RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 PHF24Q9UPV7 400 aa8.21□□□□□ -1.1
UBFD1-209ENST00000569919 MAP2P11137 1827 aaKnown RBP8.21□□□□□ -1.1
UBFD1-209ENST00000569919 ARFGEF1Q9Y6D6 1849 aa8.21□□□□□ -1.1
UBFD1-209ENST00000569919 CNTNAP4Q9C0A0 1308 aa8.21□□□□□ -1.1
UBFD1-209ENST00000569919 FLT4P35916 1363 aa8.21□□□□□ -1.1
UBFD1-209ENST00000569919 KIAA1551Q9HCM1 1747 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 GPR25O00155 361 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 SORBS3O60504 671 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 RECKO95980 971 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 CYP2E1P05181 493 aaPredicted RBP8.2□□□□□ -1.1
UBFD1-209ENST00000569919 RARAP10276 462 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 PHKG2P15735 406 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 FGFR3P22607 806 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 CES1P23141 567 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 CHRNA5P30532 468 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 IRS1P35568 1242 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 CTCFP49711 727 aaPredicted RBP8.2□□□□□ -1.1
UBFD1-209ENST00000569919 TSNAXIP1Q2TAA8 658 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.2□□□□□ -1.1
UBFD1-209ENST00000569919 FOXR1Q6PIV2 292 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 PI16Q6UXB8 463 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 EPS8L3Q8TE67 593 aaKnown RBP8.2□□□□□ -1.1
UBFD1-209ENST00000569919 PMEPA1Q969W9 287 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 TRERF1Q96PN7 1200 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 BACH2Q9BYV9 841 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 IGSF5Q9NSI5 407 aa8.2□□□□□ -1.1
UBFD1-209ENST00000569919 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.2□□□□□ -1.1
UBFD1-209ENST00000569919 TNRC6CQ9HCJ0 1690 aaKnown RBP8.2□□□□□ -1.1
UBFD1-209ENST00000569919 FOXN1O15353 648 aa8.19□□□□□ -1.1
UBFD1-209ENST00000569919 NFKB1P19838 968 aa8.19□□□□□ -1.1
UBFD1-209ENST00000569919 TM4SF1P30408 202 aa8.19□□□□□ -1.1
UBFD1-209ENST00000569919 RAB44Q7Z6P3 723 aaPredicted RBP8.19□□□□□ -1.1
UBFD1-209ENST00000569919 OR13H1Q8NG92 308 aa8.19□□□□□ -1.1
UBFD1-209ENST00000569919 BHMTQ93088 406 aa8.19□□□□□ -1.1
UBFD1-209ENST00000569919 FRMD6Q96NE9 622 aa8.19□□□□□ -1.1
UBFD1-209ENST00000569919 NPHS2Q9NP85 383 aa8.19□□□□□ -1.1
UBFD1-209ENST00000569919 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.19□□□□□ -1.1
UBFD1-209ENST00000569919 C4AP0C0L4 1744 aa8.19□□□□□ -1.1
UBFD1-209ENST00000569919 TONSLQ96HA7 1378 aa8.19□□□□□ -1.1
UBFD1-209ENST00000569919 SBF1O95248 1867 aa8.19□□□□□ -1.1
UBFD1-209ENST00000569919 BRCA1P38398 1863 aaKnown RBP8.18□□□□□ -1.1
UBFD1-209ENST00000569919 HSP90AB1P08238 724 aaKnown RBP8.18□□□□□ -1.1
UBFD1-209ENST00000569919 CTBSQ01459 385 aa8.18□□□□□ -1.1
UBFD1-209ENST00000569919 SV2AQ7L0J3 742 aa8.18□□□□□ -1.1
UBFD1-209ENST00000569919 GALNT12Q8IXK2 581 aa8.18□□□□□ -1.1
UBFD1-209ENST00000569919 TTLL6Q8N841 843 aa8.18□□□□□ -1.1
UBFD1-209ENST00000569919 EFCC1Q9HA90 598 aa8.18□□□□□ -1.1
UBFD1-209ENST00000569919 KANSL3Q9P2N6 904 aa8.18□□□□□ -1.1
UBFD1-209ENST00000569919 VTI1BQ9UEU0 232 aa8.18□□□□□ -1.1
UBFD1-209ENST00000569919 PKD1L3Q7Z443 1732 aa8.17□□□□□ -1.1
UBFD1-209ENST00000569919 ST20-MTHFSA0A0A6YYL1 179 aa8.17□□□□□ -1.1
UBFD1-209ENST00000569919 POLRMTO00411 1230 aaKnown RBP8.17□□□□□ -1.1
UBFD1-209ENST00000569919 PPM1GO15355 546 aaPredicted RBP8.17□□□□□ -1.1
UBFD1-209ENST00000569919 RASSF7Q02833 373 aa8.17□□□□□ -1.1
UBFD1-209ENST00000569919 DDR1Q08345 913 aa8.17□□□□□ -1.1
UBFD1-209ENST00000569919 NANOS1Q8WY41 292 aaKnown RBP8.17□□□□□ -1.1
UBFD1-209ENST00000569919 TESK2Q96S53 571 aa8.17□□□□□ -1.1
UBFD1-209ENST00000569919 TLR7Q9NYK1 1049 aaKnown RBP8.17□□□□□ -1.1
UBFD1-209ENST00000569919 AK5Q9Y6K8 562 aa8.17□□□□□ -1.1
UBFD1-209ENST00000569919 WASHC2AQ641Q2 1341 aa8.17□□□□□ -1.1
UBFD1-209ENST00000569919 USP42Q9H9J4 1324 aaKnown RBP8.17□□□□□ -1.1
UBFD1-209ENST00000569919 KDM6AO15550 1401 aaPredicted RBP8.17□□□□□ -1.1
UBFD1-209ENST00000569919 PHF20L1A8MW92 1017 aa8.16□□□□□ -1.1
UBFD1-209ENST00000569919 H0YIN7 160 aa8.16□□□□□ -1.1
UBFD1-209ENST00000569919 MAP3K6O95382 1288 aa8.16□□□□□ -1.1
UBFD1-209ENST00000569919 PSAPP07602 524 aa8.16□□□□□ -1.1
UBFD1-209ENST00000569919 TCF3P15923 654 aa8.16□□□□□ -1.1
UBFD1-209ENST00000569919 KDRP35968 1356 aa8.16□□□□□ -1.1
UBFD1-209ENST00000569919 CRKLP46109 303 aaKnown RBP8.16□□□□□ -1.1
UBFD1-209ENST00000569919 CABP4P57796 275 aa8.16□□□□□ -1.1
UBFD1-209ENST00000569919 MLLT1Q03111 559 aaPredicted RBP8.16□□□□□ -1.1
UBFD1-209ENST00000569919 LDLRAD1Q5T700 205 aa8.16□□□□□ -1.1
UBFD1-209ENST00000569919 ABHD8Q96I13 439 aa8.16□□□□□ -1.1
UBFD1-209ENST00000569919 OSBPL7Q9BZF2 842 aa8.16□□□□□ -1.1
UBFD1-209ENST00000569919 SRP68Q9UHB9 627 aaKnown RBP8.16□□□□□ -1.1
UBFD1-209ENST00000569919 NCAPD2Q15021 1401 aa8.15□□□□□ -1.1
UBFD1-209ENST00000569919 CNTNAP1P78357 1384 aa8.15□□□□□ -1.1
UBFD1-209ENST00000569919 EIF4BP23588 611 aaKnown RBP8.15□□□□□ -1.1
UBFD1-209ENST00000569919 VEGFBP49765 207 aa8.15□□□□□ -1.1
UBFD1-209ENST00000569919 RGS19P49795 217 aa8.15□□□□□ -1.1
UBFD1-209ENST00000569919 LBX1P52954 281 aa8.15□□□□□ -1.1
UBFD1-209ENST00000569919 PLEKHO1Q53GL0 409 aaPredicted RBP8.15□□□□□ -1.1
UBFD1-209ENST00000569919 TMEM87AQ8NBN3 555 aa8.15□□□□□ -1.1
UBFD1-209ENST00000569919 SALL4Q9UJQ4 1053 aa8.15□□□□□ -1.1
UBFD1-209ENST00000569919 PRR12Q9ULL5 1215 aa8.15□□□□□ -1.1
UBFD1-209ENST00000569919 ZNF831Q5JPB2 1677 aa8.14□□□□□ -1.11
UBFD1-209ENST00000569919 GIPC1O14908 333 aa8.14□□□□□ -1.11
UBFD1-209ENST00000569919 GADD45BO75293 160 aaPredicted RBP8.14□□□□□ -1.11
UBFD1-209ENST00000569919 SERPINB2P05120 415 aa8.14□□□□□ -1.11
UBFD1-209ENST00000569919 EDN3P14138 238 aa8.14□□□□□ -1.11
UBFD1-209ENST00000569919 SOX18P35713 384 aa8.14□□□□□ -1.11
UBFD1-209ENST00000569919 PLAURQ03405 335 aa8.14□□□□□ -1.11
UBFD1-209ENST00000569919 AMOTQ4VCS5 1084 aa8.14□□□□□ -1.11
UBFD1-209ENST00000569919 DHX32Q7L7V1 743 aaKnown RBP8.14□□□□□ -1.11
UBFD1-209ENST00000569919 C12orf49Q9H741 205 aa8.14□□□□□ -1.11
UBFD1-209ENST00000569919 LATS2Q9NRM7 1088 aa8.14□□□□□ -1.11
UBFD1-209ENST00000569919 NXF1Q9UBU9 619 aaKnown RBP8.14□□□□□ -1.11
UBFD1-209ENST00000569919 IQCA1LA6NCM1 817 aa8.13□□□□□ -1.11
UBFD1-209ENST00000569919 C2CD2LO14523 706 aa8.13□□□□□ -1.11
UBFD1-209ENST00000569919 MTHFSP49914 203 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms