RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 PARP3Q9Y6F1 533 aa21.22■□□□□ 0.99
DDX39A-206ENST00000587730 DOCK2Q92608 1830 aa21.22■□□□□ 0.99
DDX39A-206ENST00000587730 POLR2DO15514 142 aaKnown RBP21.22■□□□□ 0.99
DDX39A-206ENST00000587730 PCP11498 1178 aaKnown RBP21.22■□□□□ 0.99
DDX39A-206ENST00000587730 AKAP17AQ02040 695 aaKnown RBP21.22■□□□□ 0.99
DDX39A-206ENST00000587730 GPR161Q8N6U8 529 aaKnown RBP21.22■□□□□ 0.99
DDX39A-206ENST00000587730 ZNF446Q9NWS9 450 aa21.22■□□□□ 0.99
DDX39A-206ENST00000587730 AATFQ9NY61 560 aaKnown RBP eCLIP21.22■□□□□ 0.99
DDX39A-206ENST00000587730 RAI14Q9P0K7 980 aa21.22■□□□□ 0.99
DDX39A-206ENST00000587730 VWA3AA6NCI4 1184 aa21.21■□□□□ 0.99
DDX39A-206ENST00000587730 ADAMTS2O95450 1211 aa21.21■□□□□ 0.99
DDX39A-206ENST00000587730 TMED8Q6PL24 325 aaPredicted RBP21.21■□□□□ 0.99
DDX39A-206ENST00000587730 ZNF34Q8IZ26 560 aa21.21■□□□□ 0.99
DDX39A-206ENST00000587730 FANCBQ8NB91 859 aa21.21■□□□□ 0.99
DDX39A-206ENST00000587730 FERMT2Q96AC1 680 aa21.21■□□□□ 0.99
DDX39A-206ENST00000587730 UBAC1Q9BSL1 405 aa21.21■□□□□ 0.99
DDX39A-206ENST00000587730 INTS13Q9NVM9 706 aa21.21■□□□□ 0.99
DDX39A-206ENST00000587730 BMP6P22004 513 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 ANAPC4Q9UJX5 808 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 BCL9O00512 1426 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 A0A1B0GTH6 734 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 TRIM75PA6NK02 468 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 TMEM232C9JQI7 657 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 ACTN4O43707 911 aaKnown RBP21.2■□□□□ 0.98
DDX39A-206ENST00000587730 ZRANB2O95218 330 aaKnown RBP eCLIP21.2■□□□□ 0.98
DDX39A-206ENST00000587730 MAP3K9P80192 1104 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 CTDSPL2Q05D32 466 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 PDE4BQ07343 736 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 RASGRF1Q13972 1273 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 POTEAQ6S8J7 498 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 TC2NQ8N9U0 490 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 MYL10Q9BUA6 226 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 BRMS1Q9HCU9 246 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 SERTAD1Q9UHV2 236 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 FHOD1Q9Y613 1164 aa21.2■□□□□ 0.98
DDX39A-206ENST00000587730 PNMA6AP0CW24 399 aaPredicted RBP21.19■□□□□ 0.98
DDX39A-206ENST00000587730 NR1I3Q14994 352 aa21.19■□□□□ 0.98
DDX39A-206ENST00000587730 TEX35Q5T0J7 233 aa21.19■□□□□ 0.98
DDX39A-206ENST00000587730 SPATA1Q5VX52 437 aa21.19■□□□□ 0.98
DDX39A-206ENST00000587730 ZNF654Q8IZM8 581 aa21.19■□□□□ 0.98
DDX39A-206ENST00000587730 PDILTQ8N807 584 aa21.19■□□□□ 0.98
DDX39A-206ENST00000587730 ESR2Q92731 530 aa21.19■□□□□ 0.98
DDX39A-206ENST00000587730 CCDC51Q96ER9 411 aa21.19■□□□□ 0.98
DDX39A-206ENST00000587730 ARMT1Q9H993 441 aa21.19■□□□□ 0.98
DDX39A-206ENST00000587730 STRN4Q9NRL3 753 aa21.19■□□□□ 0.98
DDX39A-206ENST00000587730 SLC4A4Q9Y6R1 1079 aa21.19■□□□□ 0.98
DDX39A-206ENST00000587730 AKR1B15C9JRZ8 316 aaPredicted RBP21.18■□□□□ 0.98
DDX39A-206ENST00000587730 CCDC175P0C221 793 aa21.18■□□□□ 0.98
DDX39A-206ENST00000587730 CALM1P0DP23 149 aa21.18■□□□□ 0.98
DDX39A-206ENST00000587730 CALM2P0DP24 149 aa21.18■□□□□ 0.98
DDX39A-206ENST00000587730 CALM3P0DP25 149 aa21.18■□□□□ 0.98
DDX39A-206ENST00000587730 GNG11P61952 73 aa21.18■□□□□ 0.98
DDX39A-206ENST00000587730 FILIP1LQ4L180 1135 aa21.18■□□□□ 0.98
DDX39A-206ENST00000587730 SYNE4Q8N205 404 aa21.18■□□□□ 0.98
DDX39A-206ENST00000587730 RABGGTAQ92696 567 aa21.18■□□□□ 0.98
DDX39A-206ENST00000587730 GSDMAQ96QA5 445 aa21.18■□□□□ 0.98
DDX39A-206ENST00000587730 RBM28Q9NW13 759 aaKnown RBP21.18■□□□□ 0.98
DDX39A-206ENST00000587730 DZIP3Q86Y13 1208 aaKnown RBP21.18■□□□□ 0.98
DDX39A-206ENST00000587730 MRFAP1Q9Y605 127 aa21.18■□□□□ 0.98
DDX39A-206ENST00000587730 PARP10Q53GL7 1025 aa21.17■□□□□ 0.98
DDX39A-206ENST00000587730 PPFIBP1Q86W92 1011 aa21.17■□□□□ 0.98
DDX39A-206ENST00000587730 NKX2-3Q8TAU0 364 aa21.17■□□□□ 0.98
DDX39A-206ENST00000587730 CARD6Q9BX69 1037 aa21.17■□□□□ 0.98
DDX39A-206ENST00000587730 TOMM22Q9NS69 142 aa21.17■□□□□ 0.98
DDX39A-206ENST00000587730 CHD4Q14839 1912 aa21.17■□□□□ 0.98
DDX39A-206ENST00000587730 POTEB2H3BUK9 544 aa21.16■□□□□ 0.98
DDX39A-206ENST00000587730 FMR1Q06787 632 aaKnown RBP eCLIP21.16■□□□□ 0.98
DDX39A-206ENST00000587730 KCNJ14Q9UNX9 436 aa21.16■□□□□ 0.98
DDX39A-206ENST00000587730 SPATA31A6Q5VVP1 1343 aa21.16■□□□□ 0.98
DDX39A-206ENST00000587730 NPHP1O15259 732 aa21.15■□□□□ 0.98
DDX39A-206ENST00000587730 GUCY1A2P33402 732 aa21.15■□□□□ 0.98
DDX39A-206ENST00000587730 KRT2P35908 639 aa21.15■□□□□ 0.98
DDX39A-206ENST00000587730 PPP2R3AQ06190 1150 aa21.15■□□□□ 0.98
DDX39A-206ENST00000587730 PPARAQ07869 468 aa21.15■□□□□ 0.98
DDX39A-206ENST00000587730 CCDC152Q4G0S7 254 aa21.15■□□□□ 0.98
DDX39A-206ENST00000587730 RRP12Q5JTH9 1297 aaKnown RBP21.15■□□□□ 0.98
DDX39A-206ENST00000587730 GOLGA1Q92805 767 aa21.15■□□□□ 0.98
DDX39A-206ENST00000587730 IQSEC3Q9UPP2 1182 aaPredicted RBP21.15■□□□□ 0.98
DDX39A-206ENST00000587730 PCDHB6Q9Y5E3 794 aa21.15■□□□□ 0.98
DDX39A-206ENST00000587730 ITIH6Q6UXX5 1313 aa21.15■□□□□ 0.98
DDX39A-206ENST00000587730 FOXN1O15353 648 aa21.15■□□□□ 0.98
DDX39A-206ENST00000587730 PRPF3O43395 683 aaKnown RBP21.15■□□□□ 0.98
DDX39A-206ENST00000587730 IGHMBP2P38935 993 aaKnown RBP21.15■□□□□ 0.98
DDX39A-206ENST00000587730 CDC5LQ99459 802 aaKnown RBP21.15■□□□□ 0.98
DDX39A-206ENST00000587730 CSRNP2Q9H175 543 aa21.15■□□□□ 0.98
DDX39A-206ENST00000587730 COL14A1Q05707 1796 aaKnown RBP21.15■□□□□ 0.98
DDX39A-206ENST00000587730 SH3RF1Q7Z6J0 888 aa21.14■□□□□ 0.97
DDX39A-206ENST00000587730 CNGA4Q8IV77 575 aa21.14■□□□□ 0.97
DDX39A-206ENST00000587730 LCORLQ8N3X6 602 aa21.14■□□□□ 0.97
DDX39A-206ENST00000587730 GNL3LQ9NVN8 582 aaKnown RBP21.14■□□□□ 0.97
DDX39A-206ENST00000587730 LRP2BPQ9P2M1 347 aa21.14■□□□□ 0.97
DDX39A-206ENST00000587730 ZBTB1Q9Y2K1 713 aa21.14■□□□□ 0.97
DDX39A-206ENST00000587730 SYNRGQ9UMZ2 1314 aa21.14■□□□□ 0.97
DDX39A-206ENST00000587730 PRR29P0C7W0 189 aa21.13■□□□□ 0.97
DDX39A-206ENST00000587730 NT5C2P49902 561 aa21.13■□□□□ 0.97
DDX39A-206ENST00000587730 SPAG1Q07617 926 aa21.13■□□□□ 0.97
DDX39A-206ENST00000587730 RSRC2Q7L4I2 434 aaKnown RBP21.13■□□□□ 0.97
DDX39A-206ENST00000587730 CATIPQ7Z7H3 387 aa21.13■□□□□ 0.97
DDX39A-206ENST00000587730 LRRN4CLQ8ND94 238 aa21.13■□□□□ 0.97
DDX39A-206ENST00000587730 CABP5Q9NP86 173 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms