RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 SIAH1Q8IUQ4 282 aa10.15□□□□□ -0.78
SPARC-208ENST00000538026 DYNLL2Q96FJ2 89 aa10.15□□□□□ -0.78
SPARC-208ENST00000538026 ABHD8Q96I13 439 aa10.15□□□□□ -0.78
SPARC-208ENST00000538026 CRNKL1Q9BZJ0 848 aaKnown RBP10.15□□□□□ -0.78
SPARC-208ENST00000538026 EHD4Q9H223 541 aa10.15□□□□□ -0.78
SPARC-208ENST00000538026 RWDD1Q9H446 243 aaPredicted RBP10.15□□□□□ -0.78
SPARC-208ENST00000538026 EPB41L4AQ9HCS5 686 aaPredicted RBP10.15□□□□□ -0.78
SPARC-208ENST00000538026 PICK1Q9NRD5 415 aa10.15□□□□□ -0.78
SPARC-208ENST00000538026 ZBTB21Q9ULJ3 1066 aa10.15□□□□□ -0.78
SPARC-208ENST00000538026 LOC285556D6RIA3 1793 aa10.15□□□□□ -0.78
SPARC-208ENST00000538026 USP17L12C9JPN9 530 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 USP17L21D6R901 530 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 PDHXO00330 501 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 TLR2O60603 784 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 GH2P01242 217 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 CYP2C8P10632 490 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 TAF1CQ15572 869 aaPredicted RBP10.14□□□□□ -0.79
SPARC-208ENST00000538026 ZMYM1Q5SVZ6 1142 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 C12orf60Q5U649 245 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 CTR9Q6PD62 1173 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 ZNF280CQ8ND82 737 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 CD99L2Q8TCZ2 262 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 ACER1Q8TDN7 264 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 APPBP2Q92624 585 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 WDR18Q9BV38 432 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 ARHGAP39Q9C0H5 1083 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.14□□□□□ -0.79
SPARC-208ENST00000538026 ZCCHC17Q9NP64 241 aaKnown RBP10.14□□□□□ -0.79
SPARC-208ENST00000538026 MCM9Q9NXL9 1143 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 SERPINB13Q9UIV8 391 aa10.14□□□□□ -0.79
SPARC-208ENST00000538026 MYH8P13535 1937 aa10.13□□□□□ -0.79
SPARC-208ENST00000538026 USP17L5A8MUK1 530 aa10.13□□□□□ -0.79
SPARC-208ENST00000538026 GPAA1O43292 621 aa10.13□□□□□ -0.79
SPARC-208ENST00000538026 BCRP11274 1271 aa10.13□□□□□ -0.79
SPARC-208ENST00000538026 SH3D19Q5HYK7 790 aa10.13□□□□□ -0.79
SPARC-208ENST00000538026 OTOP1Q7RTM1 612 aa10.13□□□□□ -0.79
SPARC-208ENST00000538026 CTU1Q7Z7A3 348 aaKnown RBP10.13□□□□□ -0.79
SPARC-208ENST00000538026 GPATCH3Q96I76 525 aa10.13□□□□□ -0.79
SPARC-208ENST00000538026 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.13□□□□□ -0.79
SPARC-208ENST00000538026 OSBPL3Q9H4L5 887 aa10.13□□□□□ -0.79
SPARC-208ENST00000538026 EMILIN3Q9NT22 766 aa10.13□□□□□ -0.79
SPARC-208ENST00000538026 ATP8A2Q9NTI2 1148 aa10.13□□□□□ -0.79
SPARC-208ENST00000538026 CPA4Q9UI42 421 aa10.13□□□□□ -0.79
SPARC-208ENST00000538026 TACC3Q9Y6A5 838 aa10.13□□□□□ -0.79
SPARC-208ENST00000538026 SLC4A4Q9Y6R1 1079 aa10.13□□□□□ -0.79
SPARC-208ENST00000538026 MGAMO43451 1857 aa10.13□□□□□ -0.79
SPARC-208ENST00000538026 RLFQ13129 1914 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 GREB1LQ9C091 1923 aaPredicted RBP10.12□□□□□ -0.79
SPARC-208ENST00000538026 A0A1W2PRG0 241 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 ERC2O15083 957 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 PEX10O60683 326 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 CAPN15O75808 1086 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 POLR3DP05423 398 aaPredicted RBP10.12□□□□□ -0.79
SPARC-208ENST00000538026 HLA-DOAP06340 250 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 ASNSP08243 561 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 HMGCS2P54868 508 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 SP3Q02447 781 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 KIAA1755Q5JYT7 1200 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 OTUD7BQ6GQQ9 843 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 ZSCAN25Q6NSZ9 544 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 GADL1Q6ZQY3 521 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 CCDC129Q6ZRS4 1044 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 TTC6Q86TZ1 520 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 CRACR2BQ8N4Y2 399 aaPredicted RBP10.12□□□□□ -0.79
SPARC-208ENST00000538026 FAM227BQ96M60 508 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 ZFYVE28Q9HCC9 887 aa10.12□□□□□ -0.79
SPARC-208ENST00000538026 ZFYP08048 801 aaPredicted RBP10.11□□□□□ -0.79
SPARC-208ENST00000538026 AKR1B1P15121 316 aa10.11□□□□□ -0.79
SPARC-208ENST00000538026 CDK8P49336 464 aa10.11□□□□□ -0.79
SPARC-208ENST00000538026 BACE1P56817 501 aa10.11□□□□□ -0.79
SPARC-208ENST00000538026 MTMR2Q13614 643 aa10.11□□□□□ -0.79
SPARC-208ENST00000538026 SEPT2Q15019 361 aa10.11□□□□□ -0.79
SPARC-208ENST00000538026 CERKLQ49MI3 558 aaPredicted RBP10.11□□□□□ -0.79
SPARC-208ENST00000538026 SBK1Q52WX2 424 aa10.11□□□□□ -0.79
SPARC-208ENST00000538026 VPS53Q5VIR6 699 aa10.11□□□□□ -0.79
SPARC-208ENST00000538026 FASTKD5Q7L8L6 764 aaKnown RBP10.11□□□□□ -0.79
SPARC-208ENST00000538026 CLEC10AQ8IUN9 316 aa10.11□□□□□ -0.79
SPARC-208ENST00000538026 AGTPBP1Q9UPW5 1226 aa10.11□□□□□ -0.79
SPARC-208ENST00000538026 RANBP2P49792 3224 aaKnown RBP10.11□□□□□ -0.79
SPARC-208ENST00000538026 PDE4DIPQ5VU43 2346 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 A0A0D9SFI3 127 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 PATL2C9JE40 543 aaKnown RBP10.1□□□□□ -0.79
SPARC-208ENST00000538026 ABCB5Q2M3G0 1257 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 GIMAP6Q6P9H5 292 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 C16orf86Q6ZW13 317 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 ZNF589Q86UQ0 364 aaPredicted RBP10.1□□□□□ -0.79
SPARC-208ENST00000538026 SKAP1Q86WV1 359 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 IFNL3Q8IZI9 196 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 PROCA1Q8NCQ7 364 aaPredicted RBP10.1□□□□□ -0.79
SPARC-208ENST00000538026 NKX2-3Q8TAU0 364 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 EVI5LQ96CN4 794 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 TRIM47Q96LD4 638 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 FSD1Q9BTV5 496 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 INCENPQ9NQS7 918 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 GINM1Q9NU53 330 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 HPS5Q9UPZ3 1129 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 SLC45A1Q9Y2W3 748 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 TRIM17Q9Y577 477 aa10.1□□□□□ -0.79
SPARC-208ENST00000538026 ECM2O94769 699 aaPredicted RBP10.09□□□□□ -0.79
SPARC-208ENST00000538026 GSPT1P15170 499 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms