RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 ZNF34Q8IZ26 560 aa13.13□□□□□ -0.31
RFC5-209ENST00000543153 CNTROBQ8N137 903 aa13.13□□□□□ -0.31
RFC5-209ENST00000543153 PGBD3Q8N328 593 aa13.13□□□□□ -0.31
RFC5-209ENST00000543153 CRAMP1Q96RY5 1269 aa13.13□□□□□ -0.31
RFC5-209ENST00000543153 SAP130Q9H0E3 1048 aa13.13□□□□□ -0.31
RFC5-209ENST00000543153 SOWAHDA6NJG2 315 aa13.12□□□□□ -0.31
RFC5-209ENST00000543153 ICMTO60725 284 aa13.12□□□□□ -0.31
RFC5-209ENST00000543153 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
RFC5-209ENST00000543153 WDR43Q15061 677 aaKnown RBP eCLIP13.12□□□□□ -0.31
RFC5-209ENST00000543153 RALBP1Q15311 655 aa13.12□□□□□ -0.31
RFC5-209ENST00000543153 CCDC146Q8IYE0 955 aa13.12□□□□□ -0.31
RFC5-209ENST00000543153 GAS2L1Q99501 681 aaPredicted RBP13.12□□□□□ -0.31
RFC5-209ENST00000543153 ANO2Q9NQ90 1003 aa13.12□□□□□ -0.31
RFC5-209ENST00000543153 STIM2Q9P246 746 aa13.12□□□□□ -0.31
RFC5-209ENST00000543153 ANKIB1Q9P2G1 1089 aa13.12□□□□□ -0.31
RFC5-209ENST00000543153 H3BRB1 525 aa13.11□□□□□ -0.31
RFC5-209ENST00000543153 BRD2P25440 801 aaKnown RBP13.11□□□□□ -0.31
RFC5-209ENST00000543153 VEGFBP49765 207 aa13.11□□□□□ -0.31
RFC5-209ENST00000543153 PTSQ03393 145 aa13.11□□□□□ -0.31
RFC5-209ENST00000543153 AOC3Q16853 763 aa13.11□□□□□ -0.31
RFC5-209ENST00000543153 HSP90AB3PQ58FF7 597 aa13.11□□□□□ -0.31
RFC5-209ENST00000543153 SND1Q7KZF4 910 aaKnown RBP eCLIP13.11□□□□□ -0.31
RFC5-209ENST00000543153 TUT1Q9H6E5 874 aaKnown RBP13.11□□□□□ -0.31
RFC5-209ENST00000543153 PCNTO95613 3336 aa13.1□□□□□ -0.31
RFC5-209ENST00000543153 FAM13AO94988 1023 aa13.1□□□□□ -0.31
RFC5-209ENST00000543153 TMPOP42166 694 aaKnown RBP13.1□□□□□ -0.31
RFC5-209ENST00000543153 GRM1Q13255 1194 aa13.1□□□□□ -0.31
RFC5-209ENST00000543153 DGKZQ13574 1117 aa13.1□□□□□ -0.31
RFC5-209ENST00000543153 PROSER3Q2NL68 480 aa13.1□□□□□ -0.31
RFC5-209ENST00000543153 DPP8Q6V1X1 898 aaPredicted RBP13.1□□□□□ -0.31
RFC5-209ENST00000543153 SUPT20HQ8NEM7 779 aa13.1□□□□□ -0.31
RFC5-209ENST00000543153 XAGE3Q8WTP9 111 aa13.1□□□□□ -0.31
RFC5-209ENST00000543153 GPAMQ9HCL2 828 aa13.1□□□□□ -0.31
RFC5-209ENST00000543153 BIN2Q9UBW5 565 aaPredicted RBP13.1□□□□□ -0.31
RFC5-209ENST00000543153 TRMT112Q9UI30 125 aaKnown RBP13.1□□□□□ -0.31
RFC5-209ENST00000543153 NUP98P52948 1817 aa13.1□□□□□ -0.31
RFC5-209ENST00000543153 FOXN1O15353 648 aa13.09□□□□□ -0.31
RFC5-209ENST00000543153 HCLS1P14317 486 aaPredicted RBP13.09□□□□□ -0.31
RFC5-209ENST00000543153 ATP4AP20648 1035 aa13.09□□□□□ -0.31
RFC5-209ENST00000543153 CTCFP49711 727 aaPredicted RBP13.09□□□□□ -0.31
RFC5-209ENST00000543153 TMCO4Q5TGY1 634 aa13.09□□□□□ -0.31
RFC5-209ENST00000543153 DDX46Q7L014 1031 aaKnown RBP13.09□□□□□ -0.31
RFC5-209ENST00000543153 COPS6Q7L5N1 327 aa13.09□□□□□ -0.31
RFC5-209ENST00000543153 SLC51AQ86UW1 340 aa13.09□□□□□ -0.31
RFC5-209ENST00000543153 SNED1Q8TER0 1413 aa13.09□□□□□ -0.31
RFC5-209ENST00000543153 ZNF428Q96B54 188 aa13.09□□□□□ -0.31
RFC5-209ENST00000543153 BABAM1Q9NWV8 329 aa13.09□□□□□ -0.31
RFC5-209ENST00000543153 PODXL2Q9NZ53 605 aa13.09□□□□□ -0.31
RFC5-209ENST00000543153 LRFN2Q9ULH4 789 aa13.09□□□□□ -0.31
RFC5-209ENST00000543153 ATP6V0A2Q9Y487 856 aa13.09□□□□□ -0.31
RFC5-209ENST00000543153 ABCC4O15439 1325 aa13.09□□□□□ -0.31
RFC5-209ENST00000543153 MYBBP1AQ9BQG0 1328 aaKnown RBP13.09□□□□□ -0.31
RFC5-209ENST00000543153 EPS15P42566 896 aa13.08□□□□□ -0.32
RFC5-209ENST00000543153 MTMR3Q13615 1198 aa13.08□□□□□ -0.32
RFC5-209ENST00000543153 DEFB115Q30KQ5 88 aa13.08□□□□□ -0.32
RFC5-209ENST00000543153 KLK14Q9P0G3 267 aa13.08□□□□□ -0.32
RFC5-209ENST00000543153 COL4A5P29400 1685 aa13.08□□□□□ -0.32
RFC5-209ENST00000543153 SH3TC1Q8TE82 1336 aa13.08□□□□□ -0.32
RFC5-209ENST00000543153 SNRPBP14678 240 aaKnown RBP13.07□□□□□ -0.32
RFC5-209ENST00000543153 DDX10Q13206 875 aaKnown RBP13.07□□□□□ -0.32
RFC5-209ENST00000543153 RIPOR1Q6ZS17 1223 aa13.07□□□□□ -0.32
RFC5-209ENST00000543153 USP50Q70EL3 339 aaPredicted RBP13.07□□□□□ -0.32
RFC5-209ENST00000543153 NLRP10Q86W26 655 aa13.07□□□□□ -0.32
RFC5-209ENST00000543153 IFT43Q96FT9 208 aa13.07□□□□□ -0.32
RFC5-209ENST00000543153 BCL2L13Q9BXK5 485 aa13.07□□□□□ -0.32
RFC5-209ENST00000543153 DDX21Q9NR30 783 aaKnown RBP eCLIP13.07□□□□□ -0.32
RFC5-209ENST00000543153 CHPF2Q9P2E5 772 aa13.07□□□□□ -0.32
RFC5-209ENST00000543153 A0A1W2PNR3 127 aa13.06□□□□□ -0.32
RFC5-209ENST00000543153 SLC35F4A4IF30 521 aa13.06□□□□□ -0.32
RFC5-209ENST00000543153 RASSF10A6NK89 507 aa13.06□□□□□ -0.32
RFC5-209ENST00000543153 BBOX1O75936 387 aa13.06□□□□□ -0.32
RFC5-209ENST00000543153 KRT24Q2M2I5 525 aa13.06□□□□□ -0.32
RFC5-209ENST00000543153 EFHC2Q5JST6 749 aa13.06□□□□□ -0.32
RFC5-209ENST00000543153 ALKBH2Q6NS38 261 aa13.06□□□□□ -0.32
RFC5-209ENST00000543153 LRP10Q7Z4F1 713 aa13.06□□□□□ -0.32
RFC5-209ENST00000543153 ZIC5Q96T25 663 aa13.06□□□□□ -0.32
RFC5-209ENST00000543153 CRISPLD1Q9H336 500 aa13.06□□□□□ -0.32
RFC5-209ENST00000543153 ZNRF3Q9ULT6 936 aa13.06□□□□□ -0.32
RFC5-209ENST00000543153 ADAMTSL1Q8N6G6 1762 aa13.06□□□□□ -0.32
RFC5-209ENST00000543153 H7C1W4 665 aa13.05□□□□□ -0.32
RFC5-209ENST00000543153 TNFRSF10BO14763 440 aa13.05□□□□□ -0.32
RFC5-209ENST00000543153 MAP2K1Q02750 393 aaPredicted RBP13.05□□□□□ -0.32
RFC5-209ENST00000543153 TCIRG1Q13488 830 aa13.05□□□□□ -0.32
RFC5-209ENST00000543153 GRAPQ13588 217 aa13.05□□□□□ -0.32
RFC5-209ENST00000543153 SLC10A5Q5PT55 438 aa13.05□□□□□ -0.32
RFC5-209ENST00000543153 GRAPLQ8TC17 118 aaPredicted RBP13.05□□□□□ -0.32
RFC5-209ENST00000543153 RUNDC1Q96C34 613 aa13.05□□□□□ -0.32
RFC5-209ENST00000543153 SUSD3Q96L08 255 aa13.05□□□□□ -0.32
RFC5-209ENST00000543153 VPS33BQ9H267 617 aa13.05□□□□□ -0.32
RFC5-209ENST00000543153 RUBCNLQ9H714 662 aa13.05□□□□□ -0.32
RFC5-209ENST00000543153 ADARB2Q9NS39 739 aaKnown RBP13.05□□□□□ -0.32
RFC5-209ENST00000543153 GPRC5DQ9NZD1 345 aa13.05□□□□□ -0.32
RFC5-209ENST00000543153 WDR33Q9C0J8 1336 aaKnown RBP13.05□□□□□ -0.32
RFC5-209ENST00000543153 TRAF5O00463 557 aa13.04□□□□□ -0.32
RFC5-209ENST00000543153 RAD17O75943 681 aa13.04□□□□□ -0.32
RFC5-209ENST00000543153 NPR3P17342 541 aa13.04□□□□□ -0.32
RFC5-209ENST00000543153 ECE1P42892 770 aa13.04□□□□□ -0.32
RFC5-209ENST00000543153 GMPSP49915 693 aaPredicted RBP13.04□□□□□ -0.32
RFC5-209ENST00000543153 LBX1P52954 281 aa13.04□□□□□ -0.32
RFC5-209ENST00000543153 AAMPQ13685 434 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms