RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 PPP4CP60510 307 aa12.49□□□□□ -0.41
PRKCH-227ENST00000557599 DIXDC1Q155Q3 683 aa12.49□□□□□ -0.41
PRKCH-227ENST00000557599 PRPF38BQ5VTL8 546 aaKnown RBP12.49□□□□□ -0.41
PRKCH-227ENST00000557599 TEX11Q8IYF3 940 aa12.49□□□□□ -0.41
PRKCH-227ENST00000557599 FAM43AQ8N2R8 423 aa12.49□□□□□ -0.41
PRKCH-227ENST00000557599 ERO1AQ96HE7 468 aa12.49□□□□□ -0.41
PRKCH-227ENST00000557599 ATP8A2Q9NTI2 1148 aa12.49□□□□□ -0.41
PRKCH-227ENST00000557599 TMOD2Q9NZR1 351 aa12.49□□□□□ -0.41
PRKCH-227ENST00000557599 DAGLAQ9Y4D2 1042 aa12.49□□□□□ -0.41
PRKCH-227ENST00000557599 GAKO14976 1311 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 GPR75-ASB3A0A0A6YYF3 556 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 HMGB1P09429 215 aaKnown RBP12.48□□□□□ -0.41
PRKCH-227ENST00000557599 MCM2P49736 904 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 GTF2A2P52657 109 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 DYNLL1P63167 89 aaKnown RBP12.48□□□□□ -0.41
PRKCH-227ENST00000557599 SP3Q02447 781 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 MOGSQ13724 837 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 NECTIN1Q15223 517 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 VPS53Q5VIR6 699 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 OTUD7BQ6GQQ9 843 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 RALYLQ86SE5 291 aaKnown RBP12.48□□□□□ -0.41
PRKCH-227ENST00000557599 ERO1BQ86YB8 467 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 IFNL3Q8IZI9 196 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 CD99L2Q8TCZ2 262 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 FAM151AQ8WW52 585 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 RIOK1Q9BRS2 568 aaKnown RBP12.48□□□□□ -0.41
PRKCH-227ENST00000557599 RNF41Q9H4P4 317 aaPredicted RBP12.48□□□□□ -0.41
PRKCH-227ENST00000557599 TRIM17Q9Y577 477 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 SNX14Q9Y5W7 946 aa12.48□□□□□ -0.41
PRKCH-227ENST00000557599 SIPA1L1O43166 1804 aa12.47□□□□□ -0.41
PRKCH-227ENST00000557599 CCL15-CCL14A0A0B4J2E2 113 aa12.47□□□□□ -0.41
PRKCH-227ENST00000557599 FGAP02671 866 aa12.47□□□□□ -0.41
PRKCH-227ENST00000557599 MAP3K10Q02779 954 aa12.47□□□□□ -0.41
PRKCH-227ENST00000557599 PPIL2Q13356 520 aa12.47□□□□□ -0.41
PRKCH-227ENST00000557599 CCL15Q16663 113 aa12.47□□□□□ -0.41
PRKCH-227ENST00000557599 NOL9Q5SY16 702 aaKnown RBP12.47□□□□□ -0.41
PRKCH-227ENST00000557599 BLOC1S2Q6QNY1 142 aa12.47□□□□□ -0.41
PRKCH-227ENST00000557599 ADGRA1Q86SQ6 560 aa12.47□□□□□ -0.41
PRKCH-227ENST00000557599 KCNB2Q92953 911 aa12.47□□□□□ -0.41
PRKCH-227ENST00000557599 JAKMIP1Q96N16 626 aaKnown RBP12.47□□□□□ -0.41
PRKCH-227ENST00000557599 TM6SF1Q9BZW5 370 aa12.47□□□□□ -0.41
PRKCH-227ENST00000557599 ARPP21Q9UBL0 812 aaPredicted RBP12.47□□□□□ -0.41
PRKCH-227ENST00000557599 FAM198AQ9UFP1 575 aa12.47□□□□□ -0.41
PRKCH-227ENST00000557599 CYP46A1Q9Y6A2 500 aa12.47□□□□□ -0.41
PRKCH-227ENST00000557599 LOC285556D6RIA3 1793 aa12.47□□□□□ -0.41
PRKCH-227ENST00000557599 COL2A1P02458 1487 aaPredicted RBP12.46□□□□□ -0.41
PRKCH-227ENST00000557599 FOCADQ5VW36 1801 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 GSG1L2A8MUP6 293 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 IRF6O14896 467 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 CASTP20810 708 aaKnown RBP12.46□□□□□ -0.41
PRKCH-227ENST00000557599 FGD1P98174 961 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 NFIAQ12857 509 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 TSGA10IPQ3SY00 556 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 CDC42EP5Q6NZY7 148 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 ZKSCAN4Q969J2 545 aaPredicted RBP12.46□□□□□ -0.41
PRKCH-227ENST00000557599 HOOK2Q96ED9 719 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 OTUD5Q96G74 571 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 WRNIP1Q96S55 665 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 IDI2Q9BXS1 227 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 CNNM2Q9H8M5 875 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 ZNF287Q9HBT7 754 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 KCNH4Q9UQ05 1017 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 CSADQ9Y600 493 aa12.46□□□□□ -0.41
PRKCH-227ENST00000557599 MGAMO43451 1857 aa12.46□□□□□ -0.42
PRKCH-227ENST00000557599 CDK5RAP2Q96SN8 1893 aa12.46□□□□□ -0.42
PRKCH-227ENST00000557599 POTEFA5A3E0 1075 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 PRKAB2O43741 272 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 TLR2O60603 784 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 POLR3DP05423 398 aaPredicted RBP12.45□□□□□ -0.42
PRKCH-227ENST00000557599 CYP21A2P08686 494 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 PCP11498 1178 aaKnown RBP12.45□□□□□ -0.42
PRKCH-227ENST00000557599 NEK4P51957 841 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 PPATQ06203 517 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 ANKRD1Q15327 319 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 NCOA7Q8NI08 942 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 SH3RF3Q8TEJ3 882 aaPredicted RBP12.45□□□□□ -0.42
PRKCH-227ENST00000557599 ZNF384Q8TF68 577 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 SDR42E1Q8WUS8 393 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 IL17RAQ96F46 866 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 ZNF333Q96JL9 665 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 NEK1Q96PY6 1258 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 EFCC1Q9HA90 598 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 USP40Q9NVE5 1235 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 MCM9Q9NXL9 1143 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 PALD1Q9ULE6 856 aa12.45□□□□□ -0.42
PRKCH-227ENST00000557599 ATAD5Q96QE3 1844 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 PHF20L1A8MW92 1017 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 MINDY4BA8MYZ0 360 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 BTBD19C9JJ37 291 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 HSP90AA1P07900 732 aaKnown RBP12.44□□□□□ -0.42
PRKCH-227ENST00000557599 CETPP11597 493 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 INPP5BP32019 993 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 NT5C2P49902 561 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 HAND2P61296 217 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 TAF1CQ15572 869 aaPredicted RBP12.44□□□□□ -0.42
PRKCH-227ENST00000557599 DCAF15Q66K64 600 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 MFSD6Q6ZSS7 791 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 TGFBRAP1Q8WUH2 860 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 SNX21Q969T3 373 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 IPO9Q96P70 1041 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms