RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 LOC285556D6RIA3 1793 aa7.25□□□□□ -1.25
PRKCH-220ENST00000556164 ATRNL1Q5VV63 1379 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 A0A1W2PPC1 479 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 TRIM75PA6NK02 468 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 POM121CA8CG34 1229 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 PHF20L1A8MW92 1017 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 SOX1O00570 391 aaPredicted RBP7.24□□□□□ -1.25
PRKCH-220ENST00000556164 MDM2Q00987 491 aaPredicted RBP7.24□□□□□ -1.25
PRKCH-220ENST00000556164 ATP2B3Q16720 1220 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 B4GALNT3Q6L9W6 998 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 MRPL50Q8N5N7 158 aaKnown RBP7.24□□□□□ -1.25
PRKCH-220ENST00000556164 ANKRD13CQ8N6S4 541 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 PXYLP1Q8TE99 480 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 COA7Q96BR5 231 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 LRCH3Q96II8 777 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 USP44Q9H0E7 712 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 SIL1Q9H173 461 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 STAP2Q9UGK3 403 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 DENND2AQ9ULE3 1009 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 SLC45A1Q9Y2W3 748 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 AFG3L2Q9Y4W6 797 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 PTPRCP08575 1304 aa7.24□□□□□ -1.25
PRKCH-220ENST00000556164 RANBP2P49792 3224 aaKnown RBP7.23□□□□□ -1.25
PRKCH-220ENST00000556164 PLXNB2O15031 1838 aa7.23□□□□□ -1.25
PRKCH-220ENST00000556164 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.23□□□□□ -1.25
PRKCH-220ENST00000556164 ENTPD3O75355 529 aa7.23□□□□□ -1.25
PRKCH-220ENST00000556164 SLURP2P0DP57 97 aa7.23□□□□□ -1.25
PRKCH-220ENST00000556164 PHKA1P46020 1223 aa7.23□□□□□ -1.25
PRKCH-220ENST00000556164 RFX5P48382 616 aaPredicted RBP7.23□□□□□ -1.25
PRKCH-220ENST00000556164 PICALMQ13492 652 aa7.23□□□□□ -1.25
PRKCH-220ENST00000556164 TUSC1Q2TAM9 212 aa7.23□□□□□ -1.25
PRKCH-220ENST00000556164 ATG9AQ7Z3C6 839 aa7.23□□□□□ -1.25
PRKCH-220ENST00000556164 NECAB2Q7Z6G3 386 aa7.23□□□□□ -1.25
PRKCH-220ENST00000556164 CCDC84Q86UT8 332 aaPredicted RBP7.23□□□□□ -1.25
PRKCH-220ENST00000556164 DZIP1Q86YF9 867 aaKnown RBP7.23□□□□□ -1.25
PRKCH-220ENST00000556164 C7orf61Q8IZ16 206 aa7.23□□□□□ -1.25
PRKCH-220ENST00000556164 FAM9BQ8IZU0 186 aa7.23□□□□□ -1.25
PRKCH-220ENST00000556164 ZGPATQ8N5A5 531 aaKnown RBP7.23□□□□□ -1.25
PRKCH-220ENST00000556164 DIS3LQ8TF46 1054 aaKnown RBP7.23□□□□□ -1.25
PRKCH-220ENST00000556164 PAWRQ96IZ0 340 aaKnown RBP7.23□□□□□ -1.25
PRKCH-220ENST00000556164 IDI2Q9BXS1 227 aa7.23□□□□□ -1.25
PRKCH-220ENST00000556164 PAK6Q9NQU5 681 aaPredicted RBP7.23□□□□□ -1.25
PRKCH-220ENST00000556164 FAM217BQ9NTX9 383 aaPredicted RBP7.23□□□□□ -1.25
PRKCH-220ENST00000556164 CEP126Q9P2H0 1117 aa7.23□□□□□ -1.25
PRKCH-220ENST00000556164 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.23□□□□□ -1.25
PRKCH-220ENST00000556164 AGTPBP1Q9UPW5 1226 aa7.23□□□□□ -1.25
PRKCH-220ENST00000556164 SALL1Q9NSC2 1324 aa7.23□□□□□ -1.25
PRKCH-220ENST00000556164 RFX7Q2KHR2 1363 aa7.22□□□□□ -1.25
PRKCH-220ENST00000556164 DDTLA6NHG4 134 aaPredicted RBP7.22□□□□□ -1.25
PRKCH-220ENST00000556164 ANP32CO43423 234 aa7.22□□□□□ -1.25
PRKCH-220ENST00000556164 CTNND1O60716 968 aaKnown RBP7.22□□□□□ -1.25
PRKCH-220ENST00000556164 CAPN2P17655 700 aa7.22□□□□□ -1.25
PRKCH-220ENST00000556164 BTDP43251 543 aa7.22□□□□□ -1.25
PRKCH-220ENST00000556164 FAM110CQ1W6H9 321 aa7.22□□□□□ -1.25
PRKCH-220ENST00000556164 TREML2Q5T2D2 321 aa7.22□□□□□ -1.25
PRKCH-220ENST00000556164 SH3BP5LQ7L8J4 393 aa7.22□□□□□ -1.25
PRKCH-220ENST00000556164 SSH1Q8WYL5 1049 aa7.22□□□□□ -1.25
PRKCH-220ENST00000556164 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.22□□□□□ -1.25
PRKCH-220ENST00000556164 DDX4Q9NQI0 724 aaKnown RBP7.22□□□□□ -1.25
PRKCH-220ENST00000556164 ABCF2Q9UG63 623 aa7.22□□□□□ -1.25
PRKCH-220ENST00000556164 PNMA3Q9UL41 463 aa7.22□□□□□ -1.25
PRKCH-220ENST00000556164 ZMYND8Q9ULU4 1186 aaPredicted RBP7.22□□□□□ -1.25
PRKCH-220ENST00000556164 GAKO14976 1311 aa7.22□□□□□ -1.25
PRKCH-220ENST00000556164 FRMPD3Q5JV73 1810 aa7.22□□□□□ -1.25
PRKCH-220ENST00000556164 COL6A3P12111 3177 aa7.22□□□□□ -1.25
PRKCH-220ENST00000556164 CDK5RAP2Q96SN8 1893 aa7.21□□□□□ -1.25
PRKCH-220ENST00000556164 FAM196BA6NMK8 535 aa7.21□□□□□ -1.26
PRKCH-220ENST00000556164 CIAO1O76071 339 aa7.21□□□□□ -1.26
PRKCH-220ENST00000556164 HMGCRP04035 888 aa7.21□□□□□ -1.26
PRKCH-220ENST00000556164 UBTFL1P0CB47 393 aaPredicted RBP7.21□□□□□ -1.26
PRKCH-220ENST00000556164 ADORA1P30542 326 aa7.21□□□□□ -1.26
PRKCH-220ENST00000556164 ABL2P42684 1182 aa7.21□□□□□ -1.26
PRKCH-220ENST00000556164 RASGRF1Q13972 1273 aa7.21□□□□□ -1.26
PRKCH-220ENST00000556164 CCDC102BQ68D86 513 aa7.21□□□□□ -1.26
PRKCH-220ENST00000556164 SLF2Q8IX21 1173 aa7.21□□□□□ -1.26
PRKCH-220ENST00000556164 KIF12Q96FN5 646 aa7.21□□□□□ -1.26
PRKCH-220ENST00000556164 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.21□□□□□ -1.26
PRKCH-220ENST00000556164 MROH7-TTC4A0A0A0MT08 1334 aa7.21□□□□□ -1.26
PRKCH-220ENST00000556164 SIPA1L1O43166 1804 aa7.2□□□□□ -1.26
PRKCH-220ENST00000556164 FOCADQ5VW36 1801 aa7.2□□□□□ -1.26
PRKCH-220ENST00000556164 MAP3K13O43283 966 aa7.2□□□□□ -1.26
PRKCH-220ENST00000556164 ATG7O95352 703 aa7.2□□□□□ -1.26
PRKCH-220ENST00000556164 SYN1P17600 705 aa7.2□□□□□ -1.26
PRKCH-220ENST00000556164 IL15P40933 162 aaPredicted RBP7.2□□□□□ -1.26
PRKCH-220ENST00000556164 GCLCP48506 637 aaPredicted RBP7.2□□□□□ -1.26
PRKCH-220ENST00000556164 MAP3K10Q02779 954 aa7.2□□□□□ -1.26
PRKCH-220ENST00000556164 TRIM32Q13049 653 aa7.2□□□□□ -1.26
PRKCH-220ENST00000556164 SPP2Q13103 211 aa7.2□□□□□ -1.26
PRKCH-220ENST00000556164 PABPC4Q13310 644 aaKnown RBP eCLIP7.2□□□□□ -1.262e-7■■■■■ 64.2
PRKCH-220ENST00000556164 SPTY2D1Q68D10 685 aaPredicted RBP7.2□□□□□ -1.26
PRKCH-220ENST00000556164 DEFB123Q8N688 67 aa7.2□□□□□ -1.26
PRKCH-220ENST00000556164 ANKLE1Q8NAG6 615 aa7.2□□□□□ -1.26
PRKCH-220ENST00000556164 GDF15Q99988 308 aa7.2□□□□□ -1.26
PRKCH-220ENST00000556164 NBPF3Q9H094 633 aa7.2□□□□□ -1.26
PRKCH-220ENST00000556164 C11orf49Q9H6J7 331 aa7.2□□□□□ -1.26
PRKCH-220ENST00000556164 HMX1Q9NP08 348 aaPredicted RBP7.2□□□□□ -1.26
PRKCH-220ENST00000556164 KIAA1522Q9P206 1035 aaPredicted RBP7.2□□□□□ -1.26
PRKCH-220ENST00000556164 PA2G4Q9UQ80 394 aaKnown RBP7.2□□□□□ -1.26
PRKCH-220ENST00000556164 RPTORQ8N122 1335 aa7.2□□□□□ -1.26
PRKCH-220ENST00000556164 ZNF521Q96K83 1311 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms