RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 LIFRP42702 1097 aa17.52■□□□□ 0.4
TMEM55B-207ENST00000557041 POSTNQ15063 836 aa17.52■□□□□ 0.4
TMEM55B-207ENST00000557041 GPIHBP1Q8IV16 184 aa17.52■□□□□ 0.4
TMEM55B-207ENST00000557041 CNBD1Q8NA66 436 aa17.52■□□□□ 0.4
TMEM55B-207ENST00000557041 ERCC3P19447 782 aa17.52■□□□□ 0.4
TMEM55B-207ENST00000557041 ADKP55263 362 aaKnown RBP17.52■□□□□ 0.4
TMEM55B-207ENST00000557041 GSDMDP57764 484 aa17.52■□□□□ 0.4
TMEM55B-207ENST00000557041 KRBA2Q6ZNG9 492 aa17.52■□□□□ 0.4
TMEM55B-207ENST00000557041 C5P01031 1676 aa17.52■□□□□ 0.4
TMEM55B-207ENST00000557041 MPHOSPH10O00566 681 aaKnown RBP17.52■□□□□ 0.39
TMEM55B-207ENST00000557041 UFL1O94874 794 aa17.52■□□□□ 0.39
TMEM55B-207ENST00000557041 UBE4AQ14139 1066 aa17.52■□□□□ 0.39
TMEM55B-207ENST00000557041 CBFA2T2O43439 604 aa17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 CCT6AP40227 531 aaKnown RBP17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 RBM5P52756 815 aaKnown RBP eCLIP17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 AXDND1Q5T1B0 1012 aaPredicted RBP17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 TMX4Q9H1E5 349 aaPredicted RBP17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 ZNF804BA4D1E1 1349 aa17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 U2AF2P26368 475 aaKnown RBP eCLIP17.51■□□□□ 0.392e-7■■■■□ 24.6
TMEM55B-207ENST00000557041 NYXQ9GZU5 481 aa17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 SALL1Q9NSC2 1324 aa17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 AFDNP55196 1824 aaKnown RBP17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 USP17L3A6NCW0 530 aa17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 USP17L4A6NCW7 530 aa17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 NOM1Q5C9Z4 860 aaKnown RBP17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 USP17L1Q7RTZ2 530 aa17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 PPFIBP1Q86W92 1011 aa17.51■□□□□ 0.39
TMEM55B-207ENST00000557041 KIF1AQ12756 1690 aa17.5■□□□□ 0.39
TMEM55B-207ENST00000557041 TMEM232C9JQI7 657 aa17.5■□□□□ 0.39
TMEM55B-207ENST00000557041 PRR29P0C7W0 189 aa17.5■□□□□ 0.39
TMEM55B-207ENST00000557041 KARSQ15046 597 aaKnown RBP17.5■□□□□ 0.39
TMEM55B-207ENST00000557041 MRFAP1L1Q96HT8 127 aa17.5■□□□□ 0.39
TMEM55B-207ENST00000557041 MAP7D2Q96T17 732 aa17.5■□□□□ 0.39
TMEM55B-207ENST00000557041 TXLNAP40222 546 aa17.5■□□□□ 0.39
TMEM55B-207ENST00000557041 ZSCAN29Q8IWY8 852 aaPredicted RBP17.5■□□□□ 0.39
TMEM55B-207ENST00000557041 DPF2Q92785 391 aa17.5■□□□□ 0.39
TMEM55B-207ENST00000557041 FAM217BQ9NTX9 383 aaPredicted RBP17.5■□□□□ 0.39
TMEM55B-207ENST00000557041 BSDC1Q9NW68 430 aaPredicted RBP17.5■□□□□ 0.39
TMEM55B-207ENST00000557041 RRAGBQ5VZM2 374 aa17.49■□□□□ 0.39
TMEM55B-207ENST00000557041 TACC3Q9Y6A5 838 aa17.49■□□□□ 0.39
TMEM55B-207ENST00000557041 SSBP05455 408 aaKnown RBP eCLIP17.49■□□□□ 0.39
TMEM55B-207ENST00000557041 IKQ13123 557 aaPredicted RBP17.49■□□□□ 0.39
TMEM55B-207ENST00000557041 PTGDRQ13258 359 aa17.49■□□□□ 0.39
TMEM55B-207ENST00000557041 STAG1Q8WVM7 1258 aa17.49■□□□□ 0.39
TMEM55B-207ENST00000557041 ADAMTSL3P82987 1691 aa17.49■□□□□ 0.39
TMEM55B-207ENST00000557041 BAG3O95817 575 aa17.49■□□□□ 0.39
TMEM55B-207ENST00000557041 TTC38Q5R3I4 469 aa17.49■□□□□ 0.39
TMEM55B-207ENST00000557041 ARHGEF1Q92888 912 aaKnown RBP17.49■□□□□ 0.39
TMEM55B-207ENST00000557041 SRCAPQ6ZRS2 3230 aa17.49■□□□□ 0.39
TMEM55B-207ENST00000557041 SGMS1Q86VZ5 419 aa17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 DACH1Q9UI36 760 aa17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 RTL9Q8NET4 1388 aa17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 JCADQ9P266 1359 aa17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 NEMFO60524 1076 aa17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 TPM1P09493 284 aa17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 NTRK3Q16288 839 aa17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 CTR9Q6PD62 1173 aa17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 SAMSN1Q9NSI8 373 aaKnown RBP17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 KIF5BP33176 963 aa17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 UBA7P41226 1012 aa17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 NFIXQ14938 502 aa17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 FILIP1LQ4L180 1135 aa17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 SYMPKQ92797 1274 aaKnown RBP17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 DESI2Q9BSY9 194 aa17.48■□□□□ 0.39
TMEM55B-207ENST00000557041 ABCC12Q96J65 1359 aa17.47■□□□□ 0.39
TMEM55B-207ENST00000557041 MRC1P22897 1456 aa17.47■□□□□ 0.39
TMEM55B-207ENST00000557041 GNG11P61952 73 aa17.47■□□□□ 0.39
TMEM55B-207ENST00000557041 SOGA3Q5TF21 947 aa17.47■□□□□ 0.39
TMEM55B-207ENST00000557041 METTL16Q86W50 562 aaKnown RBP17.47■□□□□ 0.39
TMEM55B-207ENST00000557041 PNMA1Q8ND90 353 aa17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 ANKRD20A12PQ8NF67 263 aa17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 ANKRD2Q9GZV1 360 aa17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 VPS16Q9H269 839 aa17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 LZTFL1Q9NQ48 299 aa17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 ZNF215Q9UL58 517 aaPredicted RBP17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 RBM6P78332 1123 aaKnown RBP17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 TEX11Q8IYF3 940 aa17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 DCP1AQ9NPI6 582 aaPredicted RBP17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 N4BP3O15049 544 aa17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 PRKCSHP14314 528 aaPredicted RBP17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 ALX1Q15699 326 aa17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 LETM2Q2VYF4 491 aa17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 RBM43Q6ZSC3 357 aaKnown RBP17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 CCDC150Q8NCX0 1101 aa17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 UBA5Q9GZZ9 404 aa17.46■□□□□ 0.39
TMEM55B-207ENST00000557041 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.45■□□□□ 0.38
TMEM55B-207ENST00000557041 PPP6R2O75170 966 aa17.45■□□□□ 0.38
TMEM55B-207ENST00000557041 VEGFAP15692 232 aaPredicted RBP17.45■□□□□ 0.38
TMEM55B-207ENST00000557041 SPTY2D1Q68D10 685 aaPredicted RBP17.45■□□□□ 0.38
TMEM55B-207ENST00000557041 ZHX3Q9H4I2 956 aa17.45■□□□□ 0.38
TMEM55B-207ENST00000557041 NAPAP54920 295 aa17.45■□□□□ 0.38
TMEM55B-207ENST00000557041 EVCP57679 992 aa17.45■□□□□ 0.38
TMEM55B-207ENST00000557041 MAN1B1Q9UKM7 699 aa17.45■□□□□ 0.38
TMEM55B-207ENST00000557041 SCN11AQ9UI33 1791 aa17.45■□□□□ 0.38
TMEM55B-207ENST00000557041 STAT6P42226 847 aa17.45■□□□□ 0.38
TMEM55B-207ENST00000557041 TOB1P50616 345 aaPredicted RBP17.45■□□□□ 0.38
TMEM55B-207ENST00000557041 EARS2Q5JPH6 523 aaKnown RBP17.45■□□□□ 0.38
TMEM55B-207ENST00000557041 SH3RF3Q8TEJ3 882 aaPredicted RBP17.45■□□□□ 0.38
TMEM55B-207ENST00000557041 CTNND2Q9UQB3 1225 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms