RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 UBAC1Q9BSL1 405 aa17.51■□□□□ 0.39
VPS18-202ENST00000558474 TMEM39BQ9GZU3 492 aa17.51■□□□□ 0.39
VPS18-202ENST00000558474 TAF1DQ9H5J8 278 aaPredicted RBP17.51■□□□□ 0.39
VPS18-202ENST00000558474 INCENPQ9NQS7 918 aa17.51■□□□□ 0.39
VPS18-202ENST00000558474 SH2B1Q9NRF2 756 aaPredicted RBP17.51■□□□□ 0.39
VPS18-202ENST00000558474 GGA3Q9NZ52 723 aa17.51■□□□□ 0.39
VPS18-202ENST00000558474 POTECB2RU33 542 aa17.5■□□□□ 0.39
VPS18-202ENST00000558474 SH2B2O14492 632 aaPredicted RBP17.5■□□□□ 0.39
VPS18-202ENST00000558474 PRDM1O75626 825 aa17.5■□□□□ 0.39
VPS18-202ENST00000558474 CD2BP2O95400 341 aaKnown RBP17.5■□□□□ 0.39
VPS18-202ENST00000558474 TSPY3P0CV98 308 aa17.5■□□□□ 0.39
VPS18-202ENST00000558474 TSPY8P0CW00 308 aa17.5■□□□□ 0.39
VPS18-202ENST00000558474 SHMT1P34896 483 aa17.5■□□□□ 0.39
VPS18-202ENST00000558474 TFAP4Q01664 338 aa17.5■□□□□ 0.39
VPS18-202ENST00000558474 SGMS1Q86VZ5 419 aa17.5■□□□□ 0.39
VPS18-202ENST00000558474 DGKHQ86XP1 1220 aa17.5■□□□□ 0.39
VPS18-202ENST00000558474 ZSCAN10Q96SZ4 725 aaPredicted RBP17.5■□□□□ 0.39
VPS18-202ENST00000558474 GREB1LQ9C091 1923 aaPredicted RBP17.5■□□□□ 0.39
VPS18-202ENST00000558474 IFIT3O14879 490 aaKnown RBP17.49■□□□□ 0.39
VPS18-202ENST00000558474 VEGFAP15692 232 aaPredicted RBP17.49■□□□□ 0.39
VPS18-202ENST00000558474 RCAN1P53805 252 aa17.49■□□□□ 0.39
VPS18-202ENST00000558474 COL9A3Q14050 684 aaPredicted RBP17.49■□□□□ 0.39
VPS18-202ENST00000558474 SLC4A8Q2Y0W8 1093 aa17.49■□□□□ 0.39
VPS18-202ENST00000558474 TMEM67Q5HYA8 995 aa17.49■□□□□ 0.39
VPS18-202ENST00000558474 STK11IPQ8N1F8 1099 aa17.49■□□□□ 0.39
VPS18-202ENST00000558474 ANKS1AQ92625 1134 aa17.49■□□□□ 0.39
VPS18-202ENST00000558474 ZNF274Q96GC6 653 aaPredicted RBP17.49■□□□□ 0.39
VPS18-202ENST00000558474 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.49■□□□□ 0.39
VPS18-202ENST00000558474 GINM1Q9NU53 330 aa17.49■□□□□ 0.39
VPS18-202ENST00000558474 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
VPS18-202ENST00000558474 NOVP48745 357 aa17.48■□□□□ 0.39
VPS18-202ENST00000558474 WTAPQ15007 396 aa17.48■□□□□ 0.39
VPS18-202ENST00000558474 SEC23AQ15436 765 aa17.48■□□□□ 0.39
VPS18-202ENST00000558474 SUPT20HL1Q3ZLR7 823 aa17.48■□□□□ 0.39
VPS18-202ENST00000558474 CERKLQ49MI3 558 aaPredicted RBP17.48■□□□□ 0.39
VPS18-202ENST00000558474 DCAF15Q66K64 600 aa17.48■□□□□ 0.39
VPS18-202ENST00000558474 CHST3Q7LGC8 479 aa17.48■□□□□ 0.39
VPS18-202ENST00000558474 SLC44A5Q8NCS7 719 aa17.48■□□□□ 0.39
VPS18-202ENST00000558474 BRF1Q92994 677 aa17.48■□□□□ 0.39
VPS18-202ENST00000558474 DNAJC18Q9H819 358 aa17.48■□□□□ 0.39
VPS18-202ENST00000558474 LY9Q9HBG7 655 aa17.48■□□□□ 0.39
VPS18-202ENST00000558474 POLR2AP24928 1970 aaKnown RBP17.48■□□□□ 0.39
VPS18-202ENST00000558474 ASTN2O75129 1339 aaPredicted RBP17.47■□□□□ 0.39
VPS18-202ENST00000558474 TNKSO95271 1327 aa17.47■□□□□ 0.39
VPS18-202ENST00000558474 FAM47AQ5JRC9 791 aa17.47■□□□□ 0.39
VPS18-202ENST00000558474 SULF1Q8IWU6 871 aa17.47■□□□□ 0.39
VPS18-202ENST00000558474 TMX3Q96JJ7 454 aa17.47■□□□□ 0.39
VPS18-202ENST00000558474 TCEANC2Q96MN5 208 aa17.47■□□□□ 0.39
VPS18-202ENST00000558474 CUL4AQ13619 759 aa17.46■□□□□ 0.39
VPS18-202ENST00000558474 PPP2R5BQ15173 497 aa17.46■□□□□ 0.39
VPS18-202ENST00000558474 NKX2-3Q8TAU0 364 aa17.46■□□□□ 0.39
VPS18-202ENST00000558474 INTS4Q96HW7 963 aaKnown RBP17.46■□□□□ 0.39
VPS18-202ENST00000558474 LRRC2Q9BYS8 371 aa17.46■□□□□ 0.39
VPS18-202ENST00000558474 UTRNP46939 3433 aa17.45■□□□□ 0.38
VPS18-202ENST00000558474 NID2Q14112 1375 aa17.45■□□□□ 0.38
VPS18-202ENST00000558474 IGKV6D-41A0A0C4DH26 115 aa17.45■□□□□ 0.38
VPS18-202ENST00000558474 CCDC69A6NI79 296 aa17.45■□□□□ 0.38
VPS18-202ENST00000558474 IFIT1BQ5T764 474 aaKnown RBP17.45■□□□□ 0.38
VPS18-202ENST00000558474 SYNE3Q6ZMZ3 975 aa17.45■□□□□ 0.38
VPS18-202ENST00000558474 TMEM179Q6ZVK1 233 aa17.45■□□□□ 0.38
VPS18-202ENST00000558474 ENAHQ8N8S7 591 aaPredicted RBP17.45■□□□□ 0.38
VPS18-202ENST00000558474 CABP5Q9NP86 173 aa17.45■□□□□ 0.38
VPS18-202ENST00000558474 IL17RBQ9NRM6 502 aa17.45■□□□□ 0.38
VPS18-202ENST00000558474 TPCN1Q9ULQ1 816 aa17.45■□□□□ 0.38
VPS18-202ENST00000558474 PFKFB2O60825 505 aa17.44■□□□□ 0.38
VPS18-202ENST00000558474 CALM1P0DP23 149 aa17.44■□□□□ 0.38
VPS18-202ENST00000558474 CALM2P0DP24 149 aa17.44■□□□□ 0.38
VPS18-202ENST00000558474 CALM3P0DP25 149 aa17.44■□□□□ 0.38
VPS18-202ENST00000558474 AKR1B1P15121 316 aa17.44■□□□□ 0.38
VPS18-202ENST00000558474 APOBRQ0VD83 1088 aa17.44■□□□□ 0.38
VPS18-202ENST00000558474 ABCB5Q2M3G0 1257 aa17.44■□□□□ 0.38
VPS18-202ENST00000558474 NFXL1Q6ZNB6 911 aa17.44■□□□□ 0.38
VPS18-202ENST00000558474 CDC37L1Q7L3B6 337 aa17.44■□□□□ 0.38
VPS18-202ENST00000558474 MAP3K14Q99558 947 aa17.44■□□□□ 0.38
VPS18-202ENST00000558474 ZKSCAN3Q9BRR0 538 aa17.44■□□□□ 0.38
VPS18-202ENST00000558474 ZNF341Q9BYN7 854 aa17.44■□□□□ 0.38
VPS18-202ENST00000558474 KANSL2Q9H9L4 492 aa17.44■□□□□ 0.38
VPS18-202ENST00000558474 SYNPO2Q9UMS6 1093 aa17.44■□□□□ 0.38
VPS18-202ENST00000558474 KLF18A0A0U1RQI7 1052 aa17.43■□□□□ 0.38
VPS18-202ENST00000558474 PDIA3P30101 505 aaKnown RBP17.43■□□□□ 0.38
VPS18-202ENST00000558474 ME3Q16798 604 aa17.43■□□□□ 0.38
VPS18-202ENST00000558474 NBPF12Q5TAG4 269 aaPredicted RBP17.43■□□□□ 0.38
VPS18-202ENST00000558474 RCSD1Q6JBY9 416 aa17.43■□□□□ 0.38
VPS18-202ENST00000558474 APOA5Q6Q788 366 aa17.43■□□□□ 0.38
VPS18-202ENST00000558474 KRT26Q7Z3Y9 468 aa17.43■□□□□ 0.38
VPS18-202ENST00000558474 CATIPQ7Z7H3 387 aa17.43■□□□□ 0.38
VPS18-202ENST00000558474 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.43■□□□□ 0.38
VPS18-202ENST00000558474 MTMR4Q9NYA4 1195 aa17.43■□□□□ 0.38
VPS18-202ENST00000558474 ZNF112Q9UJU3 913 aa17.43■□□□□ 0.38
VPS18-202ENST00000558474 SLC12A7Q9Y666 1083 aa17.43■□□□□ 0.38
VPS18-202ENST00000558474 ATAD5Q96QE3 1844 aa17.42■□□□□ 0.38
VPS18-202ENST00000558474 PHF20L1A8MW92 1017 aa17.42■□□□□ 0.38
VPS18-202ENST00000558474 ZBTB43O43298 467 aa17.42■□□□□ 0.38
VPS18-202ENST00000558474 DHX16O60231 1041 aaKnown RBP17.42■□□□□ 0.38
VPS18-202ENST00000558474 CTNND1O60716 968 aaKnown RBP17.42■□□□□ 0.38
VPS18-202ENST00000558474 DDAH1O94760 285 aa17.42■□□□□ 0.38
VPS18-202ENST00000558474 TTLL1O95922 423 aa17.42■□□□□ 0.38
VPS18-202ENST00000558474 TOP1P11387 765 aaKnown RBP17.42■□□□□ 0.38
VPS18-202ENST00000558474 EAPPQ56P03 285 aaPredicted RBP17.42■□□□□ 0.38
VPS18-202ENST00000558474 LDHDQ86WU2 507 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms