RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 USP44Q9H0E7 712 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 NKIRAS1Q9NYS0 192 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 PPP2R2CQ9Y2T4 447 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 NCKAP5LQ9HCH0 1330 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 ACTN4O43707 911 aaKnown RBP17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 CABS1Q96KC9 395 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 TSKSQ9UJT2 592 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 ATP2A2P16615 1042 aaKnown RBP17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 CUL4AQ13619 759 aa17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 NUCKS1Q9H1E3 243 aaKnown RBP17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 OSBPL3Q9H4L5 887 aa17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 FRMD4BQ9Y2L6 1034 aa17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 TTC37Q6PGP7 1564 aa17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 HIBADHP31937 336 aaKnown RBP17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 RBM6P78332 1123 aaKnown RBP17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 PIK3AP1Q6ZUJ8 805 aa17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 SAR1BQ9Y6B6 198 aa17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 V9GY48 417 aaPredicted RBP17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 CDC25BP30305 580 aa17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 NCBP1Q09161 790 aaKnown RBP17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 PNOCQ13519 176 aa17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 LETM2Q2VYF4 491 aa17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 PHKBQ93100 1093 aa17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 CSRNP2Q9H175 543 aa17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 DKC1O60832 514 aaKnown RBP eCLIP17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 SLC9C1Q4G0N8 1177 aa17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 SEL1L2Q5TEA6 688 aa17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 INTS8Q75QN2 995 aaKnown RBP17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 TRIM7Q9C029 511 aa17.21■□□□□ 0.35
PCDHA4-203ENST00000530339 ALDH3A1P30838 453 aa17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 APBB1IPQ7Z5R6 666 aaPredicted RBP17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 ERVV-2B6SEH9 535 aa17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 CALUO43852 315 aaPredicted RBP17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 PFKFB2O60825 505 aa17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 LONRF3Q496Y0 759 aa17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 MYO5CQ9NQX4 1742 aa17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 CFAP221Q4G0U5 840 aa17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 KIFAP3Q92845 792 aa17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 STAP2Q9UGK3 403 aa17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 MAGI2Q86UL8 1455 aa17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 CMA1P23946 247 aa17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 PPFIBP2Q8ND30 876 aa17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 ATP7BP35670 1465 aa17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 PLCB3Q01970 1234 aa17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 MCTP2Q6DN12 878 aa17.2■□□□□ 0.34
PCDHA4-203ENST00000530339 EEF2P13639 858 aaKnown RBP17.19■□□□□ 0.34
PCDHA4-203ENST00000530339 GRM1Q13255 1194 aa17.19■□□□□ 0.34
PCDHA4-203ENST00000530339 RABEP2Q9H5N1 569 aa17.19■□□□□ 0.34
PCDHA4-203ENST00000530339 UTP11Q9Y3A2 253 aaKnown RBP17.19■□□□□ 0.34
PCDHA4-203ENST00000530339 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.19■□□□□ 0.34
PCDHA4-203ENST00000530339 KDM5CP41229 1560 aa17.19■□□□□ 0.34
PCDHA4-203ENST00000530339 DCAF17Q5H9S7 520 aaPredicted RBP17.19■□□□□ 0.34
PCDHA4-203ENST00000530339 CCDC84Q86UT8 332 aaPredicted RBP17.19■□□□□ 0.34
PCDHA4-203ENST00000530339 TEX11Q8IYF3 940 aa17.19■□□□□ 0.34
PCDHA4-203ENST00000530339 ATP8B1O43520 1251 aa17.19■□□□□ 0.34
PCDHA4-203ENST00000530339 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
PCDHA4-203ENST00000530339 TMEM2Q9UHN6 1383 aa17.19■□□□□ 0.34
PCDHA4-203ENST00000530339 NDC80O14777 642 aa17.19■□□□□ 0.34
PCDHA4-203ENST00000530339 PABPN1LA6NDY0 278 aaKnown RBP17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 ATP11AP98196 1134 aa17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 NELFBQ8WX92 580 aa17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 SERTAD1Q9UHV2 236 aa17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 NSFL1CQ9UNZ2 370 aaKnown RBP17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 A0A0D9SFI3 127 aa17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 GOLGA5Q8TBA6 731 aa17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 SEC62Q99442 399 aaKnown RBP17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 MED4Q9NPJ6 270 aa17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 NDUFB9Q9Y6M9 179 aa17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 GJC1P36383 396 aa17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 RNASE9P60153 205 aaKnown RBP17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 OR8K1Q8NGG5 319 aa17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 HOOK2Q96ED9 719 aa17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 DESI2Q9BSY9 194 aa17.18■□□□□ 0.34
PCDHA4-203ENST00000530339 NONOQ15233 471 aaKnown RBP eCLIP17.17■□□□□ 0.34
PCDHA4-203ENST00000530339 TRIML1Q8N9V2 468 aa17.17■□□□□ 0.34
PCDHA4-203ENST00000530339 PCDHA7Q9UN72 937 aa17.17■□□□□ 0.34
PCDHA4-203ENST00000530339 EXOC7Q9UPT5 735 aa17.17■□□□□ 0.34
PCDHA4-203ENST00000530339 CETN3O15182 167 aa17.17■□□□□ 0.34
PCDHA4-203ENST00000530339 ASIC2Q16515 512 aa17.17■□□□□ 0.34
PCDHA4-203ENST00000530339 RABGGTAQ92696 567 aa17.17■□□□□ 0.34
PCDHA4-203ENST00000530339 FAM89AQ96GI7 184 aa17.17■□□□□ 0.34
PCDHA4-203ENST00000530339 LSG1Q9H089 658 aaKnown RBP17.17■□□□□ 0.34
PCDHA4-203ENST00000530339 NRBP1Q9UHY1 535 aa17.17■□□□□ 0.34
PCDHA4-203ENST00000530339 MYL10Q9BUA6 226 aa17.17■□□□□ 0.34
PCDHA4-203ENST00000530339 ARMT1Q9H993 441 aa17.17■□□□□ 0.34
PCDHA4-203ENST00000530339 PPFIA4O75335 1185 aa17.16■□□□□ 0.34
PCDHA4-203ENST00000530339 MTMR3Q13615 1198 aa17.16■□□□□ 0.34
PCDHA4-203ENST00000530339 NEURL1BA8MQ27 555 aa17.16■□□□□ 0.34
PCDHA4-203ENST00000530339 STX10O60499 249 aa17.16■□□□□ 0.34
PCDHA4-203ENST00000530339 CLNS1AP54105 237 aaKnown RBP17.16■□□□□ 0.34
PCDHA4-203ENST00000530339 TRAPPC3LQ5T215 181 aa17.16■□□□□ 0.34
PCDHA4-203ENST00000530339 BEGAINQ9BUH8 593 aa17.16■□□□□ 0.34
PCDHA4-203ENST00000530339 A0A1W2PQ27 194 aa17.16■□□□□ 0.34
PCDHA4-203ENST00000530339 A0A1W2PQ64 194 aa17.16■□□□□ 0.34
PCDHA4-203ENST00000530339 A0A1W2PQD8 194 aa17.16■□□□□ 0.34
PCDHA4-203ENST00000530339 VGLL3A8MV65 326 aa17.16■□□□□ 0.34
PCDHA4-203ENST00000530339 SPATA5Q8NB90 893 aa17.16■□□□□ 0.34
PCDHA4-203ENST00000530339 PLEKHF1Q96S99 279 aa17.16■□□□□ 0.34
PCDHA4-203ENST00000530339 KCNG1Q9UIX4 513 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms