RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 BCO2Q9BYV7 579 aa6.6□□□□□ -1.35
HCFC2-206ENST00000552343 PPM1HQ9ULR3 514 aa6.6□□□□□ -1.35
HCFC2-206ENST00000552343 NFIBO00712 420 aa6.59□□□□□ -1.35
HCFC2-206ENST00000552343 RLBP1P12271 317 aa6.59□□□□□ -1.35
HCFC2-206ENST00000552343 FAM161BQ96MY7 647 aa6.59□□□□□ -1.35
HCFC2-206ENST00000552343 IGF2BP3O00425 579 aaKnown RBP eCLIP6.58□□□□□ -1.36
HCFC2-206ENST00000552343 USP17L7P0C7H9 530 aa6.58□□□□□ -1.36
HCFC2-206ENST00000552343 ERCC5P28715 1186 aaPredicted RBP6.58□□□□□ -1.36
HCFC2-206ENST00000552343 ST13P50502 369 aaKnown RBP6.58□□□□□ -1.36
HCFC2-206ENST00000552343 PWP1Q13610 501 aa6.58□□□□□ -1.36
HCFC2-206ENST00000552343 GNL2Q13823 731 aaKnown RBP6.58□□□□□ -1.36
HCFC2-206ENST00000552343 TAF1CQ15572 869 aaPredicted RBP6.58□□□□□ -1.36
HCFC2-206ENST00000552343 NKPD1Q17RQ9 610 aa6.58□□□□□ -1.36
HCFC2-206ENST00000552343 TMEM67Q5HYA8 995 aa6.58□□□□□ -1.36
HCFC2-206ENST00000552343 PRPF40BQ6NWY9 871 aaKnown RBP6.58□□□□□ -1.36
HCFC2-206ENST00000552343 DTHD1Q6ZMT9 781 aa6.58□□□□□ -1.36
HCFC2-206ENST00000552343 CYFIP1Q7L576 1253 aa6.58□□□□□ -1.36
HCFC2-206ENST00000552343 HS2ST1Q7LGA3 356 aa6.58□□□□□ -1.36
HCFC2-206ENST00000552343 AMIGO3Q86WK7 504 aa6.58□□□□□ -1.36
HCFC2-206ENST00000552343 SETDB2Q96T68 719 aa6.58□□□□□ -1.36
HCFC2-206ENST00000552343 GTF2IRD1Q9UHL9 959 aa6.58□□□□□ -1.36
HCFC2-206ENST00000552343 PITPNM2Q9BZ72 1349 aa6.57□□□□□ -1.36
HCFC2-206ENST00000552343 TMEM238LA0A1B0GVL6 79 aa6.57□□□□□ -1.36
HCFC2-206ENST00000552343 ZC3H6P61129 1189 aaKnown RBP6.57□□□□□ -1.36
HCFC2-206ENST00000552343 HNRNPUQ00839 825 aaKnown RBP eCLIP6.57□□□□□ -1.36
HCFC2-206ENST00000552343 NXPE4Q6UWF7 544 aa6.57□□□□□ -1.36
HCFC2-206ENST00000552343 PDZD3Q86UT5 571 aa6.57□□□□□ -1.36
HCFC2-206ENST00000552343 FBXO15Q8NCQ5 510 aaPredicted RBP6.57□□□□□ -1.36
HCFC2-206ENST00000552343 KCNB2Q92953 911 aa6.57□□□□□ -1.36
HCFC2-206ENST00000552343 CEP44Q9C0F1 390 aa6.57□□□□□ -1.36
HCFC2-206ENST00000552343 IGSF5Q9NSI5 407 aa6.57□□□□□ -1.36
HCFC2-206ENST00000552343 NPIPB6E9PJ23 425 aa6.56□□□□□ -1.36
HCFC2-206ENST00000552343 INHBBP09529 407 aa6.56□□□□□ -1.36
HCFC2-206ENST00000552343 GRM2Q14416 872 aa6.56□□□□□ -1.36
HCFC2-206ENST00000552343 RNF214Q8ND24 703 aa6.56□□□□□ -1.36
HCFC2-206ENST00000552343 C8orf37Q96NL8 207 aa6.56□□□□□ -1.36
HCFC2-206ENST00000552343 DIRC2Q96SL1 478 aa6.56□□□□□ -1.36
HCFC2-206ENST00000552343 TTF2Q9UNY4 1162 aaKnown RBP6.56□□□□□ -1.36
HCFC2-206ENST00000552343 ZC3H12AQ5D1E8 599 aaKnown RBP6.55□□□□□ -1.36
HCFC2-206ENST00000552343 PI16Q6UXB8 463 aa6.55□□□□□ -1.36
HCFC2-206ENST00000552343 ANKRD24Q8TF21 1146 aa6.55□□□□□ -1.36
HCFC2-206ENST00000552343 NOC4LQ9BVI4 516 aaKnown RBP6.55□□□□□ -1.36
HCFC2-206ENST00000552343 OSBPL7Q9BZF2 842 aa6.55□□□□□ -1.36
HCFC2-206ENST00000552343 NSUN3Q9H649 340 aaKnown RBP6.55□□□□□ -1.36
HCFC2-206ENST00000552343 CCSER2Q9H7U1 834 aa6.55□□□□□ -1.36
HCFC2-206ENST00000552343 CARS2Q9HA77 564 aaKnown RBP6.55□□□□□ -1.36
HCFC2-206ENST00000552343 KCNK12Q9HB15 430 aa6.55□□□□□ -1.36
HCFC2-206ENST00000552343 PRDM10Q9NQV6 1147 aa6.55□□□□□ -1.36
HCFC2-206ENST00000552343 C19orf73Q9NVV2 129 aa6.55□□□□□ -1.36
HCFC2-206ENST00000552343 SAMM50Q9Y512 469 aa6.55□□□□□ -1.36
HCFC2-206ENST00000552343 USP31Q70CQ4 1352 aa6.55□□□□□ -1.36
HCFC2-206ENST00000552343 CLCN7P51798 805 aa6.54□□□□□ -1.36
HCFC2-206ENST00000552343 FCGRTP55899 365 aa6.54□□□□□ -1.36
HCFC2-206ENST00000552343 ERVK-24P63145 666 aa6.54□□□□□ -1.36
HCFC2-206ENST00000552343 TGIF2Q9GZN2 237 aa6.54□□□□□ -1.36
HCFC2-206ENST00000552343 GNAT3A8MTJ3 354 aa6.53□□□□□ -1.36
HCFC2-206ENST00000552343 TMEM253P0C7T8 217 aa6.53□□□□□ -1.36
HCFC2-206ENST00000552343 LMNB1P20700 586 aa6.53□□□□□ -1.36
HCFC2-206ENST00000552343 CTSWP56202 376 aa6.53□□□□□ -1.36
HCFC2-206ENST00000552343 FANCCQ00597 558 aa6.53□□□□□ -1.36
HCFC2-206ENST00000552343 PPP2R3AQ06190 1150 aa6.53□□□□□ -1.36
HCFC2-206ENST00000552343 SF3A1Q15459 793 aaKnown RBP6.53□□□□□ -1.36
HCFC2-206ENST00000552343 SV2BQ7L1I2 683 aa6.53□□□□□ -1.36
HCFC2-206ENST00000552343 STK35Q8TDR2 534 aa6.53□□□□□ -1.36
HCFC2-206ENST00000552343 CD320Q9NPF0 282 aa6.53□□□□□ -1.36
HCFC2-206ENST00000552343 AKAP2Q9Y2D5 859 aa6.53□□□□□ -1.36
HCFC2-206ENST00000552343 GDNFP39905 211 aa6.52□□□□□ -1.37
HCFC2-206ENST00000552343 HDLBPQ00341 1268 aaKnown RBP6.52□□□□□ -1.37
HCFC2-206ENST00000552343 CCDC85BQ15834 202 aaPredicted RBP6.52□□□□□ -1.37
HCFC2-206ENST00000552343 KCNA10Q16322 511 aa6.52□□□□□ -1.37
HCFC2-206ENST00000552343 NT5DC4Q86YG4 428 aa6.52□□□□□ -1.37
HCFC2-206ENST00000552343 ZNF654Q8IZM8 581 aa6.52□□□□□ -1.37
HCFC2-206ENST00000552343 TMEM39AQ9NV64 488 aa6.52□□□□□ -1.37
HCFC2-206ENST00000552343 GPN3Q9UHW5 284 aaPredicted RBP6.52□□□□□ -1.37
HCFC2-206ENST00000552343 GGT7Q9UJ14 662 aa6.52□□□□□ -1.37
HCFC2-206ENST00000552343 EOMESO95936 686 aa6.51□□□□□ -1.37
HCFC2-206ENST00000552343 CTSHP09668 335 aa6.51□□□□□ -1.37
HCFC2-206ENST00000552343 PPM1JQ5JR12 505 aa6.51□□□□□ -1.37
HCFC2-206ENST00000552343 ATG14Q6ZNE5 492 aa6.51□□□□□ -1.37
HCFC2-206ENST00000552343 UBE3DQ7Z6J8 389 aa6.51□□□□□ -1.37
HCFC2-206ENST00000552343 RELL1Q8IUW5 271 aa6.51□□□□□ -1.37
HCFC2-206ENST00000552343 ATP13A1Q9HD20 1204 aa6.51□□□□□ -1.37
HCFC2-206ENST00000552343 SEMA3GQ9NS98 782 aa6.51□□□□□ -1.37
HCFC2-206ENST00000552343 RNF19AQ9NV58 838 aa6.51□□□□□ -1.37
HCFC2-206ENST00000552343 NTF4P34130 210 aa6.5□□□□□ -1.37
HCFC2-206ENST00000552343 MAP1SQ66K74 1059 aaPredicted RBP6.5□□□□□ -1.37
HCFC2-206ENST00000552343 CIAPIN1Q6FI81 312 aa6.5□□□□□ -1.37
HCFC2-206ENST00000552343 USP48Q86UV5 1035 aa6.5□□□□□ -1.37
HCFC2-206ENST00000552343 VPS37DQ86XT2 251 aa6.5□□□□□ -1.37
HCFC2-206ENST00000552343 SULF2Q8IWU5 870 aa6.5□□□□□ -1.37
HCFC2-206ENST00000552343 GPBAR1Q8TDU6 330 aa6.5□□□□□ -1.37
HCFC2-206ENST00000552343 SPATA32Q96LK8 384 aa6.5□□□□□ -1.37
HCFC2-206ENST00000552343 C20orf173Q96LM9 149 aa6.5□□□□□ -1.37
HCFC2-206ENST00000552343 HSPA12BQ96MM6 686 aa6.5□□□□□ -1.37
HCFC2-206ENST00000552343 FOXQ1Q9C009 403 aa6.5□□□□□ -1.37
HCFC2-206ENST00000552343 DCP1AQ9NPI6 582 aaPredicted RBP6.5□□□□□ -1.37
HCFC2-206ENST00000552343 TTBK1Q5TCY1 1321 aaPredicted RBP6.5□□□□□ -1.37
HCFC2-206ENST00000552343 TCAF2A6NFQ2 919 aa6.49□□□□□ -1.37
HCFC2-206ENST00000552343 MED14OSP0DP75 135 aa6.49□□□□□ -1.37
HCFC2-206ENST00000552343 HOXA5P20719 270 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms