RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 PCDHB6Q9Y5E3 794 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 SLC4A4Q9Y6R1 1079 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 ZPR1O75312 459 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 NLRP5P59047 1200 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 MAP9Q49MG5 647 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 APOA5Q6Q788 366 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 RIN2Q8WYP3 895 aaPredicted RBP11.26□□□□□ -0.61
USP43-203ENST00000570827 EPSTI1Q96J88 318 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 TRIM47Q96LD4 638 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 GNL3LQ9NVN8 582 aaKnown RBP11.26□□□□□ -0.61
USP43-203ENST00000570827 ZNF532Q9HCE3 1301 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 NPHP4O75161 1426 aaPredicted RBP11.26□□□□□ -0.61
USP43-203ENST00000570827 H3BQF6 201 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 BRD3Q15059 726 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 CCDC96Q2M329 555 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 NOSTRINQ8IVI9 506 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 AFAP1L1Q8TED9 768 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 TFR2Q9UP52 801 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 ERBB3P21860 1342 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 MON2Q7Z3U7 1717 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 NRKQ7Z2Y5 1582 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 COL15A1P39059 1388 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 SHTN1A0MZ66 631 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 CCDC151A5D8V7 595 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 CASP8Q14790 479 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 PLBD2Q8NHP8 589 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 CSRNP2Q9H175 543 aa11.26□□□□□ -0.61
USP43-203ENST00000570827 C3P01024 1663 aa11.25□□□□□ -0.61
USP43-203ENST00000570827 DIP2AQ14689 1571 aa11.25□□□□□ -0.61
USP43-203ENST00000570827 MTIF2P46199 727 aaKnown RBP11.25□□□□□ -0.61
USP43-203ENST00000570827 MAP3K12Q12852 859 aa11.25□□□□□ -0.61
USP43-203ENST00000570827 TRIM65Q6PJ69 517 aa11.25□□□□□ -0.61
USP43-203ENST00000570827 BCCIPQ9P287 314 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP43-203ENST00000570827 MRFAP1Q9Y605 127 aa11.25□□□□□ -0.61
USP43-203ENST00000570827 V9GY48 417 aaPredicted RBP11.25□□□□□ -0.61
USP43-203ENST00000570827 PEAK1Q9H792 1746 aa11.25□□□□□ -0.61
USP43-203ENST00000570827 VSNL1P62760 191 aa11.25□□□□□ -0.61
USP43-203ENST00000570827 CYB5R4Q7L1T6 521 aa11.25□□□□□ -0.61
USP43-203ENST00000570827 CNGA4Q8IV77 575 aa11.25□□□□□ -0.61
USP43-203ENST00000570827 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP43-203ENST00000570827 HDAC6Q9UBN7 1215 aa11.25□□□□□ -0.61
USP43-203ENST00000570827 CCT5P48643 541 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 SPA17Q15506 151 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 KANK3Q6NY19 840 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 FOXR1Q6PIV2 292 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 DCAF5Q96JK2 942 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 GUCY1A2P33402 732 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 EXOC4Q96A65 974 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 IL17RAQ96F46 866 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 SH3TC1Q8TE82 1336 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 CCDC196A0A1B0GTZ2 297 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 ANKRD18BA2A2Z9 1011 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 RNF40O75150 1001 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 IDEP14735 1019 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 ODF2Q5BJF6 829 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 NBPF14Q5TI25 921 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 NBPF10Q6P3W6 841 aaKnown RBP11.24□□□□□ -0.61
USP43-203ENST00000570827 SND1Q7KZF4 910 aaKnown RBP eCLIP11.24□□□□□ -0.61
USP43-203ENST00000570827 NBPF15Q8N660 670 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 TC2NQ8N9U0 490 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 IFT81Q8WYA0 676 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 ALDH8A1Q9H2A2 487 aaPredicted RBP11.24□□□□□ -0.61
USP43-203ENST00000570827 TRIM10Q9UDY6 481 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 MYO6Q9UM54 1294 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 LUC7L2Q9Y383 392 aaKnown RBP11.24□□□□□ -0.61
USP43-203ENST00000570827 SAMM50Q9Y512 469 aa11.24□□□□□ -0.61
USP43-203ENST00000570827 EBAG9O00559 213 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 MYO1BO43795 1136 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 SSBP05455 408 aaKnown RBP eCLIP11.23□□□□□ -0.61
USP43-203ENST00000570827 ITGA6P23229 1130 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 RDXP35241 583 aaKnown RBP11.23□□□□□ -0.61
USP43-203ENST00000570827 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 STIM1Q13586 685 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 RAD9BQ6WBX8 426 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 TBC1D10CQ8IV04 446 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 FOXP4Q8IVH2 680 aaPredicted RBP11.23□□□□□ -0.61
USP43-203ENST00000570827 CCDC47Q96A33 483 aaKnown RBP11.23□□□□□ -0.61
USP43-203ENST00000570827 CTAGE1Q96RT6 745 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 FUT8Q9BYC5 575 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 UTRNP46939 3433 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 ATP1A2P50993 1020 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 HLFQ16534 295 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 TDRD12Q587J7 1177 aaKnown RBP11.23□□□□□ -0.61
USP43-203ENST00000570827 RILPL1Q5EBL4 403 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 ANKRD13CQ8N6S4 541 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 PNKPQ96T60 521 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 GREM2Q9H772 168 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 ZMYM6O95789 1325 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 PRKAB2O43741 272 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 ARID5AQ03989 594 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 CCDC178Q5BJE1 867 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 FAM76AQ8TAV0 307 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 OXER1Q8TDS5 423 aa11.23□□□□□ -0.61
USP43-203ENST00000570827 BAZ2BQ9UIF8 2168 aaKnown RBP11.22□□□□□ -0.61
USP43-203ENST00000570827 GOLGA6CA6NDK9 693 aa11.22□□□□□ -0.61
USP43-203ENST00000570827 AKR1B10O60218 316 aa11.22□□□□□ -0.61
USP43-203ENST00000570827 GOLGA6DP0CG33 693 aa11.22□□□□□ -0.61
USP43-203ENST00000570827 PTPROQ16827 1216 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms