RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 KRT9P35527 623 aa19.68■□□□□ 0.74
PHRF1-205ENST00000533464 GTF2IP78347 998 aa19.68■□□□□ 0.74
PHRF1-205ENST00000533464 XPO4Q9C0E2 1151 aaKnown RBP19.68■□□□□ 0.74
PHRF1-205ENST00000533464 GJC1P36383 396 aa19.67■□□□□ 0.74
PHRF1-205ENST00000533464 REXO1Q8N1G1 1221 aaKnown RBP19.67■□□□□ 0.74
PHRF1-205ENST00000533464 FRMD4BQ9Y2L6 1034 aa19.67■□□□□ 0.74
PHRF1-205ENST00000533464 ZMYM6O95789 1325 aa19.67■□□□□ 0.74
PHRF1-205ENST00000533464 BTBD18B2RXH4 712 aa19.67■□□□□ 0.74
PHRF1-205ENST00000533464 HERC4Q5GLZ8 1057 aaPredicted RBP19.67■□□□□ 0.74
PHRF1-205ENST00000533464 CYP26C1Q6V0L0 522 aa19.67■□□□□ 0.74
PHRF1-205ENST00000533464 FAM212AQ96EL1 285 aa19.67■□□□□ 0.74
PHRF1-205ENST00000533464 RASAL2Q9UJF2 1139 aa19.67■□□□□ 0.74
PHRF1-205ENST00000533464 EPB41P11171 864 aaKnown RBP19.67■□□□□ 0.74
PHRF1-205ENST00000533464 ABCC3O15438 1527 aa19.67■□□□□ 0.74
PHRF1-205ENST00000533464 PPP2R3AQ06190 1150 aa19.67■□□□□ 0.74
PHRF1-205ENST00000533464 HECW2Q9P2P5 1572 aa19.67■□□□□ 0.74
PHRF1-205ENST00000533464 CETN3O15182 167 aa19.66■□□□□ 0.74
PHRF1-205ENST00000533464 ARHGAP6O43182 974 aa19.66■□□□□ 0.74
PHRF1-205ENST00000533464 ANTXR1Q9H6X2 564 aa19.66■□□□□ 0.74
PHRF1-205ENST00000533464 TTF2Q9UNY4 1162 aaKnown RBP19.66■□□□□ 0.74
PHRF1-205ENST00000533464 B4DLN1 442 aa19.66■□□□□ 0.74
PHRF1-205ENST00000533464 H0YIN7 160 aa19.66■□□□□ 0.74
PHRF1-205ENST00000533464 CALCRLQ16602 461 aa19.66■□□□□ 0.74
PHRF1-205ENST00000533464 FBXO18Q8NFZ0 1043 aa19.66■□□□□ 0.74
PHRF1-205ENST00000533464 PCDHA7Q9UN72 937 aa19.66■□□□□ 0.74
PHRF1-205ENST00000533464 NPHP4O75161 1426 aaPredicted RBP19.66■□□□□ 0.74
PHRF1-205ENST00000533464 OPA1O60313 960 aa19.66■□□□□ 0.74
PHRF1-205ENST00000533464 EEF2P13639 858 aaKnown RBP19.66■□□□□ 0.74
PHRF1-205ENST00000533464 MTX1Q13505 466 aa19.66■□□□□ 0.74
PHRF1-205ENST00000533464 CABP7Q86V35 215 aa19.66■□□□□ 0.74
PHRF1-205ENST00000533464 IFT81Q8WYA0 676 aa19.66■□□□□ 0.74
PHRF1-205ENST00000533464 ERCC3P19447 782 aa19.66■□□□□ 0.74
PHRF1-205ENST00000533464 VAV2P52735 878 aa19.66■□□□□ 0.74
PHRF1-205ENST00000533464 NCAPH2Q6IBW4 605 aa19.65■□□□□ 0.74
PHRF1-205ENST00000533464 TSGA10Q9BZW7 698 aa19.65■□□□□ 0.74
PHRF1-205ENST00000533464 TUBBP07437 444 aa19.65■□□□□ 0.74
PHRF1-205ENST00000533464 IL6STP40189 918 aaPredicted RBP19.65■□□□□ 0.74
PHRF1-205ENST00000533464 CRKLP46109 303 aaKnown RBP19.65■□□□□ 0.74
PHRF1-205ENST00000533464 NBPF14Q5TI25 921 aa19.65■□□□□ 0.74
PHRF1-205ENST00000533464 ZFP91Q96JP5 570 aaPredicted RBP19.65■□□□□ 0.74
PHRF1-205ENST00000533464 WDR17Q8IZU2 1322 aa19.65■□□□□ 0.74
PHRF1-205ENST00000533464 SMCO2A6NFE2 343 aa19.65■□□□□ 0.74
PHRF1-205ENST00000533464 MAPK8IP2Q13387 824 aaPredicted RBP19.65■□□□□ 0.74
PHRF1-205ENST00000533464 NELFBQ8WX92 580 aa19.65■□□□□ 0.74
PHRF1-205ENST00000533464 CMA1P23946 247 aa19.65■□□□□ 0.74
PHRF1-205ENST00000533464 PTPN12Q05209 780 aaKnown RBP19.65■□□□□ 0.74
PHRF1-205ENST00000533464 NAPGQ99747 312 aaPredicted RBP19.64■□□□□ 0.74
PHRF1-205ENST00000533464 USH1GQ495M9 461 aa19.64■□□□□ 0.73
PHRF1-205ENST00000533464 CCDC94Q9BW85 323 aaPredicted RBP19.64■□□□□ 0.73
PHRF1-205ENST00000533464 STK32BQ9NY57 414 aa19.64■□□□□ 0.73
PHRF1-205ENST00000533464 RAD51AP2Q09MP3 1159 aa19.64■□□□□ 0.73
PHRF1-205ENST00000533464 CUL4AQ13619 759 aa19.64■□□□□ 0.73
PHRF1-205ENST00000533464 LARGE2Q8N3Y3 721 aa19.64■□□□□ 0.73
PHRF1-205ENST00000533464 PNMA1Q8ND90 353 aa19.64■□□□□ 0.73
PHRF1-205ENST00000533464 IKBKGQ9Y6K9 419 aa19.64■□□□□ 0.73
PHRF1-205ENST00000533464 SHROOM2Q13796 1616 aa19.64■□□□□ 0.73
PHRF1-205ENST00000533464 TMTC1Q8IUR5 882 aa19.64■□□□□ 0.73
PHRF1-205ENST00000533464 CARD6Q9BX69 1037 aa19.64■□□□□ 0.73
PHRF1-205ENST00000533464 USP40Q9NVE5 1235 aa19.64■□□□□ 0.73
PHRF1-205ENST00000533464 SASH1O94885 1247 aa19.63■□□□□ 0.73
PHRF1-205ENST00000533464 NF2P35240 595 aa19.63■□□□□ 0.73
PHRF1-205ENST00000533464 USPL1Q5W0Q7 1092 aa19.63■□□□□ 0.73
PHRF1-205ENST00000533464 SPECC1LQ69YQ0 1117 aa19.63■□□□□ 0.73
PHRF1-205ENST00000533464 TBC1D7Q9P0N9 293 aa19.63■□□□□ 0.73
PHRF1-205ENST00000533464 GJA3Q9Y6H8 435 aa19.63■□□□□ 0.73
PHRF1-205ENST00000533464 PLCB3Q01970 1234 aa19.63■□□□□ 0.73
PHRF1-205ENST00000533464 POLA2Q14181 598 aa19.63■□□□□ 0.73
PHRF1-205ENST00000533464 BIN2Q9UBW5 565 aaPredicted RBP19.63■□□□□ 0.73
PHRF1-205ENST00000533464 TET3O43151 1660 aa19.63■□□□□ 0.73
PHRF1-205ENST00000533464 U2AF2P26368 475 aaKnown RBP eCLIP19.62■□□□□ 0.73
PHRF1-205ENST00000533464 BLIDQ8IZY5 108 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 PTCH1Q13635 1447 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 CAPN2P17655 700 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 PI16Q6UXB8 463 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 ATRIPQ8WXE1 791 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 CLIC6Q96NY7 704 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 FERMT1Q9BQL6 677 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 NUP58Q9BVL2 599 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 TNNC1P63316 161 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 DNM3Q9UQ16 869 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 ATP6V0A2Q9Y487 856 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 CLIC4Q9Y696 253 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 MED23Q9ULK4 1368 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 ERCC6L2Q5T890 1561 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 VPS18Q9P253 973 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 CLEC11AQ9Y240 323 aa19.62■□□□□ 0.73
PHRF1-205ENST00000533464 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.62■□□□□ 0.738e-6■■■□□ 18.5
PHRF1-205ENST00000533464 NDUFA8P51970 172 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 VWA3BQ502W6 1294 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 DPH6Q7L8W6 267 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 CCDC50Q8IVM0 306 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 CPXCR1Q8N123 301 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 HOMER2Q9NSB8 354 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 A0A1W2PRG0 241 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 ARHGEF35A5YM69 484 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 CCDC169A6NNP5 214 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 CFBP00751 764 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 GRIPAP1Q4V328 841 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 GPIHBP1Q8IV16 184 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 GSTA5Q7RTV2 222 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms