RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 TRIM28Q13263 835 aaKnown RBP16.55■□□□□ 0.24
RETREG3-208ENST00000589797 INF2Q27J81 1249 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 HS1BP3Q53T59 392 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 WDR78Q5VTH9 848 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 SMYD4Q8IYR2 804 aaPredicted RBP16.55■□□□□ 0.24
RETREG3-208ENST00000589797 EXOC1Q9NV70 894 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 BIN2Q9UBW5 565 aaPredicted RBP16.55■□□□□ 0.24
RETREG3-208ENST00000589797 RCOR1Q9UKL0 485 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 ADGRB2O60241 1585 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 FAM193AP78312 1265 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 PPP4R3BQ5MIZ7 849 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 DBNDD1Q9H9R9 158 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 USP40Q9NVE5 1235 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 ITSN1Q15811 1721 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 CUTAO60888 179 aa16.54■□□□□ 0.24
RETREG3-208ENST00000589797 ARID5BQ14865 1188 aa16.54■□□□□ 0.24
RETREG3-208ENST00000589797 PLEKHA8P1O95397 391 aa16.54■□□□□ 0.24
RETREG3-208ENST00000589797 CASP1P29466 404 aa16.54■□□□□ 0.24
RETREG3-208ENST00000589797 DYMQ7RTS9 669 aa16.54■□□□□ 0.24
RETREG3-208ENST00000589797 FANCLQ9NW38 375 aa16.54■□□□□ 0.24
RETREG3-208ENST00000589797 PLCG2P16885 1265 aa16.54■□□□□ 0.24
RETREG3-208ENST00000589797 CASQ1P31415 396 aa16.54■□□□□ 0.24
RETREG3-208ENST00000589797 CACNB3P54284 484 aa16.54■□□□□ 0.24
RETREG3-208ENST00000589797 PTGDRQ13258 359 aa16.54■□□□□ 0.24
RETREG3-208ENST00000589797 POSTNQ15063 836 aa16.54■□□□□ 0.24
RETREG3-208ENST00000589797 CCDC40Q4G0X9 1142 aa16.54■□□□□ 0.24
RETREG3-208ENST00000589797 RBM28Q9NW13 759 aaKnown RBP16.54■□□□□ 0.24
RETREG3-208ENST00000589797 PCDHB6Q9Y5E3 794 aa16.54■□□□□ 0.24
RETREG3-208ENST00000589797 TNNT3P45378 269 aaPredicted RBP16.53■□□□□ 0.24
RETREG3-208ENST00000589797 USH1GQ495M9 461 aa16.53■□□□□ 0.24
RETREG3-208ENST00000589797 CT47A1Q5JQC4 288 aaPredicted RBP16.53■□□□□ 0.24
RETREG3-208ENST00000589797 MED23Q9ULK4 1368 aa16.53■□□□□ 0.24
RETREG3-208ENST00000589797 KIF5CO60282 957 aa16.53■□□□□ 0.24
RETREG3-208ENST00000589797 NEMFO60524 1076 aa16.53■□□□□ 0.24
RETREG3-208ENST00000589797 LONRF3Q496Y0 759 aa16.53■□□□□ 0.24
RETREG3-208ENST00000589797 MAP7D2Q96T17 732 aa16.53■□□□□ 0.24
RETREG3-208ENST00000589797 CTNND2Q9UQB3 1225 aa16.53■□□□□ 0.24
RETREG3-208ENST00000589797 GSG1L2A8MUP6 293 aa16.53■□□□□ 0.24
RETREG3-208ENST00000589797 KLRF2D3W0D1 207 aa16.53■□□□□ 0.24
RETREG3-208ENST00000589797 FKBP15Q5T1M5 1219 aa16.53■□□□□ 0.24
RETREG3-208ENST00000589797 MYO1BO43795 1136 aa16.52■□□□□ 0.24
RETREG3-208ENST00000589797 ADKP55263 362 aaKnown RBP16.52■□□□□ 0.24
RETREG3-208ENST00000589797 FNBP4Q8N3X1 1017 aaPredicted RBP16.52■□□□□ 0.24
RETREG3-208ENST00000589797 UBN2Q6ZU65 1347 aa16.52■□□□□ 0.24
RETREG3-208ENST00000589797 KIF20BQ96Q89 1820 aa16.52■□□□□ 0.24
RETREG3-208ENST00000589797 GUCY1A2P33402 732 aa16.52■□□□□ 0.24
RETREG3-208ENST00000589797 DDIT3P35638 169 aa16.52■□□□□ 0.24
RETREG3-208ENST00000589797 MATR3P43243 847 aaKnown RBP eCLIP16.52■□□□□ 0.24
RETREG3-208ENST00000589797 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.52■□□□□ 0.24
RETREG3-208ENST00000589797 RTEL1Q9NZ71 1219 aa16.52■□□□□ 0.24
RETREG3-208ENST00000589797 TBC1D7Q9P0N9 293 aa16.52■□□□□ 0.24
RETREG3-208ENST00000589797 USP32Q8NFA0 1604 aa16.52■□□□□ 0.24
RETREG3-208ENST00000589797 RRP9O43818 475 aaKnown RBP16.52■□□□□ 0.23
RETREG3-208ENST00000589797 CUL5Q93034 780 aa16.52■□□□□ 0.23
RETREG3-208ENST00000589797 BMP15O95972 392 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 GNA11P29992 359 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 NLRP12P59046 1061 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 UBXN1Q04323 297 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 GPS2Q13227 327 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 SLC39A14Q15043 492 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 TMEM132AQ24JP5 1023 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 USP17L2Q6R6M4 530 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.51■□□□□ 0.23
RETREG3-208ENST00000589797 ZBTB21Q9ULJ3 1066 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 RPAP1Q9BWH6 1393 aaPredicted RBP16.51■□□□□ 0.23
RETREG3-208ENST00000589797 USP42Q9H9J4 1324 aaKnown RBP16.51■□□□□ 0.23
RETREG3-208ENST00000589797 RIOK3O14730 519 aaKnown RBP16.51■□□□□ 0.23
RETREG3-208ENST00000589797 CMA1P23946 247 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 PLS1Q14651 629 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
RETREG3-208ENST00000589797 CCDC150Q8NCX0 1101 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 OXER1Q8TDS5 423 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 BSDC1Q9NW68 430 aaPredicted RBP16.51■□□□□ 0.23
RETREG3-208ENST00000589797 PSMA7O14818 248 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 SP4Q02446 784 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 HSP90B2PQ58FF3 399 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 FAM84BQ96KN1 310 aaPredicted RBP16.51■□□□□ 0.23
RETREG3-208ENST00000589797 CSRNP2Q9H175 543 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 GOLPH3LQ9H4A5 285 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 UTYO14607 1347 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 COL15A1P39059 1388 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 CSF1RP07333 972 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 CCDC181Q5TID7 509 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 EPSTI1Q96J88 318 aa16.51■□□□□ 0.23
RETREG3-208ENST00000589797 CPDO75976 1380 aa16.5■□□□□ 0.23
RETREG3-208ENST00000589797 SMCO2A6NFE2 343 aa16.5■□□□□ 0.23
RETREG3-208ENST00000589797 FAM196BA6NMK8 535 aa16.5■□□□□ 0.23
RETREG3-208ENST00000589797 AMPD3Q01432 767 aa16.5■□□□□ 0.23
RETREG3-208ENST00000589797 POLR3GO15318 223 aaPredicted RBP16.5■□□□□ 0.23
RETREG3-208ENST00000589797 RPS6KA4O75676 772 aa16.5■□□□□ 0.23
RETREG3-208ENST00000589797 KLRK1P26718 216 aa16.5■□□□□ 0.23
RETREG3-208ENST00000589797 SLC16A2P36021 539 aa16.5■□□□□ 0.23
RETREG3-208ENST00000589797 SLC1A4P43007 532 aa16.5■□□□□ 0.23
RETREG3-208ENST00000589797 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.5■□□□□ 0.23
RETREG3-208ENST00000589797 ATP1A3P13637 1013 aa16.5■□□□□ 0.23
RETREG3-208ENST00000589797 SPA17Q15506 151 aa16.5■□□□□ 0.23
RETREG3-208ENST00000589797 KRT79Q5XKE5 535 aa16.5■□□□□ 0.23
RETREG3-208ENST00000589797 MTERF4Q7Z6M4 381 aaKnown RBP16.5■□□□□ 0.23
RETREG3-208ENST00000589797 SMARCC2Q8TAQ2 1214 aa16.5■□□□□ 0.23
RETREG3-208ENST00000589797 TAB2Q9NYJ8 693 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms