2Q6VAB6 950 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 CCDC87Q9NVE4 849 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 CEP170Q5SW79 1584 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 SERPINB6P35237 376 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 HVCN1Q96D96 273 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 MEIS3Q99687 375 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 IMPG2Q9BZV3 1241 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 Q9H521 79 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 DDX41Q9UJV9 622 aaKnown RBP10.98□□□□□ -0.65
COL4A6-210ENST00000621266 CHD1O14646 1710 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 CALM1P0DP23 149 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 CALM2P0DP24 149 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 CALM3P0DP25 149 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 IRX4P78413 519 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 MTX1Q13505 466 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 MTMR3Q13615 1198 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 MTHFSDQ2M296 383 aaKnown RBP10.98□□□□□ -0.65
COL4A6-210ENST00000621266 PDZD8Q8NEN9 1154 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 PIK3R5Q8WYR1 880 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 MAPK8IP1Q9UQF2 711 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 ATF5Q9Y2D1 282 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-210ENST00000621266 RGS16O15492 202 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-210ENST00000621266 TBC1D8BQ0IIM8 1120 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 CNBD1Q8NA66 436 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 HELBQ8NG08 1087 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-210ENST00000621266 ZFYVE9O95405 1425 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 TBC1D8O95759 1140 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 GSTO1P78417 241 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 PHEXP78562 749 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 SEPT8Q92599 483 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 SPDL1Q96EA4 605 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 CSRNP2Q9H175 543 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 PDE11AQ9HCR9 933 aa10.98□□□□□ -0.65
COL4A6-210ENST00000621266 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.98□□□□□ -0.65
COL4A6-210ENST00000621266 TROVE2P10155 538 aaKnown RBP eCLIP10.97□□□□□ -0.652e-8■■■■■ 38.3
COL4A6-210ENST00000621266 KRT2P35908 639 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 ASIC2Q16515 512 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 SLF1Q9BQI6 1058 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 CLSTN2Q9H4D0 955 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 LARSQ9P2J5 1176 aaKnown RBP10.97□□□□□ -0.65
COL4A6-210ENST00000621266 PTPDC1A2A3K4 754 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 APOEP02649 317 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 TNFAIP3P21580 790 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 TEX11Q8IYF3 940 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 C8orf58Q8NAV2 365 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 HINFPQ9BQA5 517 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 STX8Q9UNK0 236 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 ELP1O95163 1332 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 PDE1AP54750 535 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 BRD3Q15059 726 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 ANLNQ9NQW6 1124 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 GRM8O00222 908 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 RSPH3Q86UC2 560 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 MRPL50Q8N5N7 158 aaKnown RBP10.97□□□□□ -0.65
COL4A6-210ENST00000621266 YTHDC2Q9H6S0 1430 aaKnown RBP10.97□□□□□ -0.65
COL4A6-210ENST00000621266 RXRAP19793 462 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 IFT88Q13099 833 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 TRIM14Q14142 442 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 UBL4BQ8N7F7 174 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 JRKLQ9Y4A0 524 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 ARHGEF12Q9NZN5 1544 aa10.97□□□□□ -0.65
COL4A6-210ENST00000621266 SEC31AO94979 1220 aaKnown RBP10.96□□□□□ -0.65
COL4A6-210ENST00000621266 NAPAP54920 295 aa10.96□□□□□ -0.65
COL4A6-210ENST00000621266 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.96□□□□□ -0.65
COL4A6-210ENST00000621266 KIFC2Q96AC6 838 aa10.96□□□□□ -0.65
COL4A6-210ENST00000621266 MAN1A1P33908 653 aa10.96□□□□□ -0.65
COL4A6-210ENST00000621266 SPATS2Q86XZ4 545 aaKnown RBP10.96□□□□□ -0.65
COL4A6-210ENST00000621266 AFAP1L2Q8N4X5 818 aa10.96□□□□□ -0.65
COL4A6-210ENST00000621266 VPS37BQ9H9H4 285 aa10.96□□□□□ -0.65
COL4A6-210ENST00000621266 IMPACTQ9P2X3 320 aa10.96□□□□□ -0.65
COL4A6-210ENST00000621266 ANKRD44Q8N8A2 993 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms