RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 KIAA2012Q0VF49 1180 aa15.72■□□□□ 0.11
NEK3-205ENST00000610828 TROAPQ12815 778 aa15.72■□□□□ 0.11
NEK3-205ENST00000610828 NR5A1Q13285 461 aa15.72■□□□□ 0.11
NEK3-205ENST00000610828 IQCB1Q15051 598 aa15.72■□□□□ 0.11
NEK3-205ENST00000610828 ZRSR1Q15695 479 aaKnown RBP15.72■□□□□ 0.11
NEK3-205ENST00000610828 SBK1Q52WX2 424 aa15.72■□□□□ 0.11
NEK3-205ENST00000610828 FOXP1Q9H334 677 aaPredicted RBP15.72■□□□□ 0.11
NEK3-205ENST00000610828 LAMB1P07942 1786 aa15.72■□□□□ 0.11
NEK3-205ENST00000610828 hCG_1642624A0A1W2PR95 340 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 TSPY2A6NKD2 308 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 GOLGA6L6A8MZA4 724 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 PLEKHA8P1O95397 391 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 CALM1P0DP23 149 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 CALM2P0DP24 149 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 CALM3P0DP25 149 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 GRIK5Q16478 980 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 CLIC6Q96NY7 704 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 RBM28Q9NW13 759 aaKnown RBP15.71■□□□□ 0.11
NEK3-205ENST00000610828 KIAA1468Q9P260 1216 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 MYH6P13533 1939 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 BECN2A8MW95 431 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 OFD1O75665 1012 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 SYKP43405 635 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 SHC4Q6S5L8 630 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 SH3RF3Q8TEJ3 882 aaPredicted RBP15.71■□□□□ 0.11
NEK3-205ENST00000610828 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.71■□□□□ 0.11
NEK3-205ENST00000610828 GGA1Q9UJY5 639 aa15.71■□□□□ 0.11
NEK3-205ENST00000610828 KIAA1551Q9HCM1 1747 aa15.71■□□□□ 0.1
NEK3-205ENST00000610828 DDAH1O94760 285 aa15.7■□□□□ 0.1
NEK3-205ENST00000610828 XBP1P17861 261 aa15.7■□□□□ 0.1
NEK3-205ENST00000610828 TOB1P50616 345 aaPredicted RBP15.7■□□□□ 0.1
NEK3-205ENST00000610828 GSTO1P78417 241 aa15.7■□□□□ 0.1
NEK3-205ENST00000610828 DDR1Q08345 913 aa15.7■□□□□ 0.1
NEK3-205ENST00000610828 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.7■□□□□ 0.1
NEK3-205ENST00000610828 CEP57L1Q8IYX8 460 aa15.7■□□□□ 0.1
NEK3-205ENST00000610828 OXER1Q8TDS5 423 aa15.7■□□□□ 0.1
NEK3-205ENST00000610828 NOL10Q9BSC4 688 aaKnown RBP15.7■□□□□ 0.1
NEK3-205ENST00000610828 VPS54Q9P1Q0 977 aa15.7■□□□□ 0.1
NEK3-205ENST00000610828 BAG3O95817 575 aa15.7■□□□□ 0.1
NEK3-205ENST00000610828 ATP2B4P23634 1241 aa15.7■□□□□ 0.1
NEK3-205ENST00000610828 RILPL1Q5EBL4 403 aa15.7■□□□□ 0.1
NEK3-205ENST00000610828 C15orf52Q6ZUT6 534 aaKnown RBP15.7■□□□□ 0.1
NEK3-205ENST00000610828 DRC7Q8IY82 874 aa15.7■□□□□ 0.1
NEK3-205ENST00000610828 CD209Q9NNX6 404 aa15.7■□□□□ 0.1
NEK3-205ENST00000610828 V9GY48 417 aaPredicted RBP15.7■□□□□ 0.1
NEK3-205ENST00000610828 ZNF75DP51815 510 aa15.69■□□□□ 0.1
NEK3-205ENST00000610828 FUT2Q10981 343 aa15.69■□□□□ 0.1
NEK3-205ENST00000610828 PKN1Q16512 942 aa15.69■□□□□ 0.1
NEK3-205ENST00000610828 PLA2G4DQ86XP0 818 aa15.69■□□□□ 0.1
NEK3-205ENST00000610828 CTCFLQ8NI51 663 aaPredicted RBP15.69■□□□□ 0.1
NEK3-205ENST00000610828 NAT10Q9H0A0 1025 aaKnown RBP15.69■□□□□ 0.1
NEK3-205ENST00000610828 DLEC1Q9Y238 1755 aa15.69■□□□□ 0.1
NEK3-205ENST00000610828 BRWD3Q6RI45 1802 aa15.69■□□□□ 0.1
NEK3-205ENST00000610828 POLRMTO00411 1230 aaKnown RBP15.69■□□□□ 0.1
NEK3-205ENST00000610828 PRPF3O43395 683 aaKnown RBP15.69■□□□□ 0.1
NEK3-205ENST00000610828 CUTAO60888 179 aa15.69■□□□□ 0.1
NEK3-205ENST00000610828 BBOX1O75936 387 aa15.69■□□□□ 0.1
NEK3-205ENST00000610828 TXNRD1Q16881 649 aa15.69■□□□□ 0.1
NEK3-205ENST00000610828 C12orf60Q5U649 245 aa15.69■□□□□ 0.1
NEK3-205ENST00000610828 RESP18Q5W5W9 173 aa15.69■□□□□ 0.1
NEK3-205ENST00000610828 KRI1Q8N9T8 703 aaKnown RBP15.69■□□□□ 0.1
NEK3-205ENST00000610828 TGFBRAP1Q8WUH2 860 aa15.69■□□□□ 0.1
NEK3-205ENST00000610828 MKRN1Q9UHC7 482 aaKnown RBP15.69■□□□□ 0.1
NEK3-205ENST00000610828 HPSEQ9Y251 543 aa15.69■□□□□ 0.1
NEK3-205ENST00000610828 BIN1O00499 593 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 IGSF3O75054 1194 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 ATP2B1P20020 1258 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 TMTC3Q6ZXV5 915 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 DHX40Q8IX18 779 aaKnown RBP15.68■□□□□ 0.1
NEK3-205ENST00000610828 SHISA4Q96DD7 197 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 CABP5Q9NP86 173 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 TPM3P06753 285 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 LDHCP07864 332 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 DPCR1Q3MIW9 517 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 AMOTL1Q8IY63 956 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 PROM2Q8N271 834 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 AOPEPQ8N6M6 819 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 DYNLL2Q96FJ2 89 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 TIGD1Q96MW7 591 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 PCDHB6Q9Y5E3 794 aa15.68■□□□□ 0.1
NEK3-205ENST00000610828 TFAP4Q01664 338 aa15.67■□□□□ 0.1
NEK3-205ENST00000610828 SPECC1Q5M775 1068 aa15.67■□□□□ 0.1
NEK3-205ENST00000610828 MKNK2Q9HBH9 465 aa15.67■□□□□ 0.1
NEK3-205ENST00000610828 POLLQ9UGP5 575 aa15.67■□□□□ 0.1
NEK3-205ENST00000610828 C6orf229H3BNL8 230 aa15.67■□□□□ 0.1
NEK3-205ENST00000610828 IL1R1P14778 569 aa15.67■□□□□ 0.1
NEK3-205ENST00000610828 HOXA10P31260 410 aaPredicted RBP15.67■□□□□ 0.1
NEK3-205ENST00000610828 PPP4CP60510 307 aa15.67■□□□□ 0.1
NEK3-205ENST00000610828 SRBD1Q8N5C6 995 aaKnown RBP15.67■□□□□ 0.1
NEK3-205ENST00000610828 TBC1D16Q8TBP0 767 aa15.67■□□□□ 0.1
NEK3-205ENST00000610828 PIBF1Q8WXW3 757 aa15.67■□□□□ 0.1
NEK3-205ENST00000610828 PHF20Q9BVI0 1012 aa15.67■□□□□ 0.1
NEK3-205ENST00000610828 KCNF1Q9H3M0 494 aa15.67■□□□□ 0.1
NEK3-205ENST00000610828 PTGS1P23219 599 aa15.66■□□□□ 0.1
NEK3-205ENST00000610828 KRT2P35908 639 aa15.66■□□□□ 0.1
NEK3-205ENST00000610828 RCSD1Q6JBY9 416 aa15.66■□□□□ 0.1
NEK3-205ENST00000610828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.66■□□□□ 0.1
NEK3-205ENST00000610828 MAPKAPK5Q8IW41 473 aa15.66■□□□□ 0.1
NEK3-205ENST00000610828 RTFDC1Q9BY42 306 aaPredicted RBP15.66■□□□□ 0.1
NEK3-205ENST00000610828 KCNH3Q9ULD8 1083 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms