RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 FOXP4Q8IVH2 680 aaPredicted RBP11.65□□□□□ -0.54
TCF4-209ENST00000544241 CPLX3Q8WVH0 158 aa11.65□□□□□ -0.54
TCF4-209ENST00000544241 RIN2Q8WYP3 895 aaPredicted RBP11.65□□□□□ -0.54
TCF4-209ENST00000544241 ADD3Q9UEY8 706 aaKnown RBP11.65□□□□□ -0.54
TCF4-209ENST00000544241 PALLDQ8WX93 1383 aa11.65□□□□□ -0.54
TCF4-209ENST00000544241 ACEP12821 1306 aa11.65□□□□□ -0.54
TCF4-209ENST00000544241 RIMS1Q86UR5 1692 aaKnown RBP11.65□□□□□ -0.55
TCF4-209ENST00000544241 ANO9A1A5B4 782 aa11.65□□□□□ -0.55
TCF4-209ENST00000544241 MYO1FO00160 1098 aa11.65□□□□□ -0.55
TCF4-209ENST00000544241 NEBLO76041 1014 aa11.65□□□□□ -0.55
TCF4-209ENST00000544241 SCP2P22307 547 aa11.65□□□□□ -0.55
TCF4-209ENST00000544241 CDC27P30260 824 aa11.65□□□□□ -0.55
TCF4-209ENST00000544241 SARNPP82979 210 aaKnown RBP11.65□□□□□ -0.55
TCF4-209ENST00000544241 MAP2K1Q02750 393 aaPredicted RBP11.65□□□□□ -0.55
TCF4-209ENST00000544241 FMR1Q06787 632 aaKnown RBP eCLIP11.65□□□□□ -0.55
TCF4-209ENST00000544241 SPAG1Q07617 926 aa11.65□□□□□ -0.55
TCF4-209ENST00000544241 SNCBQ16143 134 aa11.65□□□□□ -0.55
TCF4-209ENST00000544241 TSR1Q2NL82 804 aaKnown RBP11.65□□□□□ -0.55
TCF4-209ENST00000544241 FBXO31Q5XUX0 539 aaPredicted RBP11.65□□□□□ -0.55
TCF4-209ENST00000544241 OTUD7BQ6GQQ9 843 aa11.65□□□□□ -0.55
TCF4-209ENST00000544241 EMBQ6PCB8 327 aa11.65□□□□□ -0.55
TCF4-209ENST00000544241 ZNF662Q6ZS27 426 aa11.65□□□□□ -0.55
TCF4-209ENST00000544241 VPS37DQ86XT2 251 aa11.65□□□□□ -0.55
TCF4-209ENST00000544241 FAM212AQ96EL1 285 aa11.65□□□□□ -0.55
TCF4-209ENST00000544241 SAMSN1Q9NSI8 373 aaKnown RBP11.65□□□□□ -0.55
TCF4-209ENST00000544241 ABHD10Q9NUJ1 306 aa11.65□□□□□ -0.55
TCF4-209ENST00000544241 TECPR2O15040 1411 aa11.64□□□□□ -0.55
TCF4-209ENST00000544241 ZMYM6O95789 1325 aa11.64□□□□□ -0.55
TCF4-209ENST00000544241 WDR19Q8NEZ3 1342 aa11.64□□□□□ -0.55
TCF4-209ENST00000544241 KRT86O43790 486 aa11.64□□□□□ -0.55
TCF4-209ENST00000544241 KRT83P78385 493 aa11.64□□□□□ -0.55
TCF4-209ENST00000544241 ACTN3Q08043 901 aaPredicted RBP11.64□□□□□ -0.55
TCF4-209ENST00000544241 TNNI3KQ59H18 835 aa11.64□□□□□ -0.55
TCF4-209ENST00000544241 AENQ8WTP8 325 aaKnown RBP11.64□□□□□ -0.55
TCF4-209ENST00000544241 SUCLG2Q96I99 432 aa11.64□□□□□ -0.55
TCF4-209ENST00000544241 EPN3Q9H201 632 aa11.64□□□□□ -0.55
TCF4-209ENST00000544241 FPGT-TNNI3KV9GXZ4 949 aa11.64□□□□□ -0.55
TCF4-209ENST00000544241 DIP2AQ14689 1571 aa11.64□□□□□ -0.55
TCF4-209ENST00000544241 KLF18A0A0U1RQI7 1052 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 KIF28PB7ZC32 967 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 IPO7O95373 1038 aaKnown RBP11.63□□□□□ -0.55
TCF4-209ENST00000544241 EPHB4P54760 987 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 ITIH3Q06033 890 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 C11orf91Q3C1V1 193 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 C3orf20Q8ND61 904 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 ACRBPQ8NEB7 543 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 NUP88Q99567 741 aaPredicted RBP11.63□□□□□ -0.55
TCF4-209ENST00000544241 ESF1Q9H501 851 aaKnown RBP11.63□□□□□ -0.55
TCF4-209ENST00000544241 COPRSQ9NQ92 184 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 KCNG1Q9UIX4 513 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 SAMM50Q9Y512 469 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 NCKAP5LQ9HCH0 1330 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 RASSF9O75901 435 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 GYPCP04921 128 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 HSPD1P10809 573 aaKnown RBP11.63□□□□□ -0.55
TCF4-209ENST00000544241 IMMTQ16891 758 aaKnown RBP11.63□□□□□ -0.55
TCF4-209ENST00000544241 ZNF579Q8NAF0 562 aaKnown RBP11.63□□□□□ -0.55
TCF4-209ENST00000544241 EDC3Q96F86 508 aaKnown RBP11.63□□□□□ -0.55
TCF4-209ENST00000544241 MAP3K14Q99558 947 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 CD248Q9HCU0 757 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 DBNLQ9UJU6 430 aaKnown RBP11.63□□□□□ -0.55
TCF4-209ENST00000544241 GUCA1BQ9UMX6 200 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 PTPRUQ92729 1446 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 SYNRGQ9UMZ2 1314 aa11.63□□□□□ -0.55
TCF4-209ENST00000544241 LAMA4Q16363 1823 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 TEX33O43247 280 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 NAP1L1P55209 391 aaKnown RBP11.62□□□□□ -0.55
TCF4-209ENST00000544241 SLC8A3P57103 927 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 NEXNQ0ZGT2 675 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 NNTQ13423 1086 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 WASHC4Q2M389 1173 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 NBPF9Q3BBW0 867 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 RNF187Q5TA31 235 aaPredicted RBP11.62□□□□□ -0.55
TCF4-209ENST00000544241 TXNDC2Q86VQ3 553 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 TRMT44Q8IYL2 757 aaKnown RBP11.62□□□□□ -0.55
TCF4-209ENST00000544241 FNBP4Q8N3X1 1017 aaPredicted RBP11.62□□□□□ -0.55
TCF4-209ENST00000544241 JAKMIP2Q96AA8 810 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 FAXDC2Q96IV6 333 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 MMS19Q96T76 1030 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 ALG1Q9BT22 464 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 BATF3Q9NR55 127 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 EPN1Q9Y6I3 576 aaPredicted RBP11.62□□□□□ -0.55
TCF4-209ENST00000544241 PPFIA3O75145 1194 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 NDUFA10O95299 355 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 HDGFP51858 240 aaKnown RBP11.62□□□□□ -0.55
TCF4-209ENST00000544241 CLNS1AP54105 237 aaKnown RBP11.62□□□□□ -0.55
TCF4-209ENST00000544241 SLC9C2Q5TAH2 1124 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 EMC10Q5UCC4 262 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 KDM7AQ6ZMT4 941 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 SND1Q7KZF4 910 aaKnown RBP eCLIP11.62□□□□□ -0.55
TCF4-209ENST00000544241 RALYLQ86SE5 291 aaKnown RBP11.62□□□□□ -0.55
TCF4-209ENST00000544241 KIAA1328Q86T90 577 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 SPATA20Q8TB22 786 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 P3H4Q92791 437 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 RSRC1Q96IZ7 334 aaKnown RBP11.62□□□□□ -0.55
TCF4-209ENST00000544241 ATP6V0A4Q9HBG4 840 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 CEP131Q9UPN4 1083 aa11.62□□□□□ -0.55
TCF4-209ENST00000544241 CWF19L2Q2TBE0 894 aaKnown RBP11.61□□□□□ -0.55
TCF4-209ENST00000544241 ZMYM1Q5SVZ6 1142 aa11.61□□□□□ -0.55
TCF4-209ENST00000544241 CDKAL1Q5VV42 579 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms