RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 ZNF444Q8N0Y2 327 aaPredicted RBP7.36□□□□□ -1.23
MACF1-228ENST00000528611 CRACR2BQ8N4Y2 399 aaPredicted RBP7.36□□□□□ -1.23
MACF1-228ENST00000528611 NCOA7Q8NI08 942 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 ESR2Q92731 530 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 HHIPL1Q96JK4 782 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 TRIM34Q9BYJ4 488 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 ZNF341Q9BYN7 854 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 VEZTQ9HBM0 779 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 EPB41L4AQ9HCS5 686 aaPredicted RBP7.36□□□□□ -1.23
MACF1-228ENST00000528611 DDX4Q9NQI0 724 aaKnown RBP7.36□□□□□ -1.23
MACF1-228ENST00000528611 MYH1P12882 1939 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 PLIN4Q96Q06 1357 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 NAV1Q8NEY1 1877 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 CLRN2A0PK11 232 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 TCP10L2B9ZVM9 353 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 KIF3CO14782 793 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 SLC27A2O14975 620 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 SNPHO15079 494 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 PRKAB2O43741 272 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 MCM5P33992 734 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 IREB2P48200 963 aaKnown RBP7.35□□□□□ -1.23
MACF1-228ENST00000528611 NOVP48745 357 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 MCM2P49736 904 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 NUBP1P53384 320 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 PICALMQ13492 652 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 SART3Q15020 963 aaKnown RBP7.35□□□□□ -1.23
MACF1-228ENST00000528611 ANKRD1Q15327 319 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 NOL9Q5SY16 702 aaKnown RBP7.35□□□□□ -1.23
MACF1-228ENST00000528611 CCDC129Q6ZRS4 1044 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 ARMC9Q7Z3E5 817 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 RALYLQ86SE5 291 aaKnown RBP7.35□□□□□ -1.23
MACF1-228ENST00000528611 IQCA1Q86XH1 822 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 DGKHQ86XP1 1220 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 ANKS1AQ92625 1134 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 TMEM87BQ96K49 555 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 TBC1D32Q96NH3 1257 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 NEK1Q96PY6 1258 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 C22orf23Q9BZE7 217 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 IL25Q9H293 177 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 MKNK2Q9HBH9 465 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 CABP5Q9NP86 173 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 PALD1Q9ULE6 856 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.35□□□□□ -1.23
MACF1-228ENST00000528611 LAMA4Q16363 1823 aa7.35□□□□□ -1.23
MACF1-228ENST00000528611 LAMB1P07942 1786 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 SHTN1A0MZ66 631 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 DDTLA6NHG4 134 aaPredicted RBP7.34□□□□□ -1.23
MACF1-228ENST00000528611 MINDY4BA8MYZ0 360 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 E7EWF7 191 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 ITGBL1O95965 494 aaPredicted RBP7.34□□□□□ -1.23
MACF1-228ENST00000528611 CHGBP05060 677 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 CAP2P40123 477 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 LIFRP42702 1097 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 CDK8P49336 464 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 PLCD1P51178 756 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 TCP10Q12799 353 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 RABEP1Q15276 862 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 SLFNL1Q499Z3 407 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 CERKLQ49MI3 558 aaPredicted RBP7.34□□□□□ -1.23
MACF1-228ENST00000528611 EAPPQ56P03 285 aaPredicted RBP7.34□□□□□ -1.23
MACF1-228ENST00000528611 RCSD1Q6JBY9 416 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 TMEM179Q6ZVK1 233 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 DHX32Q7L7V1 743 aaKnown RBP7.34□□□□□ -1.23
MACF1-228ENST00000528611 SH3BP5LQ7L8J4 393 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 USP48Q86UV5 1035 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 ANKRD13AQ8IZ07 590 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 NEDD1Q8NHV4 660 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 MKL1Q969V6 931 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 KLRG1Q96E93 195 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 MAP3K14Q99558 947 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 TMEM106CQ9BVX2 250 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 AGXT2Q9BYV1 514 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 SH2D4AQ9H788 454 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 KANSL2Q9H9L4 492 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.34□□□□□ -1.233e-9■■■■■ 30.8
MACF1-228ENST00000528611 ZSWIM6Q9HCJ5 1215 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 NMRK2Q9NPI5 230 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 PCDHAC2Q9Y5I4 1007 aa7.34□□□□□ -1.23
MACF1-228ENST00000528611 PASKQ96RG2 1323 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 ERICH2A1L162 156 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 PHF20L1A8MW92 1017 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 SHMT1P34896 483 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 EVCP57679 992 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 MAP3K9P80192 1104 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 LDLRAD1Q5T700 205 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 BLOC1S2Q6QNY1 142 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 RUFY3Q7L099 469 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 SGMS1Q86VZ5 419 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 C2orf69Q8N8R5 385 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 ZNF784Q8NCA9 323 aaPredicted RBP7.33□□□□□ -1.24
MACF1-228ENST00000528611 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.33□□□□□ -1.24
MACF1-228ENST00000528611 CDCA5Q96FF9 252 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 TMEM39BQ9GZU3 492 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 AS3MTQ9HBK9 375 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 NYAP2Q9P242 653 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 SNX14Q9Y5W7 946 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 CYP46A1Q9Y6A2 500 aa7.33□□□□□ -1.24
MACF1-228ENST00000528611 POLR2AP24928 1970 aaKnown RBP7.33□□□□□ -1.24
MACF1-228ENST00000528611 TSPY2A6NKD2 308 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 C19orf81C9J6K1 198 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms