RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 AEBP2Q6ZN18 517 aaPredicted RBP22.29■■□□□ 1.16
UBFD1-209ENST00000569919 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
UBFD1-209ENST00000569919 PHF23Q9BUL5 403 aaPredicted RBP19.57■□□□□ 0.72
UBFD1-209ENST00000569919 SENP3Q9H4L4 574 aaPredicted RBP18.82■□□□□ 0.6
UBFD1-209ENST00000569919 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
UBFD1-209ENST00000569919 FOXD1Q16676 465 aa17.44■□□□□ 0.38
UBFD1-209ENST00000569919 ADRA2BP18089 450 aa17.14■□□□□ 0.33
UBFD1-209ENST00000569919 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
UBFD1-209ENST00000569919 PIAS4Q8N2W9 510 aaPredicted RBP16.54■□□□□ 0.24
UBFD1-209ENST00000569919 KCNA4P22459 653 aa16.22■□□□□ 0.19
UBFD1-209ENST00000569919 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
UBFD1-209ENST00000569919 MSH5O43196 834 aa15.88■□□□□ 0.13
UBFD1-209ENST00000569919 NCBP3Q53F19 620 aaKnown RBP15.78■□□□□ 0.12
UBFD1-209ENST00000569919 SCAF1Q9H7N4 1312 aaKnown RBP15.65■□□□□ 0.1
UBFD1-209ENST00000569919 NPM3O75607 178 aaKnown RBP15.57■□□□□ 0.08
UBFD1-209ENST00000569919 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
UBFD1-209ENST00000569919 CNKSR2Q8WXI2 1034 aa15.54■□□□□ 0.08
UBFD1-209ENST00000569919 SLC4A1APQ9BWU0 796 aaKnown RBP15.51■□□□□ 0.07
UBFD1-209ENST00000569919 MAPK8IP2Q13387 824 aaPredicted RBP15.43■□□□□ 0.06
UBFD1-209ENST00000569919 CSRNP3Q8WYN3 585 aa15.2■□□□□ 0.02
UBFD1-209ENST00000569919 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
UBFD1-209ENST00000569919 DMRT2Q9Y5R5 561 aa15.1■□□□□ 0.01
UBFD1-209ENST00000569919 DNAJC5BQ9UF47 199 aa15.02■□□□□ -0
UBFD1-209ENST00000569919 NISCHQ9Y2I1 1504 aa14.96□□□□□ -0.02
UBFD1-209ENST00000569919 HOXD11P31277 338 aaPredicted RBP14.95□□□□□ -0.02
UBFD1-209ENST00000569919 ZBTB22O15209 634 aa14.93□□□□□ -0.02
UBFD1-209ENST00000569919 FOXD4L1Q9NU39 408 aa14.78□□□□□ -0.04
UBFD1-209ENST00000569919 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
UBFD1-209ENST00000569919 DCAF8L1A6NGE4 600 aa14.44□□□□□ -0.1
UBFD1-209ENST00000569919 POTEDQ86YR6 584 aa14.41□□□□□ -0.1
UBFD1-209ENST00000569919 MYCNP04198 464 aaPredicted RBP14.36□□□□□ -0.11
UBFD1-209ENST00000569919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.137e-12■■□□□ 11.6
UBFD1-209ENST00000569919 ATXN8OSP0DMR3 200 aa14.22□□□□□ -0.13
UBFD1-209ENST00000569919 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
UBFD1-209ENST00000569919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.17
UBFD1-209ENST00000569919 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.17
UBFD1-209ENST00000569919 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
UBFD1-209ENST00000569919 ATF5Q9Y2D1 282 aaPredicted RBP13.98□□□□□ -0.17
UBFD1-209ENST00000569919 ABCC9O60706 1549 aa13.9□□□□□ -0.19
UBFD1-209ENST00000569919 APLP2Q06481 763 aa13.76□□□□□ -0.21
UBFD1-209ENST00000569919 FKBP8Q14318 412 aa13.7□□□□□ -0.22
UBFD1-209ENST00000569919 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
UBFD1-209ENST00000569919 RNF39Q9H2S5 420 aa13.67□□□□□ -0.22
UBFD1-209ENST00000569919 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
UBFD1-209ENST00000569919 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
UBFD1-209ENST00000569919 CCDC180Q9P1Z9 1646 aa13.53□□□□□ -0.24
UBFD1-209ENST00000569919 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
UBFD1-209ENST00000569919 CAPN15O75808 1086 aa13.49□□□□□ -0.25
UBFD1-209ENST00000569919 POLA2Q14181 598 aa13.42□□□□□ -0.26
UBFD1-209ENST00000569919 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
UBFD1-209ENST00000569919 FBLN2P98095 1184 aa13.33□□□□□ -0.28
UBFD1-209ENST00000569919 SPDYE4A6NLX3 237 aa13.28□□□□□ -0.28
UBFD1-209ENST00000569919 ABCB7O75027 752 aa13.28□□□□□ -0.28
UBFD1-209ENST00000569919 RTN4Q9NQC3 1192 aaKnown RBP13.23□□□□□ -0.29
UBFD1-209ENST00000569919 AMER1Q5JTC6 1135 aaPredicted RBP13.22□□□□□ -0.29
UBFD1-209ENST00000569919 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
UBFD1-209ENST00000569919 DSG3P32926 999 aa13.16□□□□□ -0.3
UBFD1-209ENST00000569919 PROM2Q8N271 834 aa13.11□□□□□ -0.31
UBFD1-209ENST00000569919 RB1CC1Q8TDY2 1594 aa13.09□□□□□ -0.31
UBFD1-209ENST00000569919 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
UBFD1-209ENST00000569919 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
UBFD1-209ENST00000569919 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
UBFD1-209ENST00000569919 OSCARQ8IYS5 282 aa12.93□□□□□ -0.34
UBFD1-209ENST00000569919 NACADO15069 1562 aa12.93□□□□□ -0.34
UBFD1-209ENST00000569919 ZNF692Q9BU19 519 aaPredicted RBP12.91□□□□□ -0.34
UBFD1-209ENST00000569919 DCAF8L2P0C7V8 631 aa12.9□□□□□ -0.34
UBFD1-209ENST00000569919 VASPP50552 380 aaPredicted RBP12.9□□□□□ -0.34
UBFD1-209ENST00000569919 SPDYE2BA6NHP3 402 aa12.88□□□□□ -0.35
UBFD1-209ENST00000569919 SPDYE6P0CI01 402 aa12.88□□□□□ -0.35
UBFD1-209ENST00000569919 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
UBFD1-209ENST00000569919 SSUH2Q9Y2M2 353 aa12.83□□□□□ -0.36
UBFD1-209ENST00000569919 IFNLR1Q8IU57 520 aaPredicted RBP12.77□□□□□ -0.37
UBFD1-209ENST00000569919 UNC13AQ9UPW8 1703 aa12.7□□□□□ -0.38
UBFD1-209ENST00000569919 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
UBFD1-209ENST00000569919 BICRAQ9NZM4 1560 aa12.67□□□□□ -0.38
UBFD1-209ENST00000569919 MYO15BQ96JP2 1530 aa12.65□□□□□ -0.38
UBFD1-209ENST00000569919 SLC24A1O60721 1099 aa12.63□□□□□ -0.39
UBFD1-209ENST00000569919 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
UBFD1-209ENST00000569919 KLHL34Q8N239 644 aa12.6□□□□□ -0.39
UBFD1-209ENST00000569919 PLCD3Q8N3E9 789 aa12.58□□□□□ -0.4
UBFD1-209ENST00000569919 MIER1Q8N108 512 aa12.57□□□□□ -0.4
UBFD1-209ENST00000569919 CECR2Q9BXF3 1484 aa12.57□□□□□ -0.4
UBFD1-209ENST00000569919 SPOCK2Q92563 424 aa12.54□□□□□ -0.4
UBFD1-209ENST00000569919 SHROOM4Q9ULL8 1493 aa12.52□□□□□ -0.41
UBFD1-209ENST00000569919 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
UBFD1-209ENST00000569919 PKD2Q13563 968 aa12.51□□□□□ -0.41
UBFD1-209ENST00000569919 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
UBFD1-209ENST00000569919 AKT1S1Q96B36 256 aa12.45□□□□□ -0.42
UBFD1-209ENST00000569919 PLEKHG5O94827 1062 aa12.43□□□□□ -0.42
UBFD1-209ENST00000569919 EIF4G1Q04637 1599 aaKnown RBP12.41□□□□□ -0.42
UBFD1-209ENST00000569919 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
UBFD1-209ENST00000569919 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
UBFD1-209ENST00000569919 ECM2O94769 699 aaPredicted RBP12.35□□□□□ -0.43
UBFD1-209ENST00000569919 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
UBFD1-209ENST00000569919 DCAF1Q9Y4B6 1507 aa12.35□□□□□ -0.43
UBFD1-209ENST00000569919 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
UBFD1-209ENST00000569919 PRR29P0C7W0 189 aa12.29□□□□□ -0.44
UBFD1-209ENST00000569919 CIZ1Q9ULV3 898 aaPredicted RBP12.29□□□□□ -0.44
UBFD1-209ENST00000569919 SCRIBQ14160 1630 aa12.29□□□□□ -0.44
UBFD1-209ENST00000569919 ZCCHC6Q5VYS8 1495 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms