RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 ELNP15502 786 aa22.04■■□□□ 1.12
CHD3-214ENST00000572579 FAM110CQ1W6H9 321 aa22.04■■□□□ 1.12
CHD3-214ENST00000572579 CRACR2BQ8N4Y2 399 aaPredicted RBP22.04■■□□□ 1.12
CHD3-214ENST00000572579 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.04■■□□□ 1.12
CHD3-214ENST00000572579 P2RX7Q99572 595 aaKnown RBP22.04■■□□□ 1.12
CHD3-214ENST00000572579 BCL11AQ9H165 835 aa22.04■■□□□ 1.12
CHD3-214ENST00000572579 TXNRD2Q9NNW7 524 aa22.04■■□□□ 1.12
CHD3-214ENST00000572579 GJD2Q9UKL4 321 aa22.04■■□□□ 1.12
CHD3-214ENST00000572579 TNPO2O14787 897 aaKnown RBP22.03■■□□□ 1.12
CHD3-214ENST00000572579 ADCY3O60266 1144 aa22.03■■□□□ 1.12
CHD3-214ENST00000572579 RAB11FIP3O75154 756 aa22.03■■□□□ 1.12
CHD3-214ENST00000572579 GH2P01242 217 aa22.03■■□□□ 1.12
CHD3-214ENST00000572579 HOXA7P31268 230 aaPredicted RBP22.03■■□□□ 1.12
CHD3-214ENST00000572579 USP5P45974 858 aa22.03■■□□□ 1.12
CHD3-214ENST00000572579 SLC9C2Q5TAH2 1124 aa22.03■■□□□ 1.12
CHD3-214ENST00000572579 UBE2Q1Q7Z7E8 422 aa22.03■■□□□ 1.12
CHD3-214ENST00000572579 UNC93B1Q9H1C4 597 aa22.03■■□□□ 1.12
CHD3-214ENST00000572579 AS3MTQ9HBK9 375 aa22.03■■□□□ 1.12
CHD3-214ENST00000572579 HMMRO75330 724 aa22.02■■□□□ 1.12
CHD3-214ENST00000572579 HLA-DOAP06340 250 aa22.02■■□□□ 1.12
CHD3-214ENST00000572579 IFIT2P09913 472 aaKnown RBP22.02■■□□□ 1.12
CHD3-214ENST00000572579 IRF5Q13568 498 aa22.02■■□□□ 1.12
CHD3-214ENST00000572579 DNAJC2Q99543 621 aaKnown RBP22.02■■□□□ 1.12
CHD3-214ENST00000572579 PNMA3Q9UL41 463 aa22.02■■□□□ 1.12
CHD3-214ENST00000572579 ZNF532Q9HCE3 1301 aa22.02■■□□□ 1.12
CHD3-214ENST00000572579 CDK5RAP2Q96SN8 1893 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 MAGEB6P1A0A0J9YX57 407 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 USP17L10C9JJH3 530 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 GJB1P08034 283 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 GUCY1A2P33402 732 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 SHMT1P34896 483 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 GJA8P48165 433 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 GABPAQ06546 454 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 PDE3AQ14432 1141 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 SLAIN1Q8ND83 568 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 RNF208Q9H0X6 261 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 EHD4Q9H223 541 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 BOLA2Q9H3K6 86 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 GINM1Q9NU53 330 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 SERPINB13Q9UIV8 391 aa22.01■■□□□ 1.11
CHD3-214ENST00000572579 C19orf81C9J6K1 198 aa22■■□□□ 1.11
CHD3-214ENST00000572579 SMIM22K7EJ46 135 aa22■■□□□ 1.11
CHD3-214ENST00000572579 SMARCA5O60264 1052 aaPredicted RBP22■■□□□ 1.11
CHD3-214ENST00000572579 GCLCP48506 637 aaPredicted RBP22■■□□□ 1.11
CHD3-214ENST00000572579 TTF1Q15361 905 aaPredicted RBP22■■□□□ 1.11
CHD3-214ENST00000572579 Q3C1V9 767 aa22■■□□□ 1.11
CHD3-214ENST00000572579 TMED8Q6PL24 325 aaPredicted RBP22■■□□□ 1.11
CHD3-214ENST00000572579 LCORLQ8N3X6 602 aa22■■□□□ 1.11
CHD3-214ENST00000572579 ACER1Q8TDN7 264 aa22■■□□□ 1.11
CHD3-214ENST00000572579 PXYLP1Q8TE99 480 aa22■■□□□ 1.11
CHD3-214ENST00000572579 TRIM34Q9BYJ4 488 aa22■■□□□ 1.11
CHD3-214ENST00000572579 RBPJLQ9UBG7 517 aa22■■□□□ 1.11
CHD3-214ENST00000572579 MORF4L1Q9UBU8 362 aa22■■□□□ 1.11
CHD3-214ENST00000572579 BIN2Q9UBW5 565 aaPredicted RBP22■■□□□ 1.11
CHD3-214ENST00000572579 INHAP05111 366 aa21.99■■□□□ 1.11
CHD3-214ENST00000572579 CYP2D6P10635 497 aa21.99■■□□□ 1.11
CHD3-214ENST00000572579 ATP5JP18859 108 aa21.99■■□□□ 1.11
CHD3-214ENST00000572579 CERS3Q8IU89 383 aa21.99■■□□□ 1.11
CHD3-214ENST00000572579 SDR42E1Q8WUS8 393 aa21.99■■□□□ 1.11
CHD3-214ENST00000572579 LOC285556D6RIA3 1793 aa21.99■■□□□ 1.11
CHD3-214ENST00000572579 FOCADQ5VW36 1801 aa21.99■■□□□ 1.11
CHD3-214ENST00000572579 PRKAB2O43741 272 aa21.98■■□□□ 1.11
CHD3-214ENST00000572579 HERVK_113P62684 666 aa21.98■■□□□ 1.11
CHD3-214ENST00000572579 PABPC4Q13310 644 aaKnown RBP eCLIP21.98■■□□□ 1.11
CHD3-214ENST00000572579 HAUS7Q99871 368 aa21.98■■□□□ 1.11
CHD3-214ENST00000572579 TMOD4Q9NZQ9 345 aa21.98■■□□□ 1.11
CHD3-214ENST00000572579 TRIM32Q13049 653 aa21.97■■□□□ 1.11
CHD3-214ENST00000572579 CERKLQ49MI3 558 aaPredicted RBP21.97■■□□□ 1.11
CHD3-214ENST00000572579 TTC6Q86TZ1 520 aa21.97■■□□□ 1.11
CHD3-214ENST00000572579 U2AF1L4Q8WU68 220 aaKnown RBP21.97■■□□□ 1.11
CHD3-214ENST00000572579 COA7Q96BR5 231 aa21.97■■□□□ 1.11
CHD3-214ENST00000572579 ARMT1Q9H993 441 aa21.97■■□□□ 1.11
CHD3-214ENST00000572579 DCP1AQ9NPI6 582 aaPredicted RBP21.97■■□□□ 1.11
CHD3-214ENST00000572579 PAG1Q9NWQ8 432 aa21.97■■□□□ 1.11
CHD3-214ENST00000572579 DOCK3Q8IZD9 2030 aa21.97■■□□□ 1.11
CHD3-214ENST00000572579 ADD2P35612 726 aa21.96■■□□□ 1.11
CHD3-214ENST00000572579 UBXN2AP68543 259 aa21.96■■□□□ 1.11
CHD3-214ENST00000572579 IRX3P78415 501 aaPredicted RBP21.96■■□□□ 1.11
CHD3-214ENST00000572579 USP17L2Q6R6M4 530 aa21.96■■□□□ 1.11
CHD3-214ENST00000572579 SLC44A5Q8NCS7 719 aa21.96■■□□□ 1.11
CHD3-214ENST00000572579 C12orf42Q96LP6 360 aa21.96■■□□□ 1.11
CHD3-214ENST00000572579 ATAD5Q96QE3 1844 aa21.96■■□□□ 1.11
CHD3-214ENST00000572579 MGAMO43451 1857 aa21.95■■□□□ 1.1
CHD3-214ENST00000572579 CNMDO75829 334 aa21.95■■□□□ 1.1
CHD3-214ENST00000572579 RAB3GAP1Q15042 981 aa21.95■■□□□ 1.1
CHD3-214ENST00000572579 ZYXQ15942 572 aaKnown RBP21.95■■□□□ 1.1
CHD3-214ENST00000572579 ABCB5Q2M3G0 1257 aa21.95■■□□□ 1.1
CHD3-214ENST00000572579 PAK6Q9NQU5 681 aaPredicted RBP21.95■■□□□ 1.1
CHD3-214ENST00000572579 MCM9Q9NXL9 1143 aa21.95■■□□□ 1.1
CHD3-214ENST00000572579 TAOK2Q9UL54 1235 aa21.95■■□□□ 1.1
CHD3-214ENST00000572579 A0A1W2PRG0 241 aa21.94■■□□□ 1.1
CHD3-214ENST00000572579 SGPL1O95470 568 aa21.94■■□□□ 1.1
CHD3-214ENST00000572579 POLR3DP05423 398 aaPredicted RBP21.94■■□□□ 1.1
CHD3-214ENST00000572579 SEPT2Q15019 361 aa21.94■■□□□ 1.1
CHD3-214ENST00000572579 GPRC5AQ8NFJ5 357 aa21.94■■□□□ 1.1
CHD3-214ENST00000572579 NKX2-3Q8TAU0 364 aa21.94■■□□□ 1.1
CHD3-214ENST00000572579 DYNLL2Q96FJ2 89 aa21.94■■□□□ 1.1
CHD3-214ENST00000572579 CRNKL1Q9BZJ0 848 aaKnown RBP21.94■■□□□ 1.1
CHD3-214ENST00000572579 PORCNQ9H237 461 aa21.94■■□□□ 1.1
CHD3-214ENST00000572579 H0YGN5 161 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms