RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 AEBP2Q6ZN18 517 aaPredicted RBP21.7■■□□□ 1.06
SPARCL1-208ENST00000535835 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.85
SPARCL1-208ENST00000535835 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
SPARCL1-208ENST00000535835 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
SPARCL1-208ENST00000535835 FOXD1Q16676 465 aa17.43■□□□□ 0.38
SPARCL1-208ENST00000535835 POTEDQ86YR6 584 aa16.98■□□□□ 0.31
SPARCL1-208ENST00000535835 MSH5O43196 834 aa16.57■□□□□ 0.24
SPARCL1-208ENST00000535835 PIAS4Q8N2W9 510 aaPredicted RBP16.2■□□□□ 0.18
SPARCL1-208ENST00000535835 PLPPR3Q6T4P5 718 aa15.93■□□□□ 0.14
SPARCL1-208ENST00000535835 PPP6R1Q9UPN7 881 aa15.88■□□□□ 0.13
SPARCL1-208ENST00000535835 ADRA2BP18089 450 aa15.83■□□□□ 0.12
SPARCL1-208ENST00000535835 DMRT2Q9Y5R5 561 aa14.71□□□□□ -0.05
SPARCL1-208ENST00000535835 MAPK8IP2Q13387 824 aaPredicted RBP14.69□□□□□ -0.06
SPARCL1-208ENST00000535835 SCAF1Q9H7N4 1312 aaKnown RBP14.59□□□□□ -0.07
SPARCL1-208ENST00000535835 CACNB1Q02641 598 aaPredicted RBP14.54□□□□□ -0.08
SPARCL1-208ENST00000535835 DCAF8L1A6NGE4 600 aa14.21□□□□□ -0.13
SPARCL1-208ENST00000535835 RNF39Q9H2S5 420 aa14.04□□□□□ -0.16
SPARCL1-208ENST00000535835 PPP4R3CPQ6ZMV5 832 aa13.96□□□□□ -0.17
SPARCL1-208ENST00000535835 HOXD11P31277 338 aaPredicted RBP13.95□□□□□ -0.18
SPARCL1-208ENST00000535835 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
SPARCL1-208ENST00000535835 CNKSR2Q8WXI2 1034 aa13.75□□□□□ -0.21
SPARCL1-208ENST00000535835 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
SPARCL1-208ENST00000535835 DNAJC5BQ9UF47 199 aa13.6□□□□□ -0.23
SPARCL1-208ENST00000535835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.37□□□□□ -0.27
SPARCL1-208ENST00000535835 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
SPARCL1-208ENST00000535835 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
SPARCL1-208ENST00000535835 POTEHQ6S545 545 aa13.24□□□□□ -0.29
SPARCL1-208ENST00000535835 KCNA4P22459 653 aa13.08□□□□□ -0.32
SPARCL1-208ENST00000535835 CAPN15O75808 1086 aa12.99□□□□□ -0.33
SPARCL1-208ENST00000535835 DSG3P32926 999 aa12.99□□□□□ -0.33
SPARCL1-208ENST00000535835 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
SPARCL1-208ENST00000535835 SPINK5Q9NQ38 1064 aaPredicted RBP12.92□□□□□ -0.34
SPARCL1-208ENST00000535835 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
SPARCL1-208ENST00000535835 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
SPARCL1-208ENST00000535835 APLP2Q06481 763 aa12.66□□□□□ -0.38
SPARCL1-208ENST00000535835 ABCB7O75027 752 aa12.61□□□□□ -0.39
SPARCL1-208ENST00000535835 ZNF219Q9P2Y4 722 aaPredicted RBP12.61□□□□□ -0.39
SPARCL1-208ENST00000535835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
SPARCL1-208ENST00000535835 HNRNPUL2Q1KMD3 747 aaKnown RBP12.51□□□□□ -0.41
SPARCL1-208ENST00000535835 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.41
SPARCL1-208ENST00000535835 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
SPARCL1-208ENST00000535835 CHRDL2Q6WN34 429 aa12.35□□□□□ -0.43
SPARCL1-208ENST00000535835 SLC4A1APQ9BWU0 796 aaKnown RBP12.29□□□□□ -0.44
SPARCL1-208ENST00000535835 MYCNP04198 464 aaPredicted RBP12.22□□□□□ -0.45
SPARCL1-208ENST00000535835 POLA2Q14181 598 aa12.19□□□□□ -0.46
SPARCL1-208ENST00000535835 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
SPARCL1-208ENST00000535835 FOXD4L1Q9NU39 408 aa12.13□□□□□ -0.47
SPARCL1-208ENST00000535835 ZBTB22O15209 634 aa12.09□□□□□ -0.47
SPARCL1-208ENST00000535835 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
SPARCL1-208ENST00000535835 ATF5Q9Y2D1 282 aaPredicted RBP12.04□□□□□ -0.48
SPARCL1-208ENST00000535835 PIP4P2Q8N4L2 257 aa11.94□□□□□ -0.5
SPARCL1-208ENST00000535835 ZBTB12Q9Y330 459 aaPredicted RBP11.93□□□□□ -0.5
SPARCL1-208ENST00000535835 HAX1O00165 279 aa11.92□□□□□ -0.5
SPARCL1-208ENST00000535835 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
SPARCL1-208ENST00000535835 PITPNM1O00562 1244 aa11.78□□□□□ -0.52
SPARCL1-208ENST00000535835 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.52
SPARCL1-208ENST00000535835 OSCARQ8IYS5 282 aa11.78□□□□□ -0.52
SPARCL1-208ENST00000535835 ATXN8OSP0DMR3 200 aa11.76□□□□□ -0.53
SPARCL1-208ENST00000535835 EVX2Q03828 476 aa11.64□□□□□ -0.55
SPARCL1-208ENST00000535835 CSRNP3Q8WYN3 585 aa11.53□□□□□ -0.56
SPARCL1-208ENST00000535835 PRKAR2AP13861 404 aaKnown RBP11.5□□□□□ -0.57
SPARCL1-208ENST00000535835 SPDYE2BA6NHP3 402 aa11.49□□□□□ -0.57
SPARCL1-208ENST00000535835 SPDYE6P0CI01 402 aa11.49□□□□□ -0.57
SPARCL1-208ENST00000535835 MKRN4PQ13434 485 aaPredicted RBP11.49□□□□□ -0.57
SPARCL1-208ENST00000535835 SPDYE2Q495Y8 402 aa11.49□□□□□ -0.57
SPARCL1-208ENST00000535835 CLEC11AQ9Y240 323 aa11.46□□□□□ -0.57
SPARCL1-208ENST00000535835 SPDYE1Q8NFV5 336 aaPredicted RBP11.44□□□□□ -0.58
SPARCL1-208ENST00000535835 FBLN2P98095 1184 aa11.43□□□□□ -0.58
SPARCL1-208ENST00000535835 C19orf67A6NJJ6 358 aa11.42□□□□□ -0.58
SPARCL1-208ENST00000535835 LHX8Q68G74 356 aa11.42□□□□□ -0.58
SPARCL1-208ENST00000535835 GABBR2O75899 941 aa11.4□□□□□ -0.58
SPARCL1-208ENST00000535835 EHMT2Q96KQ7 1210 aa11.33□□□□□ -0.6
SPARCL1-208ENST00000535835 ZNF692Q9BU19 519 aaPredicted RBP11.3□□□□□ -0.6
SPARCL1-208ENST00000535835 SSUH2Q9Y2M2 353 aa11.3□□□□□ -0.6
SPARCL1-208ENST00000535835 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
SPARCL1-208ENST00000535835 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
SPARCL1-208ENST00000535835 PLSCR2Q9NRY7 297 aa11.15□□□□□ -0.62
SPARCL1-208ENST00000535835 CLCN6P51797 869 aa11.11□□□□□ -0.63
SPARCL1-208ENST00000535835 POTEIP0CG38 1075 aa11.1□□□□□ -0.63
SPARCL1-208ENST00000535835 CD44P16070 742 aaKnown RBP11.1□□□□□ -0.63
SPARCL1-208ENST00000535835 PABPN1Q86U42 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
SPARCL1-208ENST00000535835 DCBLD2Q96PD2 775 aa11.04□□□□□ -0.64
SPARCL1-208ENST00000535835 FARP1Q9Y4F1 1045 aaPredicted RBP11.04□□□□□ -0.64
SPARCL1-208ENST00000535835 ZRANB1Q9UGI0 708 aa10.89□□□□□ -0.67
SPARCL1-208ENST00000535835 ZNF579Q8NAF0 562 aaKnown RBP10.88□□□□□ -0.67
SPARCL1-208ENST00000535835 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
SPARCL1-208ENST00000535835 OTUD5Q96G74 571 aa10.82□□□□□ -0.68
SPARCL1-208ENST00000535835 POTEMA6NI47 508 aa10.78□□□□□ -0.68
SPARCL1-208ENST00000535835 GALR2O43603 387 aaPredicted RBP10.78□□□□□ -0.68
SPARCL1-208ENST00000535835 CREBZFQ9NS37 354 aa10.76□□□□□ -0.69
SPARCL1-208ENST00000535835 PAK3O75914 559 aaPredicted RBP10.74□□□□□ -0.69
SPARCL1-208ENST00000535835 POTEB2H3BUK9 544 aa10.73□□□□□ -0.69
SPARCL1-208ENST00000535835 POTEGQ6S5H5 508 aa10.73□□□□□ -0.69
SPARCL1-208ENST00000535835 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
SPARCL1-208ENST00000535835 PROM2Q8N271 834 aa10.72□□□□□ -0.69
SPARCL1-208ENST00000535835 PCDH10Q9P2E7 1040 aa10.68□□□□□ -0.7
SPARCL1-208ENST00000535835 PHF12Q96QT6 1004 aa10.64□□□□□ -0.71
SPARCL1-208ENST00000535835 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
SPARCL1-208ENST00000535835 NPM1P06748 294 aaKnown RBP eCLIP10.61□□□□□ -0.71
SPARCL1-208ENST00000535835 PELP1Q8IZL8 1130 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms