RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 RANBP17Q9H2T7 1088 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-217ENST00000591595 BATF3Q9NR55 127 aa13.81□□□□□ -0.2
SMARCA4-217ENST00000591595 CDR1P51861 262 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 CASP8Q14790 479 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 CCDC178Q5BJE1 867 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 AOPEPQ8N6M6 819 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 KBTBD3Q8NAB2 608 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 OSBPL5Q9H0X9 879 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 PPP1R12BO60237 982 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 CAPRIN2Q6IMN6 1127 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 STOX1Q6ZVD7 989 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 ANKLE2Q86XL3 938 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 CCDC150Q8NCX0 1101 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 BCAS4Q8TDM0 211 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 SMARCC1Q92922 1105 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 LZTS2Q9BRK4 669 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 NAT10Q9H0A0 1025 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 SLC52A2Q9HAB3 445 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 RTEL1Q9NZ71 1219 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 COL15A1P39059 1388 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 ZNF609O15014 1411 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 PFKFB2O60825 505 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 TATP17735 454 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 SFPQP23246 707 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 TRIM42Q8IWZ5 723 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 FAM163AQ96GL9 167 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 HAUS7Q99871 368 aa13.8□□□□□ -0.2
SMARCA4-217ENST00000591595 H7C1W4 665 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 ZEB2O60315 1214 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 SHOX2O60902 331 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 USP5P45974 858 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 SMTNP53814 917 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 STK38Q15208 465 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 SNCBQ16143 134 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 TTLL7Q6ZT98 887 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 SLX1AQ9BQ83 275 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 LLPHQ9BRT6 129 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 GOLPH3LQ9H4A5 285 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 ABCB6Q9NP58 842 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 PAG1Q9NWQ8 432 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 RGL1Q9NZL6 768 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 POLR3DP05423 398 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 SNRPA1P09661 255 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 FAM160A1Q05DH4 1040 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 IQCB1Q15051 598 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 NAA16Q6N069 864 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 RAB11FIP4Q86YS3 637 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 MPHOSPH8Q99549 860 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 EPAS1Q99814 870 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 A0A1B0GVL5 298 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 MYL1P05976 194 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 HAND2P61296 217 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 FKBP4Q02790 459 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 E2F5Q15329 346 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 OTUD7BQ6GQQ9 843 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 SLC30A9Q6PML9 568 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 BICD1Q96G01 975 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 RCOR1Q9UKL0 485 aa13.79□□□□□ -0.2
SMARCA4-217ENST00000591595 ATXN2Q99700 1313 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-217ENST00000591595 NCAPD2Q15021 1401 aa13.78□□□□□ -0.2
SMARCA4-217ENST00000591595 BIN1O00499 593 aa13.78□□□□□ -0.2
SMARCA4-217ENST00000591595 WASHC4Q2M389 1173 aa13.78□□□□□ -0.2
SMARCA4-217ENST00000591595 CCDC40Q4G0X9 1142 aa13.78□□□□□ -0.2
SMARCA4-217ENST00000591595 FAM177A1Q8N128 213 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-217ENST00000591595 ATL2Q8NHH9 583 aa13.78□□□□□ -0.2
SMARCA4-217ENST00000591595 FAM81AQ8TBF8 368 aa13.78□□□□□ -0.2
SMARCA4-217ENST00000591595 RABEP2Q9H5N1 569 aa13.78□□□□□ -0.2
SMARCA4-217ENST00000591595 IMPACTQ9P2X3 320 aa13.78□□□□□ -0.2
SMARCA4-217ENST00000591595 ZNF330Q9Y3S2 320 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-217ENST00000591595 ARHGAP23Q9P227 1491 aa13.78□□□□□ -0.2
SMARCA4-217ENST00000591595 ADGRL3Q9HAR2 1447 aa13.77□□□□□ -0.2
SMARCA4-217ENST00000591595 SPDYE3A6NKU9 549 aa13.77□□□□□ -0.2
SMARCA4-217ENST00000591595 CPLX1O14810 134 aa13.77□□□□□ -0.2
SMARCA4-217ENST00000591595 AHCYL1O43865 530 aa13.77□□□□□ -0.2
SMARCA4-217ENST00000591595 RASSF9O75901 435 aa13.77□□□□□ -0.2
SMARCA4-217ENST00000591595 FESP07332 822 aa13.77□□□□□ -0.2
SMARCA4-217ENST00000591595 IFIT1P09914 478 aaKnown RBP13.77□□□□□ -0.2
SMARCA4-217ENST00000591595 RASA3Q14644 834 aa13.77□□□□□ -0.2
SMARCA4-217ENST00000591595 DBN1Q16643 649 aa13.77□□□□□ -0.2
SMARCA4-217ENST00000591595 SMARCC2Q8TAQ2 1214 aa13.77□□□□□ -0.2
SMARCA4-217ENST00000591595 KAT14Q9H8E8 782 aa13.77□□□□□ -0.2
SMARCA4-217ENST00000591595 SLIT1O75093 1534 aa13.77□□□□□ -0.2
SMARCA4-217ENST00000591595 A0A0G2JLW4 131 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 PDHBP11177 359 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 ALDH1B1P30837 517 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 ARHGAP25P42331 645 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 IRAK1P51617 712 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 ARMCX5Q6P1M9 558 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 MFN1Q8IWA4 741 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 MRPS27Q92552 414 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 YIPF3Q9GZM5 350 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 ZSWIM4Q9H7M6 989 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 SAMM50Q9Y512 469 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 HEG1Q9ULI3 1381 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 E7EWF7 191 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 POTEB2H3BUK9 544 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 RFX5P48382 616 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 ZBED6P86452 979 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 RRP12Q5JTH9 1297 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms