RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.46■□□□□ 0.55
SFSWAP-206ENST00000537582 FZD1Q9UP38 647 aa18.46■□□□□ 0.55
SFSWAP-206ENST00000537582 SH2B2O14492 632 aaPredicted RBP18.45■□□□□ 0.54
SFSWAP-206ENST00000537582 APOBRQ0VD83 1088 aa18.45■□□□□ 0.54
SFSWAP-206ENST00000537582 CLEC10AQ8IUN9 316 aa18.45■□□□□ 0.54
SFSWAP-206ENST00000537582 FOXP4Q8IVH2 680 aaPredicted RBP18.45■□□□□ 0.54
SFSWAP-206ENST00000537582 ZNF444Q8N0Y2 327 aaPredicted RBP18.45■□□□□ 0.54
SFSWAP-206ENST00000537582 IGDCC4Q8TDY8 1250 aa18.45■□□□□ 0.54
SFSWAP-206ENST00000537582 DCPSQ96C86 337 aaKnown RBP18.45■□□□□ 0.54
SFSWAP-206ENST00000537582 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.45■□□□□ 0.541e-6■■■■■ 34
SFSWAP-206ENST00000537582 IL17RBQ9NRM6 502 aa18.45■□□□□ 0.54
SFSWAP-206ENST00000537582 SWAP70Q9UH65 585 aa18.45■□□□□ 0.54
SFSWAP-206ENST00000537582 SSC5DA1L4H1 1573 aa18.45■□□□□ 0.54
SFSWAP-206ENST00000537582 PITPNM2Q9BZ72 1349 aa18.45■□□□□ 0.54
SFSWAP-206ENST00000537582 IFIT3O14879 490 aaKnown RBP18.44■□□□□ 0.54
SFSWAP-206ENST00000537582 GDF11O95390 407 aa18.44■□□□□ 0.54
SFSWAP-206ENST00000537582 TMEM67Q5HYA8 995 aa18.44■□□□□ 0.54
SFSWAP-206ENST00000537582 TATDN1Q6P1N9 297 aa18.44■□□□□ 0.54
SFSWAP-206ENST00000537582 TRIM34Q9BYJ4 488 aa18.44■□□□□ 0.54
SFSWAP-206ENST00000537582 LY9Q9HBG7 655 aa18.44■□□□□ 0.54
SFSWAP-206ENST00000537582 TPCN1Q9ULQ1 816 aa18.44■□□□□ 0.54
SFSWAP-206ENST00000537582 TNKSO95271 1327 aa18.44■□□□□ 0.54
SFSWAP-206ENST00000537582 DTNBO60941 627 aa18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 TSPY3P0CV98 308 aa18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 TSPY8P0CW00 308 aa18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 FGD1P98174 961 aa18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 KRT26Q7Z3Y9 468 aa18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 USP48Q86UV5 1035 aa18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 RAB11FIP4Q86YS3 637 aa18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 HSCBQ8IWL3 235 aa18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 ZSCAN10Q96SZ4 725 aaPredicted RBP18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 AGXT2Q9BYV1 514 aa18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 GLIS2Q9BZE0 524 aaPredicted RBP18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 ALDH8A1Q9H2A2 487 aaPredicted RBP18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 BRPF3Q9ULD4 1205 aa18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 WDR19Q8NEZ3 1342 aa18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 POLR2AP24928 1970 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-206ENST00000537582 VEGFAP15692 232 aaPredicted RBP18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 SEC23AQ15436 765 aa18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 SULF1Q8IWU6 871 aa18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 ENAHQ8N8S7 591 aaPredicted RBP18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 UBAC1Q9BSL1 405 aa18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 ZNF287Q9HBT7 754 aa18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 HERC5Q9UII4 1024 aaKnown RBP18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 K7ELQ4 463 aaPredicted RBP18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 MPHOSPH10O00566 681 aaKnown RBP18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 CERKLQ49MI3 558 aaPredicted RBP18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 MAP1SQ66K74 1059 aaPredicted RBP18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 PNMA8AQ86V59 439 aaPredicted RBP18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 NEDD1Q8NHV4 660 aa18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 ZC3H15Q8WU90 426 aaKnown RBP18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 TMX3Q96JJ7 454 aa18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 ANGEL1Q9UNK9 670 aaKnown RBP18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 CLEC11AQ9Y240 323 aa18.42■□□□□ 0.54
SFSWAP-206ENST00000537582 FMR1Q06787 632 aaKnown RBP eCLIP18.41■□□□□ 0.54
SFSWAP-206ENST00000537582 ST3GAL1Q11201 340 aa18.41■□□□□ 0.54
SFSWAP-206ENST00000537582 ME3Q16798 604 aa18.41■□□□□ 0.54
SFSWAP-206ENST00000537582 RCSD1Q6JBY9 416 aa18.41■□□□□ 0.54
SFSWAP-206ENST00000537582 NECAB1Q8N987 351 aa18.41■□□□□ 0.54
SFSWAP-206ENST00000537582 CEP95Q96GE4 821 aa18.41■□□□□ 0.54
SFSWAP-206ENST00000537582 TMEM87BQ96K49 555 aa18.41■□□□□ 0.54
SFSWAP-206ENST00000537582 MYL10Q9BUA6 226 aa18.41■□□□□ 0.54
SFSWAP-206ENST00000537582 LIMCH1Q9UPQ0 1083 aa18.41■□□□□ 0.54
SFSWAP-206ENST00000537582 PHF20L1A8MW92 1017 aa18.4■□□□□ 0.54
SFSWAP-206ENST00000537582 TBC1D12O60347 775 aa18.4■□□□□ 0.54
SFSWAP-206ENST00000537582 MAP3K10Q02779 954 aa18.4■□□□□ 0.54
SFSWAP-206ENST00000537582 STK3Q13188 491 aa18.4■□□□□ 0.54
SFSWAP-206ENST00000537582 PRKG1Q13976 671 aa18.4■□□□□ 0.54
SFSWAP-206ENST00000537582 WTAPQ15007 396 aa18.4■□□□□ 0.54
SFSWAP-206ENST00000537582 IQCA1Q86XH1 822 aa18.4■□□□□ 0.54
SFSWAP-206ENST00000537582 FBXL16Q8N461 479 aa18.4■□□□□ 0.54
SFSWAP-206ENST00000537582 SPRYD3Q8NCJ5 442 aa18.4■□□□□ 0.54
SFSWAP-206ENST00000537582 NAP1L2Q9ULW6 460 aaPredicted RBP18.4■□□□□ 0.54
SFSWAP-206ENST00000537582 PPP2R3BQ9Y5P8 575 aa18.4■□□□□ 0.54
SFSWAP-206ENST00000537582 PLIN4Q96Q06 1357 aa18.4■□□□□ 0.54
SFSWAP-206ENST00000537582 MYH8P13535 1937 aa18.4■□□□□ 0.54
SFSWAP-206ENST00000537582 IGKV6D-41A0A0C4DH26 115 aa18.39■□□□□ 0.53
SFSWAP-206ENST00000537582 KLF18A0A0U1RQI7 1052 aa18.39■□□□□ 0.53
SFSWAP-206ENST00000537582 GH2P01242 217 aa18.39■□□□□ 0.53
SFSWAP-206ENST00000537582 RXRAP19793 462 aa18.39■□□□□ 0.53
SFSWAP-206ENST00000537582 GUCY1A2P33402 732 aa18.39■□□□□ 0.53
SFSWAP-206ENST00000537582 CDCA5Q96FF9 252 aa18.39■□□□□ 0.53
SFSWAP-206ENST00000537582 FOXD4L1Q9NU39 408 aa18.39■□□□□ 0.53
SFSWAP-206ENST00000537582 TRAF5O00463 557 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 SEPT2Q15019 361 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 SART3Q15020 963 aaKnown RBP18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 ANKRD1Q15327 319 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 ABCB5Q2M3G0 1257 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 NFXL1Q6ZNB6 911 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 CCDC84Q86UT8 332 aaPredicted RBP18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 CHMP4CQ96CF2 233 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 IPO9Q96P70 1041 aaKnown RBP18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 GREB1LQ9C091 1923 aaPredicted RBP18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 ERICH2A1L162 156 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 PDIA3P30101 505 aaKnown RBP18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 INPP5BP32019 993 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 LIFRP42702 1097 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 MCM2P49736 904 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 BECN1Q14457 450 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms