RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 GUCY1A2P33402 732 aa12.89□□□□□ -0.35
GABRB3-211ENST00000556636 SLC44A5Q8NCS7 719 aa12.89□□□□□ -0.35
GABRB3-211ENST00000556636 ZNF280CQ8ND82 737 aa12.89□□□□□ -0.35
GABRB3-211ENST00000556636 DYNLL2Q96FJ2 89 aa12.89□□□□□ -0.35
GABRB3-211ENST00000556636 FSD1Q9BTV5 496 aa12.89□□□□□ -0.35
GABRB3-211ENST00000556636 GINM1Q9NU53 330 aa12.89□□□□□ -0.35
GABRB3-211ENST00000556636 ZBTB21Q9ULJ3 1066 aa12.89□□□□□ -0.35
GABRB3-211ENST00000556636 FOCADQ5VW36 1801 aa12.89□□□□□ -0.35
GABRB3-211ENST00000556636 LAMB1P07942 1786 aa12.89□□□□□ -0.35
GABRB3-211ENST00000556636 PATL2C9JE40 543 aaKnown RBP12.88□□□□□ -0.35
GABRB3-211ENST00000556636 PDHXO00330 501 aa12.88□□□□□ -0.35
GABRB3-211ENST00000556636 FOXP2O15409 715 aa12.88□□□□□ -0.35
GABRB3-211ENST00000556636 TLR2O60603 784 aa12.88□□□□□ -0.35
GABRB3-211ENST00000556636 FKTNO75072 461 aa12.88□□□□□ -0.35
GABRB3-211ENST00000556636 GH2P01242 217 aa12.88□□□□□ -0.35
GABRB3-211ENST00000556636 TAF1CQ15572 869 aaPredicted RBP12.88□□□□□ -0.35
GABRB3-211ENST00000556636 LRRFIP1Q32MZ4 808 aaKnown RBP12.88□□□□□ -0.35
GABRB3-211ENST00000556636 CERKLQ49MI3 558 aaPredicted RBP12.88□□□□□ -0.35
GABRB3-211ENST00000556636 SBK1Q52WX2 424 aa12.88□□□□□ -0.35
GABRB3-211ENST00000556636 SH3D19Q5HYK7 790 aa12.88□□□□□ -0.35
GABRB3-211ENST00000556636 GIMAP6Q6P9H5 292 aa12.88□□□□□ -0.35
GABRB3-211ENST00000556636 FASTKD5Q7L8L6 764 aaKnown RBP12.88□□□□□ -0.35
GABRB3-211ENST00000556636 TBC1D2Q9BYX2 928 aa12.88□□□□□ -0.35
GABRB3-211ENST00000556636 ZFYVE28Q9HCC9 887 aa12.88□□□□□ -0.35
GABRB3-211ENST00000556636 EPB41L4AQ9HCS5 686 aaPredicted RBP12.88□□□□□ -0.35
GABRB3-211ENST00000556636 DGKZQ13574 1117 aa12.87□□□□□ -0.35
GABRB3-211ENST00000556636 C17orf99Q6UX52 265 aa12.87□□□□□ -0.35
GABRB3-211ENST00000556636 TICAM2Q86XR7 235 aa12.87□□□□□ -0.35
GABRB3-211ENST00000556636 TRIM34Q9BYJ4 488 aa12.87□□□□□ -0.35
GABRB3-211ENST00000556636 MCOLN1Q9GZU1 580 aa12.87□□□□□ -0.35
GABRB3-211ENST00000556636 ADGRA2Q96PE1 1338 aa12.87□□□□□ -0.35
GABRB3-211ENST00000556636 GNAT2P19087 354 aa12.86□□□□□ -0.35
GABRB3-211ENST00000556636 CDK8P49336 464 aa12.86□□□□□ -0.35
GABRB3-211ENST00000556636 BACE1P56817 501 aa12.86□□□□□ -0.35
GABRB3-211ENST00000556636 SP3Q02447 781 aa12.86□□□□□ -0.35
GABRB3-211ENST00000556636 ABCB5Q2M3G0 1257 aa12.86□□□□□ -0.35
GABRB3-211ENST00000556636 TREML2Q5T2D2 321 aa12.86□□□□□ -0.35
GABRB3-211ENST00000556636 IFFO2Q5TF58 517 aa12.86□□□□□ -0.35
GABRB3-211ENST00000556636 CCDC129Q6ZRS4 1044 aa12.86□□□□□ -0.35
GABRB3-211ENST00000556636 C16orf86Q6ZW13 317 aa12.86□□□□□ -0.35
GABRB3-211ENST00000556636 SIAH1Q8IUQ4 282 aa12.86□□□□□ -0.35
GABRB3-211ENST00000556636 IFNL3Q8IZI9 196 aa12.86□□□□□ -0.35
GABRB3-211ENST00000556636 FAM227BQ96M60 508 aa12.86□□□□□ -0.35
GABRB3-211ENST00000556636 TAOK2Q9UL54 1235 aa12.86□□□□□ -0.35
GABRB3-211ENST00000556636 CYP2C8P10632 490 aa12.85□□□□□ -0.35
GABRB3-211ENST00000556636 HMGCS2P54868 508 aa12.85□□□□□ -0.35
GABRB3-211ENST00000556636 GADL1Q6ZQY3 521 aa12.85□□□□□ -0.35
GABRB3-211ENST00000556636 CTU1Q7Z7A3 348 aaKnown RBP12.85□□□□□ -0.35
GABRB3-211ENST00000556636 PROCA1Q8NCQ7 364 aaPredicted RBP12.85□□□□□ -0.35
GABRB3-211ENST00000556636 ACER1Q8TDN7 264 aa12.85□□□□□ -0.35
GABRB3-211ENST00000556636 AS3MTQ9HBK9 375 aa12.85□□□□□ -0.35
GABRB3-211ENST00000556636 HELLSQ9NRZ9 838 aa12.85□□□□□ -0.35
GABRB3-211ENST00000556636 EMILIN3Q9NT22 766 aa12.85□□□□□ -0.35
GABRB3-211ENST00000556636 SWAP70Q9UH65 585 aa12.85□□□□□ -0.35
GABRB3-211ENST00000556636 AGTPBP1Q9UPW5 1226 aa12.85□□□□□ -0.35
GABRB3-211ENST00000556636 SLC45A1Q9Y2W3 748 aa12.85□□□□□ -0.35
GABRB3-211ENST00000556636 MYH1P12882 1939 aa12.85□□□□□ -0.35
GABRB3-211ENST00000556636 PHIPQ8WWQ0 1821 aa12.85□□□□□ -0.35
GABRB3-211ENST00000556636 DDX60LQ5H9U9 1706 aaKnown RBP12.85□□□□□ -0.35
GABRB3-211ENST00000556636 A0A0D9SFI3 127 aa12.84□□□□□ -0.35
GABRB3-211ENST00000556636 TRIM6-TRIM34B2RNG4 842 aa12.84□□□□□ -0.35
GABRB3-211ENST00000556636 C19orf81C9J6K1 198 aa12.84□□□□□ -0.35
GABRB3-211ENST00000556636 USP17L10C9JJH3 530 aa12.84□□□□□ -0.35
GABRB3-211ENST00000556636 BCRP11274 1271 aa12.84□□□□□ -0.35
GABRB3-211ENST00000556636 SDSP20132 328 aa12.84□□□□□ -0.35
GABRB3-211ENST00000556636 MTMR2Q13614 643 aa12.84□□□□□ -0.35
GABRB3-211ENST00000556636 SEPT2Q15019 361 aa12.84□□□□□ -0.35
GABRB3-211ENST00000556636 VPS53Q5VIR6 699 aa12.84□□□□□ -0.35
GABRB3-211ENST00000556636 RILPL2Q969X0 211 aa12.84□□□□□ -0.35
GABRB3-211ENST00000556636 DDRGK1Q96HY6 314 aa12.84□□□□□ -0.35
GABRB3-211ENST00000556636 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.84□□□□□ -0.35
GABRB3-211ENST00000556636 ARPP21Q9UBL0 812 aaPredicted RBP12.84□□□□□ -0.35
GABRB3-211ENST00000556636 CPA4Q9UI42 421 aa12.84□□□□□ -0.35
GABRB3-211ENST00000556636 DOCK1Q14185 1865 aa12.84□□□□□ -0.35
GABRB3-211ENST00000556636 A0A1W2PRG0 241 aa12.83□□□□□ -0.36
GABRB3-211ENST00000556636 MINDY4BA8MYZ0 360 aa12.83□□□□□ -0.36
GABRB3-211ENST00000556636 AKR1B1P15121 316 aa12.83□□□□□ -0.36
GABRB3-211ENST00000556636 GSPT1P15170 499 aaKnown RBP12.83□□□□□ -0.36
GABRB3-211ENST00000556636 CTGFP29279 349 aa12.83□□□□□ -0.36
GABRB3-211ENST00000556636 HOXA7P31268 230 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-211ENST00000556636 NMIQ13287 307 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-211ENST00000556636 RAB3GAP1Q15042 981 aa12.83□□□□□ -0.36
GABRB3-211ENST00000556636 MCMDC2Q4G0Z9 681 aa12.83□□□□□ -0.36
GABRB3-211ENST00000556636 OTOP1Q7RTM1 612 aa12.83□□□□□ -0.36
GABRB3-211ENST00000556636 ZNF589Q86UQ0 364 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-211ENST00000556636 CD99L2Q8TCZ2 262 aa12.83□□□□□ -0.36
GABRB3-211ENST00000556636 ABHD8Q96I13 439 aa12.83□□□□□ -0.36
GABRB3-211ENST00000556636 CCDC17Q96LX7 622 aa12.83□□□□□ -0.36
GABRB3-211ENST00000556636 CABP5Q9NP86 173 aa12.83□□□□□ -0.36
GABRB3-211ENST00000556636 MYH7P12883 1935 aa12.83□□□□□ -0.36
GABRB3-211ENST00000556636 APPP05067 770 aa12.82□□□□□ -0.36
GABRB3-211ENST00000556636 RASA1P20936 1047 aa12.82□□□□□ -0.36
GABRB3-211ENST00000556636 ALX1Q15699 326 aa12.82□□□□□ -0.36
GABRB3-211ENST00000556636 PKN2Q16513 984 aaKnown RBP12.82□□□□□ -0.36
GABRB3-211ENST00000556636 TTC22Q5TAA0 569 aa12.82□□□□□ -0.36
GABRB3-211ENST00000556636 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
GABRB3-211ENST00000556636 TMEM179Q6ZVK1 233 aa12.82□□□□□ -0.36
GABRB3-211ENST00000556636 AMOTL1Q8IY63 956 aa12.82□□□□□ -0.36
GABRB3-211ENST00000556636 ERO1AQ96HE7 468 aa12.82□□□□□ -0.36
GABRB3-211ENST00000556636 C12orf42Q96LP6 360 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms