RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 APOA5Q6Q788 366 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 SGMS1Q86VZ5 419 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 TRIM22Q8IYM9 498 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 FMR1NBQ8N0W7 255 aaPredicted RBP8.55□□□□□ -1.04
ZNF540-206ENST00000589117 MYRIPQ8NFW9 859 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 LRP2BPQ9P2M1 347 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 HOOK1Q9UJC3 728 aaKnown RBP8.55□□□□□ -1.04
ZNF540-206ENST00000589117 SMTNL1A8MU46 457 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 SH2B2O14492 632 aaPredicted RBP8.55□□□□□ -1.04
ZNF540-206ENST00000589117 IFIT3O14879 490 aaKnown RBP8.55□□□□□ -1.04
ZNF540-206ENST00000589117 AP5Z1O43299 807 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 SLC3A2P08195 630 aaKnown RBP8.55□□□□□ -1.04
ZNF540-206ENST00000589117 CMA1P23946 247 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 CRKLP46109 303 aaKnown RBP8.55□□□□□ -1.04
ZNF540-206ENST00000589117 TDO2P48775 406 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 SSRP1Q08945 709 aaKnown RBP8.55□□□□□ -1.04
ZNF540-206ENST00000589117 PPP2R5BQ15173 497 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 SUSD4Q5VX71 490 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 CCDC186Q7Z3E2 898 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 IFNL3Q8IZI9 196 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 MAGEB6Q8N7X4 407 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 KIAA1468Q9P260 1216 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 RTL9Q8NET4 1388 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 LOC102724428A0A0B4J2F2 783 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 TCRBV5S4A2TA0A5A2 114 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 GOLGA8AA7E2F4 631 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 B4E1Z4 1266 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 PPP6R2O75170 966 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 SIK1P57059 783 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 KIF23Q02241 960 aaPredicted RBP8.54□□□□□ -1.04
ZNF540-206ENST00000589117 SLC39A14Q15043 492 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 IQCB1Q15051 598 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 AKNAD1Q5T1N1 836 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 CLEC4GQ6UXB4 293 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 HELBQ8NG08 1087 aaPredicted RBP8.54□□□□□ -1.04
ZNF540-206ENST00000589117 TIGD1Q96MW7 591 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 FTOQ9C0B1 505 aaKnown RBP eCLIP8.54□□□□□ -1.04
ZNF540-206ENST00000589117 GOLPH3LQ9H4A5 285 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 NIP7Q9Y221 180 aaKnown RBP eCLIP8.54□□□□□ -1.04
ZNF540-206ENST00000589117 UBN2Q6ZU65 1347 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 ITGB4P16144 1822 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 A0A1B0GVL5 298 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 PPFIA3O75145 1194 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 MBD4O95243 580 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 PTGS1P23219 599 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 RCAN1P53805 252 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 GSDMDP57764 484 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 PDE4CQ08493 712 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 NR6A1Q15406 480 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 CAVIN4Q5BKX8 364 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 INTS5Q6P9B9 1019 aaKnown RBP8.54□□□□□ -1.04
ZNF540-206ENST00000589117 MICU3Q86XE3 530 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 IGDCC4Q8TDY8 1250 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 SLC39A7Q92504 469 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 CCDC34Q96HJ3 373 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 BPIFA3Q9BQP9 254 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 NOL10Q9BSC4 688 aaKnown RBP8.54□□□□□ -1.04
ZNF540-206ENST00000589117 TOMM22Q9NS69 142 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 FAM13BQ9NYF5 915 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 WWC3Q9ULE0 1092 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 LHX6Q9UPM6 363 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 CLIC4Q9Y696 253 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 PNPLA7Q6ZV29 1317 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 MYH3P11055 1940 aa8.54□□□□□ -1.04
ZNF540-206ENST00000589117 ZNF202O95125 648 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 XBP1P17861 261 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 GCGRP47871 477 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 CLCN6P51797 869 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 NDUFA8P51970 172 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 RASGRF1Q13972 1273 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 VPS37DQ86XT2 251 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 TBC1D10CQ8IV04 446 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 DCBLD2Q96PD2 775 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 ZSWIM5Q9P217 1185 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 SLC4A4Q9Y6R1 1079 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 STK36Q9NRP7 1315 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 ANKRD36CQ5JPF3 1778 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 KAT6BQ8WYB5 2073 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 SPATA31A1Q5TZJ5 1347 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 FAM177BA6PVY3 158 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 PIK3CDO00329 1044 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 HOXB3P14651 431 aaPredicted RBP8.53□□□□□ -1.04
ZNF540-206ENST00000589117 SYKP43405 635 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 WTAPQ15007 396 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 KRT40Q6A162 431 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 OTUD7BQ6GQQ9 843 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 CYB5R4Q7L1T6 521 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 STK32AQ8WU08 396 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 STAG1Q8WVM7 1258 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 UBAC1Q9BSL1 405 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 LY9Q9HBG7 655 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.53□□□□□ -1.04
ZNF540-206ENST00000589117 IMPACTQ9P2X3 320 aa8.53□□□□□ -1.04
ZNF540-206ENST00000589117 MYH7P12883 1935 aa8.52□□□□□ -1.04
ZNF540-206ENST00000589117 CAMTA2O94983 1202 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 PCP11498 1178 aaKnown RBP8.52□□□□□ -1.05
ZNF540-206ENST00000589117 IFNAR1P17181 557 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 U2AF2P26368 475 aaKnown RBP eCLIP8.52□□□□□ -1.05
ZNF540-206ENST00000589117 GTF2E1P29083 439 aaPredicted RBP8.52□□□□□ -1.05
ZNF540-206ENST00000589117 GTF2F1P35269 517 aaKnown RBP eCLIP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms