RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 CRACR2BQ8N4Y2 399 aaPredicted RBP13.48□□□□□ -0.25
CTSB-214ENST00000527243 SEC62Q99442 399 aaKnown RBP13.48□□□□□ -0.25
CTSB-214ENST00000527243 WDR18Q9BV38 432 aa13.48□□□□□ -0.25
CTSB-214ENST00000527243 TBC1D2Q9BYX2 928 aa13.48□□□□□ -0.25
CTSB-214ENST00000527243 EPB41L4AQ9HCS5 686 aaPredicted RBP13.48□□□□□ -0.25
CTSB-214ENST00000527243 SLC4A4Q9Y6R1 1079 aa13.48□□□□□ -0.25
CTSB-214ENST00000527243 PHIPQ8WWQ0 1821 aa13.48□□□□□ -0.25
CTSB-214ENST00000527243 NAV1Q8NEY1 1877 aa13.47□□□□□ -0.25
CTSB-214ENST00000527243 USP17L5A8MUK1 530 aa13.47□□□□□ -0.25
CTSB-214ENST00000527243 USP17L12C9JPN9 530 aa13.47□□□□□ -0.25
CTSB-214ENST00000527243 USP17L21D6R901 530 aa13.47□□□□□ -0.25
CTSB-214ENST00000527243 FOXP2O15409 715 aa13.47□□□□□ -0.25
CTSB-214ENST00000527243 POLR3DP05423 398 aaPredicted RBP13.47□□□□□ -0.25
CTSB-214ENST00000527243 ASNSP08243 561 aa13.47□□□□□ -0.25
CTSB-214ENST00000527243 SBK1Q52WX2 424 aa13.47□□□□□ -0.25
CTSB-214ENST00000527243 OTUD7BQ6GQQ9 843 aa13.47□□□□□ -0.25
CTSB-214ENST00000527243 CTR9Q6PD62 1173 aa13.47□□□□□ -0.25
CTSB-214ENST00000527243 ZNF296Q8WUU4 475 aaPredicted RBP13.47□□□□□ -0.25
CTSB-214ENST00000527243 ZBTB21Q9ULJ3 1066 aa13.47□□□□□ -0.25
CTSB-214ENST00000527243 ADGRA2Q96PE1 1338 aa13.46□□□□□ -0.25
CTSB-214ENST00000527243 CYP2D7A0A087X1C5 515 aa13.46□□□□□ -0.25
CTSB-214ENST00000527243 GDF11O95390 407 aa13.46□□□□□ -0.25
CTSB-214ENST00000527243 GUCY1A2P33402 732 aa13.46□□□□□ -0.25
CTSB-214ENST00000527243 SH3D19Q5HYK7 790 aa13.46□□□□□ -0.25
CTSB-214ENST00000527243 SLC44A5Q8NCS7 719 aa13.46□□□□□ -0.25
CTSB-214ENST00000527243 ZNF280CQ8ND82 737 aa13.46□□□□□ -0.25
CTSB-214ENST00000527243 CASP8AP2Q9UKL3 1982 aa13.45□□□□□ -0.26
CTSB-214ENST00000527243 GH2P01242 217 aa13.45□□□□□ -0.26
CTSB-214ENST00000527243 GNAT2P19087 354 aa13.45□□□□□ -0.26
CTSB-214ENST00000527243 SPP2Q13103 211 aa13.45□□□□□ -0.26
CTSB-214ENST00000527243 TAF1CQ15572 869 aaPredicted RBP13.45□□□□□ -0.26
CTSB-214ENST00000527243 C16orf86Q6ZW13 317 aa13.45□□□□□ -0.26
CTSB-214ENST00000527243 DYNLL2Q96FJ2 89 aa13.45□□□□□ -0.26
CTSB-214ENST00000527243 TRIM34Q9BYJ4 488 aa13.45□□□□□ -0.26
CTSB-214ENST00000527243 SWAP70Q9UH65 585 aa13.45□□□□□ -0.26
CTSB-214ENST00000527243 PTPRFP10586 1907 aa13.45□□□□□ -0.26
CTSB-214ENST00000527243 ROBO3Q96MS0 1386 aa13.45□□□□□ -0.26
CTSB-214ENST00000527243 A0A0D9SFI3 127 aa13.44□□□□□ -0.26
CTSB-214ENST00000527243 TRIM75PA6NK02 468 aa13.44□□□□□ -0.26
CTSB-214ENST00000527243 PATL2C9JE40 543 aaKnown RBP13.44□□□□□ -0.26
CTSB-214ENST00000527243 PDHXO00330 501 aa13.44□□□□□ -0.26
CTSB-214ENST00000527243 TLR2O60603 784 aa13.44□□□□□ -0.26
CTSB-214ENST00000527243 GSPT1P15170 499 aaKnown RBP13.44□□□□□ -0.26
CTSB-214ENST00000527243 CERKLQ49MI3 558 aaPredicted RBP13.44□□□□□ -0.26
CTSB-214ENST00000527243 FASTKD5Q7L8L6 764 aaKnown RBP13.44□□□□□ -0.26
CTSB-214ENST00000527243 FAM227BQ96M60 508 aa13.44□□□□□ -0.26
CTSB-214ENST00000527243 HELLSQ9NRZ9 838 aa13.44□□□□□ -0.26
CTSB-214ENST00000527243 ARPP21Q9UBL0 812 aaPredicted RBP13.44□□□□□ -0.26
CTSB-214ENST00000527243 SLC45A1Q9Y2W3 748 aa13.44□□□□□ -0.26
CTSB-214ENST00000527243 FKTNO75072 461 aa13.43□□□□□ -0.26
CTSB-214ENST00000527243 CDK8P49336 464 aa13.43□□□□□ -0.26
CTSB-214ENST00000527243 BACE1P56817 501 aa13.43□□□□□ -0.26
CTSB-214ENST00000527243 CAP1Q01518 475 aa13.43□□□□□ -0.26
CTSB-214ENST00000527243 ABCB5Q2M3G0 1257 aa13.43□□□□□ -0.26
CTSB-214ENST00000527243 CCDC129Q6ZRS4 1044 aa13.43□□□□□ -0.26
CTSB-214ENST00000527243 IFNL3Q8IZI9 196 aa13.43□□□□□ -0.26
CTSB-214ENST00000527243 TNS4Q8IZW8 715 aa13.43□□□□□ -0.26
CTSB-214ENST00000527243 PROCA1Q8NCQ7 364 aaPredicted RBP13.43□□□□□ -0.26
CTSB-214ENST00000527243 DDRGK1Q96HY6 314 aa13.43□□□□□ -0.26
CTSB-214ENST00000527243 AS3MTQ9HBK9 375 aa13.43□□□□□ -0.26
CTSB-214ENST00000527243 ZFYVE28Q9HCC9 887 aa13.43□□□□□ -0.26
CTSB-214ENST00000527243 AGTPBP1Q9UPW5 1226 aa13.43□□□□□ -0.26
CTSB-214ENST00000527243 BAZ2AQ9UIF9 1905 aaKnown RBP13.43□□□□□ -0.26
CTSB-214ENST00000527243 ATAD5Q96QE3 1844 aa13.42□□□□□ -0.26
CTSB-214ENST00000527243 TRIM6-TRIM34B2RNG4 842 aa13.42□□□□□ -0.26
CTSB-214ENST00000527243 SDSP20132 328 aa13.42□□□□□ -0.26
CTSB-214ENST00000527243 HMGCS2P54868 508 aa13.42□□□□□ -0.26
CTSB-214ENST00000527243 NMIQ13287 307 aaPredicted RBP13.42□□□□□ -0.26
CTSB-214ENST00000527243 TREML2Q5T2D2 321 aa13.42□□□□□ -0.26
CTSB-214ENST00000527243 TTC22Q5TAA0 569 aa13.42□□□□□ -0.26
CTSB-214ENST00000527243 C17orf99Q6UX52 265 aa13.42□□□□□ -0.26
CTSB-214ENST00000527243 CCDC17Q96LX7 622 aa13.42□□□□□ -0.26
CTSB-214ENST00000527243 LOC285556D6RIA3 1793 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 C19orf81C9J6K1 198 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 USP17L10C9JJH3 530 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 AKR1B1P15121 316 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 DGKZQ13574 1117 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 MTMR2Q13614 643 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 SEPT2Q15019 361 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 ALX1Q15699 326 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 MCMDC2Q4G0Z9 681 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 VPS53Q5VIR6 699 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 GADL1Q6ZQY3 521 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 CTU1Q7Z7A3 348 aaKnown RBP13.41□□□□□ -0.26
CTSB-214ENST00000527243 ZNF589Q86UQ0 364 aaPredicted RBP13.41□□□□□ -0.26
CTSB-214ENST00000527243 SIAH1Q8IUQ4 282 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 ACER1Q8TDN7 264 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 RILPL2Q969X0 211 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 C12orf42Q96LP6 360 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.41□□□□□ -0.26
CTSB-214ENST00000527243 KIAA1683Q9H0B3 1180 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 EMILIN3Q9NT22 766 aa13.41□□□□□ -0.26
CTSB-214ENST00000527243 CYP2C8P10632 490 aa13.4□□□□□ -0.26
CTSB-214ENST00000527243 BCRP11274 1271 aa13.4□□□□□ -0.26
CTSB-214ENST00000527243 RASA1P20936 1047 aa13.4□□□□□ -0.26
CTSB-214ENST00000527243 HOXA7P31268 230 aaPredicted RBP13.4□□□□□ -0.26
CTSB-214ENST00000527243 TDO2P48775 406 aa13.4□□□□□ -0.26
CTSB-214ENST00000527243 SP3Q02447 781 aa13.4□□□□□ -0.26
CTSB-214ENST00000527243 TMEM179Q6ZVK1 233 aa13.4□□□□□ -0.26
CTSB-214ENST00000527243 CENPQQ7L2Z9 268 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms