RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 STAG1Q8WVM7 1258 aa19.5■□□□□ 0.71
EWSR1-221ENST00000610553 STRN4Q9NRL3 753 aa19.5■□□□□ 0.71
EWSR1-221ENST00000610553 A0A1B0GTH6 734 aa19.49■□□□□ 0.71
EWSR1-221ENST00000610553 SEC31AO94979 1220 aaKnown RBP19.49■□□□□ 0.71
EWSR1-221ENST00000610553 DEXIO95424 95 aa19.49■□□□□ 0.71
EWSR1-221ENST00000610553 PLCD1P51178 756 aa19.49■□□□□ 0.71
EWSR1-221ENST00000610553 NR5A1Q13285 461 aa19.49■□□□□ 0.71
EWSR1-221ENST00000610553 NR1I3Q14994 352 aa19.49■□□□□ 0.71
EWSR1-221ENST00000610553 MFSD6Q6ZSS7 791 aa19.49■□□□□ 0.71
EWSR1-221ENST00000610553 ARMT1Q9H993 441 aa19.49■□□□□ 0.71
EWSR1-221ENST00000610553 SAMSN1Q9NSI8 373 aaKnown RBP19.49■□□□□ 0.71
EWSR1-221ENST00000610553 BCORQ6W2J9 1755 aa19.49■□□□□ 0.71
EWSR1-221ENST00000610553 TBC1D8O95759 1140 aa19.48■□□□□ 0.71
EWSR1-221ENST00000610553 ERCC5P28715 1186 aaPredicted RBP19.48■□□□□ 0.71
EWSR1-221ENST00000610553 RASGRF1Q13972 1273 aa19.48■□□□□ 0.71
EWSR1-221ENST00000610553 KANK3Q6NY19 840 aa19.48■□□□□ 0.71
EWSR1-221ENST00000610553 SEC31BQ9NQW1 1179 aa19.48■□□□□ 0.71
EWSR1-221ENST00000610553 RCAN1P53805 252 aa19.48■□□□□ 0.71
EWSR1-221ENST00000610553 MAP3K12Q12852 859 aa19.48■□□□□ 0.71
EWSR1-221ENST00000610553 CC2D1AQ6P1N0 951 aaPredicted RBP19.48■□□□□ 0.71
EWSR1-221ENST00000610553 CRACR2BQ8N4Y2 399 aaPredicted RBP19.48■□□□□ 0.71
EWSR1-221ENST00000610553 EPC1Q9H2F5 836 aa19.48■□□□□ 0.71
EWSR1-221ENST00000610553 PDE8AO60658 829 aa19.47■□□□□ 0.71
EWSR1-221ENST00000610553 SASH3O75995 380 aa19.47■□□□□ 0.71
EWSR1-221ENST00000610553 WTAPQ15007 396 aa19.47■□□□□ 0.71
EWSR1-221ENST00000610553 SART3Q15020 963 aaKnown RBP19.47■□□□□ 0.71
EWSR1-221ENST00000610553 USP49Q70CQ1 688 aa19.47■□□□□ 0.71
EWSR1-221ENST00000610553 APTXQ7Z2E3 356 aaKnown RBP19.47■□□□□ 0.71
EWSR1-221ENST00000610553 PIGBQ92521 554 aa19.47■□□□□ 0.71
EWSR1-221ENST00000610553 MTA3Q9BTC8 594 aa19.47■□□□□ 0.71
EWSR1-221ENST00000610553 CEP131Q9UPN4 1083 aa19.47■□□□□ 0.71
EWSR1-221ENST00000610553 MROH5Q6ZUA9 1318 aa19.47■□□□□ 0.71
EWSR1-221ENST00000610553 NUP98P52948 1817 aa19.47■□□□□ 0.71
EWSR1-221ENST00000610553 ROBO1Q9Y6N7 1651 aa19.47■□□□□ 0.71
EWSR1-221ENST00000610553 ERICH4A6NGS2 130 aa19.47■□□□□ 0.71
EWSR1-221ENST00000610553 ZKSCAN3Q9BRR0 538 aa19.47■□□□□ 0.71
EWSR1-221ENST00000610553 DESI2Q9BSY9 194 aa19.47■□□□□ 0.71
EWSR1-221ENST00000610553 CSRNP2Q9H175 543 aa19.47■□□□□ 0.71
EWSR1-221ENST00000610553 TRMT112Q9UI30 125 aaKnown RBP19.47■□□□□ 0.71
EWSR1-221ENST00000610553 OXER1Q8TDS5 423 aa19.46■□□□□ 0.71
EWSR1-221ENST00000610553 PANX2Q96RD6 677 aa19.46■□□□□ 0.71
EWSR1-221ENST00000610553 MRPL44Q9H9J2 332 aaKnown RBP19.46■□□□□ 0.71
EWSR1-221ENST00000610553 MYH6P13533 1939 aa19.46■□□□□ 0.71
EWSR1-221ENST00000610553 CCDC196A0A1B0GTZ2 297 aa19.46■□□□□ 0.71
EWSR1-221ENST00000610553 PRKAB2O43741 272 aa19.46■□□□□ 0.71
EWSR1-221ENST00000610553 RABGGTAQ92696 567 aa19.46■□□□□ 0.71
EWSR1-221ENST00000610553 DHX58Q96C10 678 aa19.46■□□□□ 0.71
EWSR1-221ENST00000610553 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.46■□□□□ 0.71
EWSR1-221ENST00000610553 PNPLA7Q6ZV29 1317 aa19.46■□□□□ 0.71
EWSR1-221ENST00000610553 PLCH1Q4KWH8 1693 aa19.45■□□□□ 0.7
EWSR1-221ENST00000610553 MTF1Q14872 753 aa19.45■□□□□ 0.7
EWSR1-221ENST00000610553 CT47A1Q5JQC4 288 aaPredicted RBP19.45■□□□□ 0.7
EWSR1-221ENST00000610553 RRP12Q5JTH9 1297 aaKnown RBP19.45■□□□□ 0.7
EWSR1-221ENST00000610553 TEX35Q5T0J7 233 aa19.45■□□□□ 0.7
EWSR1-221ENST00000610553 CMTR1Q8N1G2 835 aaKnown RBP19.45■□□□□ 0.7
EWSR1-221ENST00000610553 CCDC82Q8N4S0 544 aa19.45■□□□□ 0.7
EWSR1-221ENST00000610553 HELBQ8NG08 1087 aaPredicted RBP19.45■□□□□ 0.7
EWSR1-221ENST00000610553 AKR1B15C9JRZ8 316 aaPredicted RBP19.45■□□□□ 0.7
EWSR1-221ENST00000610553 CCDC175P0C221 793 aa19.45■□□□□ 0.7
EWSR1-221ENST00000610553 LCORLQ8N3X6 602 aa19.45■□□□□ 0.7
EWSR1-221ENST00000610553 ITGB4P16144 1822 aa19.44■□□□□ 0.7
EWSR1-221ENST00000610553 SOWAHDA6NJG2 315 aa19.44■□□□□ 0.7
EWSR1-221ENST00000610553 SLC5A1P13866 664 aa19.44■□□□□ 0.7
EWSR1-221ENST00000610553 GNAT2P19087 354 aa19.44■□□□□ 0.7
EWSR1-221ENST00000610553 TDO2P48775 406 aa19.44■□□□□ 0.7
EWSR1-221ENST00000610553 KARSQ15046 597 aaKnown RBP19.44■□□□□ 0.7
EWSR1-221ENST00000610553 ZNF654Q8IZM8 581 aa19.44■□□□□ 0.7
EWSR1-221ENST00000610553 TMTC2Q8N394 836 aa19.44■□□□□ 0.7
EWSR1-221ENST00000610553 FANCBQ8NB91 859 aa19.44■□□□□ 0.7
EWSR1-221ENST00000610553 SHISA4Q96DD7 197 aa19.44■□□□□ 0.7
EWSR1-221ENST00000610553 AATFQ9NY61 560 aaKnown RBP eCLIP19.44■□□□□ 0.7
EWSR1-221ENST00000610553 A0A087X0B3 334 aa19.43■□□□□ 0.7
EWSR1-221ENST00000610553 ERICH2A1L162 156 aa19.43■□□□□ 0.7
EWSR1-221ENST00000610553 TEX33O43247 280 aa19.43■□□□□ 0.7
EWSR1-221ENST00000610553 PBX1P40424 430 aa19.43■□□□□ 0.7
EWSR1-221ENST00000610553 CCDC12Q8WUD4 166 aaPredicted RBP19.43■□□□□ 0.7
EWSR1-221ENST00000610553 GOLGA1Q92805 767 aa19.43■□□□□ 0.7
EWSR1-221ENST00000610553 PARD6BQ9BYG5 372 aa19.43■□□□□ 0.7
EWSR1-221ENST00000610553 NACAP1Q9BZK3 213 aa19.43■□□□□ 0.7
EWSR1-221ENST00000610553 CABP5Q9NP86 173 aa19.43■□□□□ 0.7
EWSR1-221ENST00000610553 SLIT2O94813 1529 aa19.43■□□□□ 0.7
EWSR1-221ENST00000610553 SYNRGQ9UMZ2 1314 aa19.43■□□□□ 0.7
EWSR1-221ENST00000610553 CUL4BQ13620 913 aa19.43■□□□□ 0.7
EWSR1-221ENST00000610553 SPATA1Q5VX52 437 aa19.43■□□□□ 0.7
EWSR1-221ENST00000610553 NAA15Q9BXJ9 866 aaKnown RBP19.43■□□□□ 0.7
EWSR1-221ENST00000610553 TOMM22Q9NS69 142 aa19.43■□□□□ 0.7
EWSR1-221ENST00000610553 BCL9LQ86UU0 1499 aa19.43■□□□□ 0.7
EWSR1-221ENST00000610553 CDKAL1Q5VV42 579 aa19.42■□□□□ 0.7
EWSR1-221ENST00000610553 SH3RF1Q7Z6J0 888 aa19.42■□□□□ 0.7
EWSR1-221ENST00000610553 RNF26Q9BY78 433 aaPredicted RBP19.42■□□□□ 0.7
EWSR1-221ENST00000610553 ARFGAP3Q9NP61 516 aa19.42■□□□□ 0.7
EWSR1-221ENST00000610553 CALCOCO1Q9P1Z2 691 aa19.42■□□□□ 0.7
EWSR1-221ENST00000610553 ADD3Q9UEY8 706 aaKnown RBP19.42■□□□□ 0.7
EWSR1-221ENST00000610553 ADGRG1Q9Y653 693 aa19.42■□□□□ 0.7
EWSR1-221ENST00000610553 SLC4A4Q9Y6R1 1079 aa19.42■□□□□ 0.7
EWSR1-221ENST00000610553 CYP19A1P11511 503 aaPredicted RBP19.42■□□□□ 0.7
EWSR1-221ENST00000610553 CD44P16070 742 aaKnown RBP19.42■□□□□ 0.7
EWSR1-221ENST00000610553 ATP2B1P20020 1258 aa19.42■□□□□ 0.7
EWSR1-221ENST00000610553 RAD9BQ6WBX8 426 aa19.42■□□□□ 0.7
EWSR1-221ENST00000610553 SLC4A9Q96Q91 983 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms