RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 ZNF827Q17R98 1081 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 CCDC102AQ96A19 550 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 BLZF1Q9H2G9 400 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 PCDHA7Q9UN72 937 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 FRMPD1Q5SYB0 1578 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 PFKFB1P16118 471 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 UBXN1Q04323 297 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 PNOCQ13519 176 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 KARSQ15046 597 aaKnown RBP13.18□□□□□ -0.3
LGR5-206ENST00000550851 TBC1D9BQ66K14 1250 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 BICD1Q96G01 975 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 NFE2L3Q9Y4A8 694 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 TMCO5BA8MYB1 307 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 TCP10L2B9ZVM9 353 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 MMP10P09238 476 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 FOXO4P98177 505 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 DYMQ7RTS9 669 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 DYNLL2Q96FJ2 89 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 CTAGE1Q96RT6 745 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 LZTFL1Q9NQ48 299 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 ZMYM6O95789 1325 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 SMCO2A6NFE2 343 aa13.17□□□□□ -0.3
LGR5-206ENST00000550851 PDE4DQ08499 809 aa13.17□□□□□ -0.3
LGR5-206ENST00000550851 CETN1Q12798 172 aa13.17□□□□□ -0.3
LGR5-206ENST00000550851 PPP2R5BQ15173 497 aa13.17□□□□□ -0.3
LGR5-206ENST00000550851 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
LGR5-206ENST00000550851 TMCO3Q6UWJ1 677 aa13.17□□□□□ -0.3
LGR5-206ENST00000550851 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
LGR5-206ENST00000550851 EEF2KMTQ96G04 330 aa13.17□□□□□ -0.3
LGR5-206ENST00000550851 JADE2Q9NQC1 790 aa13.17□□□□□ -0.3
LGR5-206ENST00000550851 SERTAD1Q9UHV2 236 aa13.17□□□□□ -0.3
LGR5-206ENST00000550851 PREX1Q8TCU6 1659 aa13.17□□□□□ -0.3
LGR5-206ENST00000550851 INF2Q27J81 1249 aa13.17□□□□□ -0.3
LGR5-206ENST00000550851 ARHGEF1Q92888 912 aaKnown RBP13.17□□□□□ -0.3
LGR5-206ENST00000550851 RRAGDQ9NQL2 400 aaPredicted RBP13.17□□□□□ -0.3
LGR5-206ENST00000550851 STRBPQ96SI9 672 aaKnown RBP13.17□□□□□ -0.3
LGR5-206ENST00000550851 LRWD1Q9UFC0 647 aa13.17□□□□□ -0.3
LGR5-206ENST00000550851 LEMD3Q9Y2U8 911 aa13.17□□□□□ -0.3
LGR5-206ENST00000550851 IQGAP1P46940 1657 aa13.17□□□□□ -0.3
LGR5-206ENST00000550851 CLRN2A0PK11 232 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 CLEC4GQ6UXB4 293 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 NIM1KQ8IY84 436 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 RASGRP4Q8TDF6 673 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 ATP8A2Q9NTI2 1148 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 CTNND2Q9UQB3 1225 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 NR5A1Q13285 461 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 TCHPQ9BT92 498 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 ZNF408Q9H9D4 720 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 ARHGEF10LQ9HCE6 1279 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.16□□□□□ -0.3
LGR5-206ENST00000550851 MINPP1Q9UNW1 487 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 DIP2AQ14689 1571 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 MED23Q9ULK4 1368 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 TRAF5O00463 557 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 MECOMQ03112 1051 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 PRPF4BQ13523 1007 aaKnown RBP13.16□□□□□ -0.3
LGR5-206ENST00000550851 SV2BQ7L1I2 683 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 MAEAQ7L5Y9 396 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 SNX29Q8TEQ0 813 aa13.16□□□□□ -0.3
LGR5-206ENST00000550851 ZC3H13Q5T200 1668 aaKnown RBP13.16□□□□□ -0.3
LGR5-206ENST00000550851 DDX39AO00148 427 aaKnown RBP13.15□□□□□ -0.3
LGR5-206ENST00000550851 PPEF1O14829 653 aaPredicted RBP13.15□□□□□ -0.3
LGR5-206ENST00000550851 ADCY7P51828 1080 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 CBX1P83916 185 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 POSTNQ15063 836 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 CCDC174Q6PII3 467 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 MARCH10Q8NA82 808 aaPredicted RBP13.15□□□□□ -0.3
LGR5-206ENST00000550851 TBC1D7Q9P0N9 293 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 NARFQ9UHQ1 456 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 RXRBP28702 533 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 PAFAH1B1P43034 410 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 CDR1P51861 262 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 NDUFA8P51970 172 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 SPICE1Q8N0Z3 855 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 BSDC1Q9NW68 430 aaPredicted RBP13.15□□□□□ -0.3
LGR5-206ENST00000550851 PUF60Q9UHX1 559 aaKnown RBP13.15□□□□□ -0.3
LGR5-206ENST00000550851 BACH1O14867 736 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 FAM13AO94988 1023 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 PLCD1P51178 756 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 FANCCQ00597 558 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 ATG9AQ7Z3C6 839 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 MYO6Q9UM54 1294 aa13.15□□□□□ -0.3
LGR5-206ENST00000550851 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.15□□□□□ -0.32e-7■■■□□ 18.9
LGR5-206ENST00000550851 COL15A1P39059 1388 aa13.15□□□□□ -0.31
LGR5-206ENST00000550851 BBOX1O75936 387 aa13.14□□□□□ -0.31
LGR5-206ENST00000550851 SCG2P13521 617 aa13.14□□□□□ -0.31
LGR5-206ENST00000550851 PDIA6Q15084 440 aa13.14□□□□□ -0.31
LGR5-206ENST00000550851 CERS3Q8IU89 383 aa13.14□□□□□ -0.31
LGR5-206ENST00000550851 KIFC2Q96AC6 838 aa13.14□□□□□ -0.31
LGR5-206ENST00000550851 KIAA1468Q9P260 1216 aa13.14□□□□□ -0.31
LGR5-206ENST00000550851 TECPR2O15040 1411 aa13.14□□□□□ -0.31
LGR5-206ENST00000550851 CARMIL3Q8ND23 1372 aa13.14□□□□□ -0.31
LGR5-206ENST00000550851 MROH2AA6NES4 1674 aa13.14□□□□□ -0.31
LGR5-206ENST00000550851 FLAD1Q8NFF5 587 aa13.14□□□□□ -0.31
LGR5-206ENST00000550851 IL25Q9H293 177 aa13.14□□□□□ -0.31
LGR5-206ENST00000550851 SOS2Q07890 1332 aaPredicted RBP13.14□□□□□ -0.31
LGR5-206ENST00000550851 NCAPH2Q6IBW4 605 aa13.14□□□□□ -0.31
LGR5-206ENST00000550851 BLIDQ8IZY5 108 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms