RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 ANKRD23Q86SG2 305 aa16.51■□□□□ 0.23
CD9-208ENST00000538834 ZSWIM8A7E2V4 1837 aa16.51■□□□□ 0.23
CD9-208ENST00000538834 MYH4Q9Y623 1939 aa16.51■□□□□ 0.23
CD9-208ENST00000538834 SMIM22K7EJ46 135 aa16.5■□□□□ 0.23
CD9-208ENST00000538834 GPAA1O43292 621 aa16.5■□□□□ 0.23
CD9-208ENST00000538834 ASNSP08243 561 aa16.5■□□□□ 0.23
CD9-208ENST00000538834 GUCY1A2P33402 732 aa16.5■□□□□ 0.23
CD9-208ENST00000538834 OTUD7BQ6GQQ9 843 aa16.5■□□□□ 0.23
CD9-208ENST00000538834 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
CD9-208ENST00000538834 SEC62Q99442 399 aaKnown RBP16.5■□□□□ 0.23
CD9-208ENST00000538834 EPB41L4AQ9HCS5 686 aaPredicted RBP16.5■□□□□ 0.23
CD9-208ENST00000538834 PICK1Q9NRD5 415 aa16.5■□□□□ 0.23
CD9-208ENST00000538834 MCM9Q9NXL9 1143 aa16.5■□□□□ 0.23
CD9-208ENST00000538834 ZBTB47Q9UFB7 747 aaPredicted RBP16.5■□□□□ 0.23
CD9-208ENST00000538834 SLC45A1Q9Y2W3 748 aa16.5■□□□□ 0.23
CD9-208ENST00000538834 USP17L5A8MUK1 530 aa16.49■□□□□ 0.23
CD9-208ENST00000538834 CYP2D6P10635 497 aa16.49■□□□□ 0.23
CD9-208ENST00000538834 CRHR2Q13324 411 aa16.49■□□□□ 0.23
CD9-208ENST00000538834 LRRFIP1Q32MZ4 808 aaKnown RBP16.49■□□□□ 0.23
CD9-208ENST00000538834 CCDC84Q86UT8 332 aaPredicted RBP16.49■□□□□ 0.23
CD9-208ENST00000538834 ZNF296Q8WUU4 475 aaPredicted RBP16.49■□□□□ 0.23
CD9-208ENST00000538834 ZBTB21Q9ULJ3 1066 aa16.49■□□□□ 0.23
CD9-208ENST00000538834 SLC4A4Q9Y6R1 1079 aa16.49■□□□□ 0.23
CD9-208ENST00000538834 LAMA4Q16363 1823 aa16.49■□□□□ 0.23
CD9-208ENST00000538834 ROBO3Q96MS0 1386 aa16.49■□□□□ 0.23
CD9-208ENST00000538834 PATL2C9JE40 543 aaKnown RBP16.48■□□□□ 0.23
CD9-208ENST00000538834 USP17L12C9JPN9 530 aa16.48■□□□□ 0.23
CD9-208ENST00000538834 USP17L21D6R901 530 aa16.48■□□□□ 0.23
CD9-208ENST00000538834 GNAT2P19087 354 aa16.48■□□□□ 0.23
CD9-208ENST00000538834 CAP1Q01518 475 aa16.48■□□□□ 0.23
CD9-208ENST00000538834 CRACR2BQ8N4Y2 399 aaPredicted RBP16.48■□□□□ 0.23
CD9-208ENST00000538834 ZNF280CQ8ND82 737 aa16.48■□□□□ 0.23
CD9-208ENST00000538834 FSD1Q9BTV5 496 aa16.48■□□□□ 0.23
CD9-208ENST00000538834 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.48■□□□□ 0.23
CD9-208ENST00000538834 TLR2O60603 784 aa16.47■□□□□ 0.23
CD9-208ENST00000538834 POLR3DP05423 398 aaPredicted RBP16.47■□□□□ 0.23
CD9-208ENST00000538834 C16orf86Q6ZW13 317 aa16.47■□□□□ 0.23
CD9-208ENST00000538834 FASTKD5Q7L8L6 764 aaKnown RBP16.47■□□□□ 0.23
CD9-208ENST00000538834 PROCA1Q8NCQ7 364 aaPredicted RBP16.47■□□□□ 0.23
CD9-208ENST00000538834 HELLSQ9NRZ9 838 aa16.47■□□□□ 0.23
CD9-208ENST00000538834 SWAP70Q9UH65 585 aa16.47■□□□□ 0.23
CD9-208ENST00000538834 CYP2D7A0A087X1C5 515 aa16.46■□□□□ 0.23
CD9-208ENST00000538834 GDF11O95390 407 aa16.46■□□□□ 0.23
CD9-208ENST00000538834 SPP2Q13103 211 aa16.46■□□□□ 0.23
CD9-208ENST00000538834 SLC4A8Q2Y0W8 1093 aa16.46■□□□□ 0.23
CD9-208ENST00000538834 CERKLQ49MI3 558 aaPredicted RBP16.46■□□□□ 0.23
CD9-208ENST00000538834 C17orf99Q6UX52 265 aa16.46■□□□□ 0.23
CD9-208ENST00000538834 ARPP21Q9UBL0 812 aaPredicted RBP16.46■□□□□ 0.23
CD9-208ENST00000538834 PDHXO00330 501 aa16.45■□□□□ 0.22
CD9-208ENST00000538834 FKTNO75072 461 aa16.45■□□□□ 0.22
CD9-208ENST00000538834 GH2P01242 217 aa16.45■□□□□ 0.22
CD9-208ENST00000538834 BACE1P56817 501 aa16.45■□□□□ 0.22
CD9-208ENST00000538834 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
CD9-208ENST00000538834 ALX1Q15699 326 aa16.45■□□□□ 0.22
CD9-208ENST00000538834 SIAH1Q8IUQ4 282 aa16.45■□□□□ 0.22
CD9-208ENST00000538834 IFNL3Q8IZI9 196 aa16.45■□□□□ 0.22
CD9-208ENST00000538834 SLC44A5Q8NCS7 719 aa16.45■□□□□ 0.22
CD9-208ENST00000538834 DYNLL2Q96FJ2 89 aa16.45■□□□□ 0.22
CD9-208ENST00000538834 C12orf42Q96LP6 360 aa16.45■□□□□ 0.22
CD9-208ENST00000538834 AS3MTQ9HBK9 375 aa16.45■□□□□ 0.22
CD9-208ENST00000538834 ZFYVE28Q9HCC9 887 aa16.45■□□□□ 0.22
CD9-208ENST00000538834 AGTPBP1Q9UPW5 1226 aa16.45■□□□□ 0.22
CD9-208ENST00000538834 A0A0D9SFI3 127 aa16.44■□□□□ 0.22
CD9-208ENST00000538834 TRIM75PA6NK02 468 aa16.44■□□□□ 0.22
CD9-208ENST00000538834 C19orf81C9J6K1 198 aa16.44■□□□□ 0.22
CD9-208ENST00000538834 GSPT1P15170 499 aaKnown RBP16.44■□□□□ 0.22
CD9-208ENST00000538834 HOXA7P31268 230 aaPredicted RBP16.44■□□□□ 0.22
CD9-208ENST00000538834 CDK8P49336 464 aa16.44■□□□□ 0.22
CD9-208ENST00000538834 FAM227BQ96M60 508 aa16.44■□□□□ 0.22
CD9-208ENST00000538834 PLXNB2O15031 1838 aa16.44■□□□□ 0.22
CD9-208ENST00000538834 CENPFP49454 3210 aa16.44■□□□□ 0.22
CD9-208ENST00000538834 BCRP11274 1271 aa16.43■□□□□ 0.22
CD9-208ENST00000538834 SDSP20132 328 aa16.43■□□□□ 0.22
CD9-208ENST00000538834 ABCB5Q2M3G0 1257 aa16.43■□□□□ 0.22
CD9-208ENST00000538834 CCDC17Q96LX7 622 aa16.43■□□□□ 0.22
CD9-208ENST00000538834 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.43■□□□□ 0.22
CD9-208ENST00000538834 EMILIN3Q9NT22 766 aa16.43■□□□□ 0.22
CD9-208ENST00000538834 A0A0G2JMZ2 1700 aa16.42■□□□□ 0.22
CD9-208ENST00000538834 USP17L10C9JJH3 530 aa16.42■□□□□ 0.22
CD9-208ENST00000538834 FGRP09769 529 aa16.42■□□□□ 0.22
CD9-208ENST00000538834 SP3Q02447 781 aa16.42■□□□□ 0.22
CD9-208ENST00000538834 MCMDC2Q4G0Z9 681 aa16.42■□□□□ 0.22
CD9-208ENST00000538834 TREML2Q5T2D2 321 aa16.42■□□□□ 0.22
CD9-208ENST00000538834 TTC22Q5TAA0 569 aa16.42■□□□□ 0.22
CD9-208ENST00000538834 CTU1Q7Z7A3 348 aaKnown RBP16.42■□□□□ 0.22
CD9-208ENST00000538834 TNS4Q8IZW8 715 aa16.42■□□□□ 0.22
CD9-208ENST00000538834 TRIM34Q9BYJ4 488 aa16.42■□□□□ 0.22
CD9-208ENST00000538834 KIAA1683Q9H0B3 1180 aa16.42■□□□□ 0.22
CD9-208ENST00000538834 ZNFX1Q9P2E3 1918 aaKnown RBP16.42■□□□□ 0.22
CD9-208ENST00000538834 COL11A1P12107 1806 aaPredicted RBP16.42■□□□□ 0.22
CD9-208ENST00000538834 ZMYM6O95789 1325 aa16.42■□□□□ 0.22
CD9-208ENST00000538834 A0A1W2PRG0 241 aa16.41■□□□□ 0.22
CD9-208ENST00000538834 RASA1P20936 1047 aa16.41■□□□□ 0.22
CD9-208ENST00000538834 HMGCS2P54868 508 aa16.41■□□□□ 0.22
CD9-208ENST00000538834 NMIQ13287 307 aaPredicted RBP16.41■□□□□ 0.22
CD9-208ENST00000538834 DGKZQ13574 1117 aa16.41■□□□□ 0.22
CD9-208ENST00000538834 SEPT2Q15019 361 aa16.41■□□□□ 0.22
CD9-208ENST00000538834 VPS53Q5VIR6 699 aa16.41■□□□□ 0.22
CD9-208ENST00000538834 CCDC129Q6ZRS4 1044 aa16.41■□□□□ 0.22
CD9-208ENST00000538834 TMEM179Q6ZVK1 233 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms