RNA–Protein interactions for RNA: ENST00000518080.2

HMBOX1-205, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-205ENST00000518080 SCRN1Q12765 414 aa11.75□□□□□ -0.53
HMBOX1-205ENST00000518080 DLGAP5Q15398 846 aa11.75□□□□□ -0.53
HMBOX1-205ENST00000518080 IFIT1BQ5T764 474 aaKnown RBP11.75□□□□□ -0.53
HMBOX1-205ENST00000518080 ASTLQ6HA08 431 aaPredicted RBP11.75□□□□□ -0.53
HMBOX1-205ENST00000518080 APOA5Q6Q788 366 aa11.75□□□□□ -0.53
HMBOX1-205ENST00000518080 RAB11FIP4Q86YS3 637 aa11.75□□□□□ -0.53
HMBOX1-205ENST00000518080 ZSCAN10Q96SZ4 725 aaPredicted RBP11.75□□□□□ -0.53
HMBOX1-205ENST00000518080 LLPHQ9BRT6 129 aaKnown RBP11.75□□□□□ -0.53
HMBOX1-205ENST00000518080 MRIQ9BWK5 157 aa11.75□□□□□ -0.53
HMBOX1-205ENST00000518080 OSBPL5Q9H0X9 879 aaPredicted RBP11.75□□□□□ -0.53
HMBOX1-205ENST00000518080 LY9Q9HBG7 655 aa11.75□□□□□ -0.53
HMBOX1-205ENST00000518080 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
HMBOX1-205ENST00000518080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.75□□□□□ -0.53
HMBOX1-205ENST00000518080 PTPDC1A2A3K4 754 aa11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 WDHD1O75717 1129 aaPredicted RBP11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 ST3GAL1Q11201 340 aa11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 CCDC178Q5BJE1 867 aa11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 FAM47AQ5JRC9 791 aa11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 FOXD4L5Q5VV16 416 aaPredicted RBP11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 APOBEC3HQ6NTF7 200 aaKnown RBP11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 ARHGAP27Q6ZUM4 889 aa11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 ILDR2Q71H61 639 aa11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 CATIPQ7Z7H3 387 aa11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 ZNF444Q8N0Y2 327 aaPredicted RBP11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 CRACR2BQ8N4Y2 399 aaPredicted RBP11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 FOXD4L4Q8WXT5 416 aaPredicted RBP11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 DYNLL2Q96FJ2 89 aa11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 NCOA5Q9HCD5 579 aaKnown RBP11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 MKRN1Q9UHC7 482 aaKnown RBP11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 BRPF3Q9ULD4 1205 aa11.74□□□□□ -0.53
HMBOX1-205ENST00000518080 DDX11L8A8MPP1 907 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 H3BQV1 296 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 SMIM22K7EJ46 135 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 STX6O43752 255 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 CALM1P0DP23 149 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 CALM2P0DP24 149 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 CALM3P0DP25 149 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 PDIA4P13667 645 aaKnown RBP11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 RPS12P25398 132 aaKnown RBP11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 EVCP57679 992 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 CXCL9Q07325 125 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 TCP10Q12799 353 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 NFKBIBQ15653 356 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 RTN1Q16799 776 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 IFFO2Q5TF58 517 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 C16orf86Q6ZW13 317 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 SGMS1Q86VZ5 419 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 NUP133Q8WUM0 1156 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 SLC39A7Q92504 469 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 TNPO1Q92973 898 aaKnown RBP11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 DDX11Q96FC9 970 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 SWAP70Q9UH65 585 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 METRNQ9UJH8 293 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 ATP6V1DQ9Y5K8 247 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 TACC3Q9Y6A5 838 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 GJA3Q9Y6H8 435 aa11.73□□□□□ -0.53
HMBOX1-205ENST00000518080 TCHHQ07283 1943 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 COL2A1P02458 1487 aaPredicted RBP11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 CCDC196A0A1B0GTZ2 297 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 JAK2O60674 1132 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 FGRP09769 529 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 RXRAP19793 462 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 PLCD1P51178 756 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 CACNB3P54284 484 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 TFAP4Q01664 338 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 LARP1BQ659C4 914 aaKnown RBP11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 MAMSTRQ6ZN01 415 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 CCDC144CPQ8IYA2 1237 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 ZNF654Q8IZM8 581 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 ENAHQ8N8S7 591 aaPredicted RBP11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 SLC44A5Q8NCS7 719 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 NSUN7Q8NE18 718 aaKnown RBP11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 IGDCC4Q8TDY8 1250 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 MYL10Q9BUA6 226 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 DHX36Q9H2U1 1008 aaKnown RBP11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 TDRD3Q9H7E2 651 aaKnown RBP11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 KAT14Q9H8E8 782 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 VEZTQ9HBM0 779 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 DDX4Q9NQI0 724 aaKnown RBP11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 SERPINB13Q9UIV8 391 aa11.72□□□□□ -0.53
HMBOX1-205ENST00000518080 NID2Q14112 1375 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 GREB1LQ9C091 1923 aaPredicted RBP11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 CLRN2A0PK11 232 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 DDAH1O94760 285 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 ZSCAN22P10073 491 aaPredicted RBP11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 LMNB1P20700 586 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 PTMSP20962 102 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 SYT1P21579 422 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 CDK8P49336 464 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 MMP14P50281 582 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 FOSBP53539 338 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 RCAN1P53805 252 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 NFIAQ12857 509 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 PKP1Q13835 747 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 TRIM22Q8IYM9 498 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 CTCFLQ8NI51 663 aaPredicted RBP11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 GMLQ99445 158 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 IDI2Q9BXS1 227 aa11.71□□□□□ -0.53
HMBOX1-205ENST00000518080 PCDHAC2Q9Y5I4 1007 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms