RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 KCNMB1Q16558 191 aa5.35□□□□□ -1.55
SPARCL1-208ENST00000535835 TTLL10Q6ZVT0 673 aa5.35□□□□□ -1.55
SPARCL1-208ENST00000535835 ZNF507Q8TCN5 953 aa5.35□□□□□ -1.55
SPARCL1-208ENST00000535835 KRTAP9-8Q9BYQ0 159 aa5.35□□□□□ -1.55
SPARCL1-208ENST00000535835 CARS2Q9HA77 564 aaKnown RBP5.35□□□□□ -1.55
SPARCL1-208ENST00000535835 FAM53CQ9NYF3 392 aa5.35□□□□□ -1.55
SPARCL1-208ENST00000535835 SAMM50Q9Y512 469 aa5.35□□□□□ -1.55
SPARCL1-208ENST00000535835 GNAT3A8MTJ3 354 aa5.34□□□□□ -1.55
SPARCL1-208ENST00000535835 BRD1O95696 1058 aa5.34□□□□□ -1.55
SPARCL1-208ENST00000535835 MAPK8P45983 427 aa5.34□□□□□ -1.55
SPARCL1-208ENST00000535835 MLANAQ16655 118 aa5.34□□□□□ -1.55
SPARCL1-208ENST00000535835 ANKLE2Q86XL3 938 aa5.34□□□□□ -1.55
SPARCL1-208ENST00000535835 KCT2Q8NC54 265 aa5.34□□□□□ -1.55
SPARCL1-208ENST00000535835 PPP1R16BQ96T49 567 aa5.34□□□□□ -1.55
SPARCL1-208ENST00000535835 FOXQ1Q9C009 403 aa5.34□□□□□ -1.55
SPARCL1-208ENST00000535835 WNT10AQ9GZT5 417 aa5.34□□□□□ -1.55
SPARCL1-208ENST00000535835 C12orf49Q9H741 205 aa5.34□□□□□ -1.55
SPARCL1-208ENST00000535835 JAG2Q9Y219 1238 aa5.34□□□□□ -1.55
SPARCL1-208ENST00000535835 CAPN6Q9Y6Q1 641 aa5.34□□□□□ -1.55
SPARCL1-208ENST00000535835 PRAMEF27A3QJZ7 478 aa5.33□□□□□ -1.56
SPARCL1-208ENST00000535835 GIPC1O14908 333 aa5.33□□□□□ -1.56
SPARCL1-208ENST00000535835 USP17L7P0C7H9 530 aa5.33□□□□□ -1.56
SPARCL1-208ENST00000535835 PDE4CQ08493 712 aa5.33□□□□□ -1.56
SPARCL1-208ENST00000535835 PRR23BQ6ZRT6 265 aa5.33□□□□□ -1.56
SPARCL1-208ENST00000535835 CDC37L1Q7L3B6 337 aa5.33□□□□□ -1.56
SPARCL1-208ENST00000535835 ELMO3Q96BJ8 720 aa5.33□□□□□ -1.56
SPARCL1-208ENST00000535835 ASB16Q96NS5 453 aa5.33□□□□□ -1.56
SPARCL1-208ENST00000535835 PICK1Q9NRD5 415 aa5.33□□□□□ -1.56
SPARCL1-208ENST00000535835 GFRA2O00451 464 aa5.32□□□□□ -1.56
SPARCL1-208ENST00000535835 TSPAN15O95858 294 aa5.32□□□□□ -1.56
SPARCL1-208ENST00000535835 GLI1P08151 1106 aa5.32□□□□□ -1.56
SPARCL1-208ENST00000535835 AFMP43652 599 aa5.32□□□□□ -1.56
SPARCL1-208ENST00000535835 FGD1P98174 961 aa5.32□□□□□ -1.56
SPARCL1-208ENST00000535835 ALG1LQ6GMV1 187 aa5.32□□□□□ -1.56
SPARCL1-208ENST00000535835 MFSD4AQ8N468 514 aa5.32□□□□□ -1.56
SPARCL1-208ENST00000535835 MIPEPQ99797 713 aa5.32□□□□□ -1.56
SPARCL1-208ENST00000535835 H3BS24 57 aa5.31□□□□□ -1.56
SPARCL1-208ENST00000535835 P4HBP07237 508 aaKnown RBP5.31□□□□□ -1.56
SPARCL1-208ENST00000535835 GDNFP39905 211 aa5.31□□□□□ -1.56
SPARCL1-208ENST00000535835 WIPI1Q5MNZ9 446 aaPredicted RBP5.31□□□□□ -1.56
SPARCL1-208ENST00000535835 SFRP5Q5T4F7 317 aa5.31□□□□□ -1.56
SPARCL1-208ENST00000535835 CDKAL1Q5VV42 579 aa5.31□□□□□ -1.56
SPARCL1-208ENST00000535835 SV2BQ7L1I2 683 aa5.31□□□□□ -1.56
SPARCL1-208ENST00000535835 HDXQ7Z353 690 aa5.31□□□□□ -1.56
SPARCL1-208ENST00000535835 KIRREL1Q96J84 757 aa5.31□□□□□ -1.56
SPARCL1-208ENST00000535835 FAM8A1Q9UBU6 413 aa5.31□□□□□ -1.56
SPARCL1-208ENST00000535835 SNCAIPQ9Y6H5 919 aa5.31□□□□□ -1.56
SPARCL1-208ENST00000535835 CST3P01034 146 aaPredicted RBP5.3□□□□□ -1.56
SPARCL1-208ENST00000535835 CTSWP56202 376 aa5.3□□□□□ -1.56
SPARCL1-208ENST00000535835 PRAMEF13Q5VWM6 474 aa5.3□□□□□ -1.56
SPARCL1-208ENST00000535835 LETMD1Q6P1Q0 360 aa5.3□□□□□ -1.56
SPARCL1-208ENST00000535835 NPAS4Q8IUM7 802 aa5.3□□□□□ -1.56
SPARCL1-208ENST00000535835 HID1Q8IV36 788 aa5.3□□□□□ -1.56
SPARCL1-208ENST00000535835 MFSD2AQ8NA29 543 aa5.3□□□□□ -1.56
SPARCL1-208ENST00000535835 PCDHB5Q9Y5E4 795 aa5.3□□□□□ -1.56
SPARCL1-208ENST00000535835 FAM155AB1AL88 458 aaPredicted RBP5.29□□□□□ -1.56
SPARCL1-208ENST00000535835 GRK4P32298 578 aa5.29□□□□□ -1.56
SPARCL1-208ENST00000535835 RANGAP1P46060 587 aaPredicted RBP5.29□□□□□ -1.56
SPARCL1-208ENST00000535835 TNK2Q07912 1038 aa5.29□□□□□ -1.56
SPARCL1-208ENST00000535835 TTBK2Q6IQ55 1244 aa5.29□□□□□ -1.56
SPARCL1-208ENST00000535835 THAP5Q7Z6K1 395 aa5.29□□□□□ -1.56
SPARCL1-208ENST00000535835 KCNK12Q9HB15 430 aa5.29□□□□□ -1.56
SPARCL1-208ENST00000535835 RNF19AQ9NV58 838 aa5.29□□□□□ -1.56
SPARCL1-208ENST00000535835 TPX2Q9ULW0 747 aaKnown RBP5.29□□□□□ -1.56
SPARCL1-208ENST00000535835 SPG7Q9UQ90 795 aa5.29□□□□□ -1.56
SPARCL1-208ENST00000535835 WASH4PA8MWX3 477 aa5.28□□□□□ -1.56
SPARCL1-208ENST00000535835 ESR1P03372 595 aa5.28□□□□□ -1.56
SPARCL1-208ENST00000535835 C1QTNF9P0C862 333 aa5.28□□□□□ -1.56
SPARCL1-208ENST00000535835 ETF1P62495 437 aaKnown RBP5.28□□□□□ -1.56
SPARCL1-208ENST00000535835 SEPT6Q14141 434 aa5.28□□□□□ -1.56
SPARCL1-208ENST00000535835 TMEM67Q5HYA8 995 aa5.28□□□□□ -1.56
SPARCL1-208ENST00000535835 SYDE1Q6ZW31 735 aaPredicted RBP5.28□□□□□ -1.56
SPARCL1-208ENST00000535835 ZSCAN29Q8IWY8 852 aaPredicted RBP5.28□□□□□ -1.56
SPARCL1-208ENST00000535835 UBE2FQ969M7 185 aa5.28□□□□□ -1.56
SPARCL1-208ENST00000535835 SP110Q9HB58 689 aa5.28□□□□□ -1.56
SPARCL1-208ENST00000535835 TJP2Q9UDY2 1190 aa5.28□□□□□ -1.56
SPARCL1-208ENST00000535835 DNAJC25-GNG10A0A024R161 153 aa5.27□□□□□ -1.57
SPARCL1-208ENST00000535835 CBX7O95931 251 aa5.27□□□□□ -1.57
SPARCL1-208ENST00000535835 RPS26P62854 115 aaKnown RBP5.27□□□□□ -1.57
SPARCL1-208ENST00000535835 RALGPS1Q5JS13 557 aa5.27□□□□□ -1.57
SPARCL1-208ENST00000535835 CDH24Q86UP0 819 aa5.27□□□□□ -1.57
SPARCL1-208ENST00000535835 DNAJB8Q8NHS0 232 aa5.27□□□□□ -1.57
SPARCL1-208ENST00000535835 XAGE3Q8WTP9 111 aa5.27□□□□□ -1.57
SPARCL1-208ENST00000535835 Q96M66 194 aa5.27□□□□□ -1.57
SPARCL1-208ENST00000535835 ALPK1Q96QP1 1244 aa5.27□□□□□ -1.57
SPARCL1-208ENST00000535835 TTF2Q9UNY4 1162 aaKnown RBP5.27□□□□□ -1.57
SPARCL1-208ENST00000535835 TACC3Q9Y6A5 838 aa5.27□□□□□ -1.57
SPARCL1-208ENST00000535835 IVNS1ABPQ9Y6Y0 642 aa5.27□□□□□ -1.57
SPARCL1-208ENST00000535835 INHBBP09529 407 aa5.26□□□□□ -1.57
SPARCL1-208ENST00000535835 ERVFC1P60507 584 aa5.26□□□□□ -1.57
SPARCL1-208ENST00000535835 GAB4Q2WGN9 574 aa5.26□□□□□ -1.57
SPARCL1-208ENST00000535835 AGMOQ6ZNB7 445 aa5.26□□□□□ -1.57
SPARCL1-208ENST00000535835 AMIGO3Q86WK7 504 aa5.26□□□□□ -1.57
SPARCL1-208ENST00000535835 MRPL41Q8IXM3 137 aaKnown RBP5.26□□□□□ -1.57
SPARCL1-208ENST00000535835 PPP1R13LQ8WUF5 828 aa5.26□□□□□ -1.57
SPARCL1-208ENST00000535835 DPH2Q9BQC3 489 aaPredicted RBP5.26□□□□□ -1.57
SPARCL1-208ENST00000535835 DUSP15Q9H1R2 295 aaPredicted RBP5.26□□□□□ -1.57
SPARCL1-208ENST00000535835 ZSWIM5Q9P217 1185 aa5.26□□□□□ -1.57
SPARCL1-208ENST00000535835 LDHBP07195 334 aaKnown RBP5.25□□□□□ -1.57
SPARCL1-208ENST00000535835 GNA15P30679 374 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms