RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 C7orf69Q9H7B7 122 aa9.39□□□□□ -0.91
RTF1-204ENST00000558117 KIDINS220Q9ULH0 1771 aa9.38□□□□□ -0.91
RTF1-204ENST00000558117 C1QTNF8P60827 252 aa9.38□□□□□ -0.91
RTF1-204ENST00000558117 LRRC14Q15048 493 aa9.38□□□□□ -0.91
RTF1-204ENST00000558117 PDZD3Q86UT5 571 aa9.38□□□□□ -0.91
RTF1-204ENST00000558117 ACTL7BQ9Y614 415 aa9.38□□□□□ -0.91
RTF1-204ENST00000558117 SYNGAP1Q96PV0 1343 aa9.37□□□□□ -0.91
RTF1-204ENST00000558117 FAM135AQ9P2D6 1515 aa9.37□□□□□ -0.91
RTF1-204ENST00000558117 ITSN2Q9NZM3 1697 aa9.37□□□□□ -0.91
RTF1-204ENST00000558117 IGLV1-40P01703 118 aa9.37□□□□□ -0.91
RTF1-204ENST00000558117 RAB6AP20340 208 aa9.37□□□□□ -0.91
RTF1-204ENST00000558117 BMP6P22004 513 aa9.37□□□□□ -0.91
RTF1-204ENST00000558117 ITGB7P26010 798 aa9.37□□□□□ -0.91
RTF1-204ENST00000558117 TAF1CQ15572 869 aaPredicted RBP9.37□□□□□ -0.91
RTF1-204ENST00000558117 RASIP1Q5U651 963 aa9.37□□□□□ -0.91
RTF1-204ENST00000558117 GGT6Q6P531 493 aa9.37□□□□□ -0.91
RTF1-204ENST00000558117 SV2BQ7L1I2 683 aa9.37□□□□□ -0.91
RTF1-204ENST00000558117 TRIM42Q8IWZ5 723 aa9.37□□□□□ -0.91
RTF1-204ENST00000558117 GRIN3AQ8TCU5 1115 aa9.37□□□□□ -0.91
RTF1-204ENST00000558117 FAM83CQ9BQN1 747 aa9.37□□□□□ -0.91
RTF1-204ENST00000558117 USP31Q70CQ4 1352 aa9.37□□□□□ -0.91
RTF1-204ENST00000558117 MAP3K1Q13233 1512 aa9.36□□□□□ -0.91
RTF1-204ENST00000558117 ZC3H13Q5T200 1668 aaKnown RBP9.36□□□□□ -0.91
RTF1-204ENST00000558117 BCL9LQ86UU0 1499 aa9.36□□□□□ -0.91
RTF1-204ENST00000558117 HMX2A2RU54 273 aa9.36□□□□□ -0.91
RTF1-204ENST00000558117 ID3Q02535 119 aa9.36□□□□□ -0.91
RTF1-204ENST00000558117 CCDC85BQ15834 202 aaPredicted RBP9.36□□□□□ -0.91
RTF1-204ENST00000558117 LLGL2Q6P1M3 1020 aa9.36□□□□□ -0.91
RTF1-204ENST00000558117 PAOXQ6QHF9 649 aa9.36□□□□□ -0.91
RTF1-204ENST00000558117 MPRIPQ6WCQ1 1025 aa9.36□□□□□ -0.91
RTF1-204ENST00000558117 SLC51AQ86UW1 340 aa9.36□□□□□ -0.91
RTF1-204ENST00000558117 FBLIM1Q8WUP2 373 aa9.36□□□□□ -0.91
RTF1-204ENST00000558117 WDR89Q96FK6 387 aaPredicted RBP9.36□□□□□ -0.91
RTF1-204ENST00000558117 PIDD1Q9HB75 910 aa9.36□□□□□ -0.91
RTF1-204ENST00000558117 NWD1Q149M9 1564 aa9.36□□□□□ -0.91
RTF1-204ENST00000558117 UGGT1Q9NYU2 1555 aa9.36□□□□□ -0.91
RTF1-204ENST00000558117 ATP7AQ04656 1500 aa9.36□□□□□ -0.91
RTF1-204ENST00000558117 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.35□□□□□ -0.91
RTF1-204ENST00000558117 FAM95CA0A1B0GW59 222 aa9.35□□□□□ -0.91
RTF1-204ENST00000558117 ZNF862O60290 1169 aa9.35□□□□□ -0.91
RTF1-204ENST00000558117 LMNB1P20700 586 aa9.35□□□□□ -0.91
RTF1-204ENST00000558117 ASPAP45381 313 aa9.35□□□□□ -0.91
RTF1-204ENST00000558117 NFKBIBQ15653 356 aa9.35□□□□□ -0.91
RTF1-204ENST00000558117 KIF4BQ2VIQ3 1234 aa9.35□□□□□ -0.91
RTF1-204ENST00000558117 ZMYM1Q5SVZ6 1142 aa9.35□□□□□ -0.91
RTF1-204ENST00000558117 PCNX4Q63HM2 1172 aa9.35□□□□□ -0.91
RTF1-204ENST00000558117 CDPF1Q6NVV7 123 aa9.35□□□□□ -0.91
RTF1-204ENST00000558117 DEFB132Q7Z7B7 95 aa9.35□□□□□ -0.91
RTF1-204ENST00000558117 CRELD1Q96HD1 420 aa9.35□□□□□ -0.91
RTF1-204ENST00000558117 DBNDD2Q9BQY9 259 aa9.35□□□□□ -0.91
RTF1-204ENST00000558117 ATXN3LQ9H3M9 355 aa9.35□□□□□ -0.91
RTF1-204ENST00000558117 TMPRSS2O15393 492 aa9.34□□□□□ -0.91
RTF1-204ENST00000558117 ZNF252P-AS1Q0IIN9 211 aa9.34□□□□□ -0.91
RTF1-204ENST00000558117 NFIAQ12857 509 aa9.34□□□□□ -0.91
RTF1-204ENST00000558117 MAP7Q14244 749 aa9.34□□□□□ -0.91
RTF1-204ENST00000558117 LDLRAD1Q5T700 205 aa9.34□□□□□ -0.91
RTF1-204ENST00000558117 RNF43Q68DV7 783 aa9.34□□□□□ -0.91
RTF1-204ENST00000558117 SHPRHQ149N8 1683 aa9.34□□□□□ -0.91
RTF1-204ENST00000558117 ARHGAP5Q13017 1502 aa9.34□□□□□ -0.91
RTF1-204ENST00000558117 NLRP1Q9C000 1473 aa9.34□□□□□ -0.91
RTF1-204ENST00000558117 MYO5CQ9NQX4 1742 aa9.34□□□□□ -0.92
RTF1-204ENST00000558117 SAMD9Q5K651 1589 aa9.33□□□□□ -0.92
RTF1-204ENST00000558117 MIA2Q96PC5 1412 aa9.33□□□□□ -0.92
RTF1-204ENST00000558117 UNCXA6NJT0 531 aa9.33□□□□□ -0.92
RTF1-204ENST00000558117 TRIM37O94972 964 aa9.33□□□□□ -0.92
RTF1-204ENST00000558117 ST13P50502 369 aaKnown RBP9.33□□□□□ -0.92
RTF1-204ENST00000558117 MAP3K11Q16584 847 aa9.33□□□□□ -0.92
RTF1-204ENST00000558117 GIMAP7Q8NHV1 300 aa9.33□□□□□ -0.92
RTF1-204ENST00000558117 GPBAR1Q8TDU6 330 aa9.33□□□□□ -0.92
RTF1-204ENST00000558117 FAM105AQ9NUU6 356 aa9.33□□□□□ -0.92
RTF1-204ENST00000558117 PPP1R9AQ9ULJ8 1098 aa9.33□□□□□ -0.92
RTF1-204ENST00000558117 CYP8B1Q9UNU6 501 aa9.33□□□□□ -0.92
RTF1-204ENST00000558117 TTBK2Q6IQ55 1244 aa9.32□□□□□ -0.92
RTF1-204ENST00000558117 CRIM1Q9NZV1 1036 aa9.32□□□□□ -0.92
RTF1-204ENST00000558117 SCO2A0A1W2PP80 73 aa9.31□□□□□ -0.92
RTF1-204ENST00000558117 SCARA3Q6AZY7 606 aa9.31□□□□□ -0.92
RTF1-204ENST00000558117 EZH1Q92800 747 aaPredicted RBP9.31□□□□□ -0.92
RTF1-204ENST00000558117 ZNF428Q96B54 188 aa9.31□□□□□ -0.92
RTF1-204ENST00000558117 C8orf37Q96NL8 207 aa9.31□□□□□ -0.92
RTF1-204ENST00000558117 FANCD2OSQ96PS1 177 aa9.31□□□□□ -0.92
RTF1-204ENST00000558117 BACH2Q9BYV9 841 aa9.31□□□□□ -0.92
RTF1-204ENST00000558117 PICK1Q9NRD5 415 aa9.31□□□□□ -0.92
RTF1-204ENST00000558117 DAGLAQ9Y4D2 1042 aa9.31□□□□□ -0.92
RTF1-204ENST00000558117 PLXNC1O60486 1568 aa9.31□□□□□ -0.92
RTF1-204ENST00000558117 BLMP54132 1417 aaPredicted RBP9.31□□□□□ -0.92
RTF1-204ENST00000558117 PZPP20742 1482 aa9.3□□□□□ -0.92
RTF1-204ENST00000558117 MFSD14AQ96MC6 490 aa9.3□□□□□ -0.92
RTF1-204ENST00000558117 GSX1Q9H4S2 264 aaPredicted RBP9.3□□□□□ -0.92
RTF1-204ENST00000558117 ACSS3Q9H6R3 686 aa9.3□□□□□ -0.92
RTF1-204ENST00000558117 F6X3S4 739 aa9.29□□□□□ -0.92
RTF1-204ENST00000558117 RNGTTO60942 597 aaKnown RBP9.29□□□□□ -0.92
RTF1-204ENST00000558117 NFICP08651 508 aa9.29□□□□□ -0.92
RTF1-204ENST00000558117 RLBP1P12271 317 aa9.29□□□□□ -0.92
RTF1-204ENST00000558117 KCNA6P17658 529 aa9.29□□□□□ -0.92
RTF1-204ENST00000558117 LTKP29376 864 aa9.29□□□□□ -0.92
RTF1-204ENST00000558117 FBXL6Q8N531 539 aa9.29□□□□□ -0.92
RTF1-204ENST00000558117 MRRFQ96E11 262 aaKnown RBP9.29□□□□□ -0.92
RTF1-204ENST00000558117 NOC4LQ9BVI4 516 aaKnown RBP9.29□□□□□ -0.92
RTF1-204ENST00000558117 SEMA6CQ9H3T2 930 aa9.29□□□□□ -0.92
RTF1-204ENST00000558117 CACNA2D2Q9NY47 1150 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms