RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 PKN1Q16512 942 aa16.06■□□□□ 0.16
CBWD1-226ENST00000618061 CATIPQ7Z7H3 387 aa16.06■□□□□ 0.16
CBWD1-226ENST00000618061 QTRT2Q9H974 415 aaKnown RBP16.06■□□□□ 0.16
CBWD1-226ENST00000618061 PCDHB6Q9Y5E3 794 aa16.06■□□□□ 0.16
CBWD1-226ENST00000618061 V9GY48 417 aaPredicted RBP16.06■□□□□ 0.16
CBWD1-226ENST00000618061 UBR3Q6ZT12 1888 aa16.06■□□□□ 0.16
CBWD1-226ENST00000618061 ONECUT3O60422 494 aaPredicted RBP16.06■□□□□ 0.16
CBWD1-226ENST00000618061 PPP6R2O75170 966 aa16.06■□□□□ 0.16
CBWD1-226ENST00000618061 LDHBP07195 334 aaKnown RBP16.06■□□□□ 0.16
CBWD1-226ENST00000618061 SLC3A2P08195 630 aaKnown RBP16.06■□□□□ 0.16
CBWD1-226ENST00000618061 SYKP43405 635 aa16.06■□□□□ 0.16
CBWD1-226ENST00000618061 LRMPQ12912 555 aa16.06■□□□□ 0.16
CBWD1-226ENST00000618061 SAFBQ15424 915 aaKnown RBP eCLIP16.06■□□□□ 0.16
CBWD1-226ENST00000618061 EARS2Q5JPH6 523 aaKnown RBP16.06■□□□□ 0.16
CBWD1-226ENST00000618061 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.06■□□□□ 0.16
CBWD1-226ENST00000618061 TROAPQ12815 778 aa16.05■□□□□ 0.16
CBWD1-226ENST00000618061 NOM1Q5C9Z4 860 aaKnown RBP16.05■□□□□ 0.16
CBWD1-226ENST00000618061 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
CBWD1-226ENST00000618061 XDHP47989 1333 aa16.05■□□□□ 0.16
CBWD1-226ENST00000618061 LAMB1P07942 1786 aa16.05■□□□□ 0.16
CBWD1-226ENST00000618061 UFL1O94874 794 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 FGRP09769 529 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 USP5P45974 858 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 FUT2Q10981 343 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 NOLC1Q14978 699 aaKnown RBP eCLIP16.04■□□□□ 0.16
CBWD1-226ENST00000618061 CCDC144BQ3MJ40 725 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 MTA3Q9BTC8 594 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 KIAA1551Q9HCM1 1747 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 ATP8A2Q9NTI2 1148 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 PDS5AQ29RF7 1337 aaKnown RBP16.04■□□□□ 0.16
CBWD1-226ENST00000618061 MAST2Q6P0Q8 1798 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 TSPY2A6NKD2 308 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 FOXN1O15353 648 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 VEGFAP15692 232 aaPredicted RBP16.04■□□□□ 0.16
CBWD1-226ENST00000618061 AKAP17AQ02040 695 aaKnown RBP16.04■□□□□ 0.16
CBWD1-226ENST00000618061 PNOCQ13519 176 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 DNTTIP2Q5QJE6 756 aaKnown RBP16.04■□□□□ 0.16
CBWD1-226ENST00000618061 CEP57L1Q8IYX8 460 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 CLIP2Q9UDT6 1046 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 SAP30BPQ9UHR5 308 aaKnown RBP16.04■□□□□ 0.16
CBWD1-226ENST00000618061 MTMR7Q9Y216 660 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 HPSEQ9Y251 543 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 LEMD3Q9Y2U8 911 aa16.04■□□□□ 0.16
CBWD1-226ENST00000618061 DDR1Q08345 913 aa16.03■□□□□ 0.16
CBWD1-226ENST00000618061 LONRF3Q496Y0 759 aa16.03■□□□□ 0.16
CBWD1-226ENST00000618061 RESP18Q5W5W9 173 aa16.03■□□□□ 0.16
CBWD1-226ENST00000618061 SLC44A5Q8NCS7 719 aa16.03■□□□□ 0.16
CBWD1-226ENST00000618061 TGFBRAP1Q8WUH2 860 aa16.03■□□□□ 0.16
CBWD1-226ENST00000618061 RNF26Q9BY78 433 aaPredicted RBP16.03■□□□□ 0.16
CBWD1-226ENST00000618061 GOLGA6L6A8MZA4 724 aa16.03■□□□□ 0.16
CBWD1-226ENST00000618061 WNT7AO00755 349 aa16.03■□□□□ 0.16
CBWD1-226ENST00000618061 ARID5BQ14865 1188 aa16.03■□□□□ 0.16
CBWD1-226ENST00000618061 ZRSR1Q15695 479 aaKnown RBP16.03■□□□□ 0.16
CBWD1-226ENST00000618061 SRBD1Q8N5C6 995 aaKnown RBP16.03■□□□□ 0.16
CBWD1-226ENST00000618061 JMYQ8N9B5 988 aa16.03■□□□□ 0.16
CBWD1-226ENST00000618061 RGS22Q8NE09 1264 aa16.03■□□□□ 0.16
CBWD1-226ENST00000618061 CERKQ8TCT0 537 aa16.03■□□□□ 0.16
CBWD1-226ENST00000618061 FOXP1Q9H334 677 aaPredicted RBP16.03■□□□□ 0.16
CBWD1-226ENST00000618061 ARPP21Q9UBL0 812 aaPredicted RBP16.03■□□□□ 0.16
CBWD1-226ENST00000618061 DLEC1Q9Y238 1755 aa16.03■□□□□ 0.16
CBWD1-226ENST00000618061 ADAMTS3O15072 1205 aa16.02■□□□□ 0.16
CBWD1-226ENST00000618061 CAVIN2O95810 425 aa16.02■□□□□ 0.16
CBWD1-226ENST00000618061 ST5P78524 1137 aa16.02■□□□□ 0.16
CBWD1-226ENST00000618061 SPTY2D1Q68D10 685 aaPredicted RBP16.02■□□□□ 0.16
CBWD1-226ENST00000618061 ZNF804AQ7Z570 1209 aa16.02■□□□□ 0.16
CBWD1-226ENST00000618061 MAPKAPK5Q8IW41 473 aa16.02■□□□□ 0.16
CBWD1-226ENST00000618061 WDR66Q8TBY9 1149 aa16.02■□□□□ 0.16
CBWD1-226ENST00000618061 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.02■□□□□ 0.16
CBWD1-226ENST00000618061 BRWD3Q6RI45 1802 aa16.02■□□□□ 0.15
CBWD1-226ENST00000618061 ORC4O43929 436 aa16.02■□□□□ 0.15
CBWD1-226ENST00000618061 TFAP4Q01664 338 aa16.02■□□□□ 0.15
CBWD1-226ENST00000618061 KRI1Q8N9T8 703 aaKnown RBP16.02■□□□□ 0.15
CBWD1-226ENST00000618061 CD209Q9NNX6 404 aa16.02■□□□□ 0.15
CBWD1-226ENST00000618061 USP17L3A6NCW0 530 aa16.01■□□□□ 0.15
CBWD1-226ENST00000618061 USP17L4A6NCW7 530 aa16.01■□□□□ 0.15
CBWD1-226ENST00000618061 CUTAO60888 179 aa16.01■□□□□ 0.15
CBWD1-226ENST00000618061 PLCD1P51178 756 aa16.01■□□□□ 0.15
CBWD1-226ENST00000618061 RCAN1P53805 252 aa16.01■□□□□ 0.15
CBWD1-226ENST00000618061 PDE4BQ07343 736 aa16.01■□□□□ 0.15
CBWD1-226ENST00000618061 RCSD1Q6JBY9 416 aa16.01■□□□□ 0.15
CBWD1-226ENST00000618061 USP49Q70CQ1 688 aa16.01■□□□□ 0.15
CBWD1-226ENST00000618061 USP17L1Q7RTZ2 530 aa16.01■□□□□ 0.15
CBWD1-226ENST00000618061 IL17RBQ9NRM6 502 aa16.01■□□□□ 0.15
CBWD1-226ENST00000618061 POLLQ9UGP5 575 aa16.01■□□□□ 0.15
CBWD1-226ENST00000618061 MKRN1Q9UHC7 482 aaKnown RBP16.01■□□□□ 0.15
CBWD1-226ENST00000618061 FBXO2Q9UK22 296 aaPredicted RBP16.01■□□□□ 0.15
CBWD1-226ENST00000618061 KCNH3Q9ULD8 1083 aa16.01■□□□□ 0.15
CBWD1-226ENST00000618061 PRPF3O43395 683 aaKnown RBP16■□□□□ 0.15
CBWD1-226ENST00000618061 ADRA2BP18089 450 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 NLRP12P59046 1061 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 CRY2Q49AN0 593 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 SBK1Q52WX2 424 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 C12orf60Q5U649 245 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 OLFM4Q6UX06 510 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 TMTC3Q6ZXV5 915 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 METTL16Q86W50 562 aaKnown RBP16■□□□□ 0.15
CBWD1-226ENST00000618061 FOXP4Q8IVH2 680 aaPredicted RBP16■□□□□ 0.15
CBWD1-226ENST00000618061 PROM2Q8N271 834 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 KIAA1524Q8TCG1 905 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 PHF20Q9BVI0 1012 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms