RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 LRCH3Q96II8 777 aa30.82■■■□□ 2.52
NME3-202ENST00000561637 PALD1Q9ULE6 856 aa30.82■■■□□ 2.52
NME3-202ENST00000561637 A0A0C4DFX4 3053 aa30.81■■■□□ 2.52
NME3-202ENST00000561637 INHAP05111 366 aa30.8■■■□□ 2.52
NME3-202ENST00000561637 PLCG2P16885 1265 aa30.8■■■□□ 2.52
NME3-202ENST00000561637 CLASRPQ8N2M8 674 aaKnown RBP30.8■■■□□ 2.52
NME3-202ENST00000561637 ATAD5Q96QE3 1844 aa30.8■■■□□ 2.52
NME3-202ENST00000561637 EVI5O60447 810 aa30.79■■■□□ 2.52
NME3-202ENST00000561637 DEFB118Q96PH6 123 aa30.79■■■□□ 2.52
NME3-202ENST00000561637 STAP2Q9UGK3 403 aa30.79■■■□□ 2.52
NME3-202ENST00000561637 TFRCP02786 760 aaKnown RBP30.78■■■□□ 2.52
NME3-202ENST00000561637 DNAJC2Q99543 621 aaKnown RBP30.78■■■□□ 2.52
NME3-202ENST00000561637 A0A1W2PPC1 479 aa30.77■■■□□ 2.52
NME3-202ENST00000561637 SMARCA5O60264 1052 aaPredicted RBP30.77■■■□□ 2.52
NME3-202ENST00000561637 IFIT2P09913 472 aaKnown RBP30.77■■■□□ 2.52
NME3-202ENST00000561637 CAP2P40123 477 aa30.77■■■□□ 2.52
NME3-202ENST00000561637 FASTKD5Q7L8L6 764 aaKnown RBP30.77■■■□□ 2.52
NME3-202ENST00000561637 PI4KBQ9UBF8 816 aa30.77■■■□□ 2.52
NME3-202ENST00000561637 GOLIM4O00461 696 aa30.76■■■□□ 2.51
NME3-202ENST00000561637 RAB11FIP3O75154 756 aa30.76■■■□□ 2.51
NME3-202ENST00000561637 SLFNL1Q499Z3 407 aa30.76■■■□□ 2.51
NME3-202ENST00000561637 TREML2Q5T2D2 321 aa30.76■■■□□ 2.51
NME3-202ENST00000561637 PXYLP1Q8TE99 480 aa30.76■■■□□ 2.51
NME3-202ENST00000561637 MAP3K12Q12852 859 aa30.75■■■□□ 2.51
NME3-202ENST00000561637 SPP2Q13103 211 aa30.75■■■□□ 2.51
NME3-202ENST00000561637 DHX36Q9H2U1 1008 aaKnown RBP30.75■■■□□ 2.51
NME3-202ENST00000561637 PAK6Q9NQU5 681 aaPredicted RBP30.75■■■□□ 2.51
NME3-202ENST00000561637 HERC5Q9UII4 1024 aaKnown RBP30.75■■■□□ 2.51
NME3-202ENST00000561637 TNPO2O14787 897 aaKnown RBP30.74■■■□□ 2.51
NME3-202ENST00000561637 PDE6AP16499 860 aa30.74■■■□□ 2.51
NME3-202ENST00000561637 IRF5Q13568 498 aa30.74■■■□□ 2.51
NME3-202ENST00000561637 PAWRQ96IZ0 340 aaKnown RBP30.74■■■□□ 2.51
NME3-202ENST00000561637 CRISPLD2Q9H0B8 497 aa30.74■■■□□ 2.51
NME3-202ENST00000561637 GDF11O95390 407 aa30.73■■■□□ 2.51
NME3-202ENST00000561637 RIOK1Q9BRS2 568 aaKnown RBP30.73■■■□□ 2.51
NME3-202ENST00000561637 CHMP4BQ9H444 224 aaKnown RBP30.73■■■□□ 2.51
NME3-202ENST00000561637 TAOK2Q9UL54 1235 aa30.73■■■□□ 2.51
NME3-202ENST00000561637 CHGBP05060 677 aa30.72■■■□□ 2.51
NME3-202ENST00000561637 EVX2Q03828 476 aa30.72■■■□□ 2.51
NME3-202ENST00000561637 METTL16Q86W50 562 aaKnown RBP30.72■■■□□ 2.51
NME3-202ENST00000561637 DIS3LQ8TF46 1054 aaKnown RBP30.72■■■□□ 2.51
NME3-202ENST00000561637 BOLA2Q9H3K6 86 aa30.72■■■□□ 2.51
NME3-202ENST00000561637 SLC45A1Q9Y2W3 748 aa30.72■■■□□ 2.51
NME3-202ENST00000561637 MYH1P12882 1939 aa30.72■■■□□ 2.51
NME3-202ENST00000561637 IGSF3O75054 1194 aa30.71■■■□□ 2.51
NME3-202ENST00000561637 USP5P45974 858 aa30.71■■■□□ 2.51
NME3-202ENST00000561637 HMGCS2P54868 508 aa30.71■■■□□ 2.51
NME3-202ENST00000561637 CRACR2BQ8N4Y2 399 aaPredicted RBP30.71■■■□□ 2.51
NME3-202ENST00000561637 ZNF280CQ8ND82 737 aa30.71■■■□□ 2.51
NME3-202ENST00000561637 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.71■■■□□ 2.51
NME3-202ENST00000561637 SLC9C2Q5TAH2 1124 aa30.7■■■□□ 2.51
NME3-202ENST00000561637 SMCR8Q8TEV9 937 aaPredicted RBP30.7■■■□□ 2.51
NME3-202ENST00000561637 AGTPBP1Q9UPW5 1226 aa30.7■■■□□ 2.51
NME3-202ENST00000561637 ZNF532Q9HCE3 1301 aa30.7■■■□□ 2.5
NME3-202ENST00000561637 LOC285556D6RIA3 1793 aa30.69■■■□□ 2.5
NME3-202ENST00000561637 TCRBV5S4A2TA0A5A2 114 aa30.69■■■□□ 2.5
NME3-202ENST00000561637 USP17L5A8MUK1 530 aa30.69■■■□□ 2.5
NME3-202ENST00000561637 ANKRD13CQ8N6S4 541 aa30.69■■■□□ 2.5
NME3-202ENST00000561637 DDX60LQ5H9U9 1706 aaKnown RBP30.68■■■□□ 2.5
NME3-202ENST00000561637 TTF1Q15361 905 aaPredicted RBP30.68■■■□□ 2.5
NME3-202ENST00000561637 FOXP4Q8IVH2 680 aaPredicted RBP30.68■■■□□ 2.5
NME3-202ENST00000561637 MAGEB6P1A0A0J9YX57 407 aa30.67■■■□□ 2.5
NME3-202ENST00000561637 YTHDC1Q96MU7 727 aaKnown RBP30.67■■■□□ 2.5
NME3-202ENST00000561637 GDF15Q99988 308 aa30.67■■■□□ 2.5
NME3-202ENST00000561637 LRRCC1Q9C099 1032 aa30.67■■■□□ 2.5
NME3-202ENST00000561637 PAG1Q9NWQ8 432 aa30.67■■■□□ 2.5
NME3-202ENST00000561637 HLA-DOAP06340 250 aa30.66■■■□□ 2.5
NME3-202ENST00000561637 CAPN2P17655 700 aa30.66■■■□□ 2.5
NME3-202ENST00000561637 ATP5JP18859 108 aa30.66■■■□□ 2.5
NME3-202ENST00000561637 MTMR2Q13614 643 aa30.66■■■□□ 2.5
NME3-202ENST00000561637 NECAB2Q7Z6G3 386 aa30.66■■■□□ 2.5
NME3-202ENST00000561637 LCORLQ8N3X6 602 aa30.66■■■□□ 2.5
NME3-202ENST00000561637 COA7Q96BR5 231 aa30.66■■■□□ 2.5
NME3-202ENST00000561637 TRIM34Q9BYJ4 488 aa30.66■■■□□ 2.5
NME3-202ENST00000561637 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.66■■■□□ 2.51e-12■■□□□ 11.8
NME3-202ENST00000561637 ZBTB21Q9ULJ3 1066 aa30.66■■■□□ 2.5
NME3-202ENST00000561637 ZMYND8Q9ULU4 1186 aaPredicted RBP30.65■■■□□ 2.5
NME3-202ENST00000561637 PCDHB15Q9Y5E8 787 aa30.65■■■□□ 2.5
NME3-202ENST00000561637 PLXNB2O15031 1838 aa30.65■■■□□ 2.5
NME3-202ENST00000561637 NAV1Q8NEY1 1877 aa30.65■■■□□ 2.5
NME3-202ENST00000561637 PLCD1P51178 756 aa30.64■■■□□ 2.5
NME3-202ENST00000561637 C7orf61Q8IZ16 206 aa30.64■■■□□ 2.5
NME3-202ENST00000561637 PROCA1Q8NCQ7 364 aaPredicted RBP30.64■■■□□ 2.5
NME3-202ENST00000561637 HAUS7Q99871 368 aa30.64■■■□□ 2.5
NME3-202ENST00000561637 ASNSP08243 561 aa30.63■■■□□ 2.49
NME3-202ENST00000561637 TSHZ3Q63HK5 1081 aa30.63■■■□□ 2.49
NME3-202ENST00000561637 SDR42E1Q8WUS8 393 aa30.63■■■□□ 2.49
NME3-202ENST00000561637 WDR18Q9BV38 432 aa30.63■■■□□ 2.49
NME3-202ENST00000561637 ARMT1Q9H993 441 aa30.63■■■□□ 2.49
NME3-202ENST00000561637 GH2P01242 217 aa30.62■■■□□ 2.49
NME3-202ENST00000561637 CYP2D6P10635 497 aa30.62■■■□□ 2.49
NME3-202ENST00000561637 BMP8BP34820 402 aa30.62■■■□□ 2.49
NME3-202ENST00000561637 RRP1P56182 461 aaKnown RBP30.62■■■□□ 2.49
NME3-202ENST00000561637 TRIM32Q13049 653 aa30.62■■■□□ 2.49
NME3-202ENST00000561637 FAM110CQ1W6H9 321 aa30.62■■■□□ 2.49
NME3-202ENST00000561637 SH3D19Q5HYK7 790 aa30.62■■■□□ 2.49
NME3-202ENST00000561637 DCTPP1Q9H773 170 aa30.62■■■□□ 2.49
NME3-202ENST00000561637 PRKAB2O43741 272 aa30.61■■■□□ 2.49
NME3-202ENST00000561637 PEX10O60683 326 aa30.61■■■□□ 2.49
NME3-202ENST00000561637 ADD2P35612 726 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms