RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 CRACR2BQ8N4Y2 399 aaPredicted RBP21.89■■□□□ 1.09
CLDND1-220ENST00000508902 ZBTB21Q9ULJ3 1066 aa21.89■■□□□ 1.09
CLDND1-220ENST00000508902 SLC4A4Q9Y6R1 1079 aa21.89■■□□□ 1.09
CLDND1-220ENST00000508902 GREB1LQ9C091 1923 aaPredicted RBP21.88■■□□□ 1.09
CLDND1-220ENST00000508902 TRIM75PA6NK02 468 aa21.88■■□□□ 1.09
CLDND1-220ENST00000508902 ALDH1A1P00352 501 aa21.88■■□□□ 1.09
CLDND1-220ENST00000508902 ZFYP08048 801 aaPredicted RBP21.88■■□□□ 1.09
CLDND1-220ENST00000508902 GUCY1A2P33402 732 aa21.88■■□□□ 1.09
CLDND1-220ENST00000508902 NOM1Q5C9Z4 860 aaKnown RBP21.88■■□□□ 1.09
CLDND1-220ENST00000508902 CCDC129Q6ZRS4 1044 aa21.88■■□□□ 1.09
CLDND1-220ENST00000508902 TNS4Q8IZW8 715 aa21.88■■□□□ 1.09
CLDND1-220ENST00000508902 ATP8A2Q9NTI2 1148 aa21.88■■□□□ 1.09
CLDND1-220ENST00000508902 C12orf60Q5U649 245 aa21.87■■□□□ 1.09
CLDND1-220ENST00000508902 CTR9Q6PD62 1173 aa21.87■■□□□ 1.09
CLDND1-220ENST00000508902 TTC6Q86TZ1 520 aa21.87■■□□□ 1.09
CLDND1-220ENST00000508902 ZBTB47Q9UFB7 747 aaPredicted RBP21.87■■□□□ 1.09
CLDND1-220ENST00000508902 USP17L12C9JPN9 530 aa21.86■■□□□ 1.09
CLDND1-220ENST00000508902 USP17L21D6R901 530 aa21.86■■□□□ 1.09
CLDND1-220ENST00000508902 GH2P01242 217 aa21.86■■□□□ 1.09
CLDND1-220ENST00000508902 POLR3DP05423 398 aaPredicted RBP21.86■■□□□ 1.09
CLDND1-220ENST00000508902 TAF1CQ15572 869 aaPredicted RBP21.86■■□□□ 1.09
CLDND1-220ENST00000508902 ANKRD23Q86SG2 305 aa21.86■■□□□ 1.09
CLDND1-220ENST00000508902 EVI5LQ96CN4 794 aa21.86■■□□□ 1.09
CLDND1-220ENST00000508902 A0A0D9SFI3 127 aa21.85■■□□□ 1.09
CLDND1-220ENST00000508902 USP17L5A8MUK1 530 aa21.85■■□□□ 1.09
CLDND1-220ENST00000508902 SPP2Q13103 211 aa21.85■■□□□ 1.09
CLDND1-220ENST00000508902 TREML2Q5T2D2 321 aa21.85■■□□□ 1.09
CLDND1-220ENST00000508902 FAM227BQ96M60 508 aa21.85■■□□□ 1.09
CLDND1-220ENST00000508902 PDHXO00330 501 aa21.84■■□□□ 1.09
CLDND1-220ENST00000508902 GSPT1P15170 499 aaKnown RBP21.84■■□□□ 1.09
CLDND1-220ENST00000508902 ZNF280CQ8ND82 737 aa21.84■■□□□ 1.09
CLDND1-220ENST00000508902 WDR18Q9BV38 432 aa21.84■■□□□ 1.09
CLDND1-220ENST00000508902 ASNSP08243 561 aa21.83■■□□□ 1.09
CLDND1-220ENST00000508902 HMGCS2P54868 508 aa21.83■■□□□ 1.09
CLDND1-220ENST00000508902 GADL1Q6ZQY3 521 aa21.83■■□□□ 1.09
CLDND1-220ENST00000508902 SKAP1Q86WV1 359 aa21.83■■□□□ 1.09
CLDND1-220ENST00000508902 TRIM34Q9BYJ4 488 aa21.83■■□□□ 1.09
CLDND1-220ENST00000508902 MCOLN1Q9GZU1 580 aa21.83■■□□□ 1.09
CLDND1-220ENST00000508902 ZCCHC17Q9NP64 241 aaKnown RBP21.83■■□□□ 1.09
CLDND1-220ENST00000508902 ROBO3Q96MS0 1386 aa21.83■■□□□ 1.08
CLDND1-220ENST00000508902 CENPFP49454 3210 aa21.83■■□□□ 1.08
CLDND1-220ENST00000508902 FKTNO75072 461 aa21.82■■□□□ 1.08
CLDND1-220ENST00000508902 CYP2C8P10632 490 aa21.82■■□□□ 1.08
CLDND1-220ENST00000508902 MTMR2Q13614 643 aa21.82■■□□□ 1.08
CLDND1-220ENST00000508902 CERKLQ49MI3 558 aaPredicted RBP21.82■■□□□ 1.08
CLDND1-220ENST00000508902 SH3D19Q5HYK7 790 aa21.82■■□□□ 1.08
CLDND1-220ENST00000508902 VPS53Q5VIR6 699 aa21.82■■□□□ 1.08
CLDND1-220ENST00000508902 OTUD7BQ6GQQ9 843 aa21.82■■□□□ 1.08
CLDND1-220ENST00000508902 ZNF589Q86UQ0 364 aaPredicted RBP21.82■■□□□ 1.08
CLDND1-220ENST00000508902 CLEC10AQ8IUN9 316 aa21.82■■□□□ 1.08
CLDND1-220ENST00000508902 TLR2O60603 784 aa21.81■■□□□ 1.08
CLDND1-220ENST00000508902 AKR1B1P15121 316 aa21.81■■□□□ 1.08
CLDND1-220ENST00000508902 CTGFP29279 349 aa21.81■■□□□ 1.08
CLDND1-220ENST00000508902 NMIQ13287 307 aaPredicted RBP21.81■■□□□ 1.08
CLDND1-220ENST00000508902 SBK1Q52WX2 424 aa21.81■■□□□ 1.08
CLDND1-220ENST00000508902 C16orf86Q6ZW13 317 aa21.81■■□□□ 1.08
CLDND1-220ENST00000508902 CD99L2Q8TCZ2 262 aa21.81■■□□□ 1.08
CLDND1-220ENST00000508902 ACER1Q8TDN7 264 aa21.81■■□□□ 1.08
CLDND1-220ENST00000508902 TACC3Q9Y6A5 838 aa21.81■■□□□ 1.08
CLDND1-220ENST00000508902 MGAMO43451 1857 aa21.8■■□□□ 1.08
CLDND1-220ENST00000508902 CDK8P49336 464 aa21.8■■□□□ 1.08
CLDND1-220ENST00000508902 SEPT2Q15019 361 aa21.8■■□□□ 1.08
CLDND1-220ENST00000508902 ABCB5Q2M3G0 1257 aa21.8■■□□□ 1.08
CLDND1-220ENST00000508902 GIMAP6Q6P9H5 292 aa21.8■■□□□ 1.08
CLDND1-220ENST00000508902 C17orf99Q6UX52 265 aa21.8■■□□□ 1.08
CLDND1-220ENST00000508902 IFNL3Q8IZI9 196 aa21.8■■□□□ 1.08
CLDND1-220ENST00000508902 ZFYVE28Q9HCC9 887 aa21.8■■□□□ 1.08
CLDND1-220ENST00000508902 GINM1Q9NU53 330 aa21.8■■□□□ 1.08
CLDND1-220ENST00000508902 AGTPBP1Q9UPW5 1226 aa21.8■■□□□ 1.08
CLDND1-220ENST00000508902 TRIM6-TRIM34B2RNG4 842 aa21.79■■□□□ 1.08
CLDND1-220ENST00000508902 BACE1P56817 501 aa21.79■■□□□ 1.08
CLDND1-220ENST00000508902 CTU1Q7Z7A3 348 aaKnown RBP21.79■■□□□ 1.08
CLDND1-220ENST00000508902 SIAH1Q8IUQ4 282 aa21.79■■□□□ 1.08
CLDND1-220ENST00000508902 RILPL2Q969X0 211 aa21.79■■□□□ 1.08
CLDND1-220ENST00000508902 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.79■■□□□ 1.08
CLDND1-220ENST00000508902 ARHGAP39Q9C0H5 1083 aa21.79■■□□□ 1.08
CLDND1-220ENST00000508902 IL25Q9H293 177 aa21.79■■□□□ 1.08
CLDND1-220ENST00000508902 EMILIN3Q9NT22 766 aa21.79■■□□□ 1.08
CLDND1-220ENST00000508902 ARPP21Q9UBL0 812 aaPredicted RBP21.79■■□□□ 1.08
CLDND1-220ENST00000508902 CPA4Q9UI42 421 aa21.79■■□□□ 1.08
CLDND1-220ENST00000508902 RLFQ13129 1914 aa21.78■■□□□ 1.08
CLDND1-220ENST00000508902 A0A1W2PRG0 241 aa21.78■■□□□ 1.08
CLDND1-220ENST00000508902 PATL2C9JE40 543 aaKnown RBP21.78■■□□□ 1.08
CLDND1-220ENST00000508902 FASTKD5Q7L8L6 764 aaKnown RBP21.78■■□□□ 1.08
CLDND1-220ENST00000508902 PROCA1Q8NCQ7 364 aaPredicted RBP21.78■■□□□ 1.08
CLDND1-220ENST00000508902 TBC1D2Q9BYX2 928 aa21.78■■□□□ 1.08
CLDND1-220ENST00000508902 BCRP11274 1271 aa21.77■■□□□ 1.08
CLDND1-220ENST00000508902 GNAT2P19087 354 aa21.77■■□□□ 1.08
CLDND1-220ENST00000508902 SDSP20132 328 aa21.77■■□□□ 1.08
CLDND1-220ENST00000508902 RAB3GAP1Q15042 981 aa21.77■■□□□ 1.08
CLDND1-220ENST00000508902 LRRFIP1Q32MZ4 808 aaKnown RBP21.77■■□□□ 1.08
CLDND1-220ENST00000508902 TTC22Q5TAA0 569 aa21.77■■□□□ 1.08
CLDND1-220ENST00000508902 POTEEQ6S8J3 1075 aa21.77■■□□□ 1.08
CLDND1-220ENST00000508902 STK11IPQ8N1F8 1099 aa21.77■■□□□ 1.08
CLDND1-220ENST00000508902 ABHD8Q96I13 439 aa21.77■■□□□ 1.08
CLDND1-220ENST00000508902 SWAP70Q9UH65 585 aa21.77■■□□□ 1.08
CLDND1-220ENST00000508902 SLC45A1Q9Y2W3 748 aa21.77■■□□□ 1.08
CLDND1-220ENST00000508902 PARP14Q460N5 1801 aa21.77■■□□□ 1.08
CLDND1-220ENST00000508902 DOCK3Q8IZD9 2030 aa21.77■■□□□ 1.07
CLDND1-220ENST00000508902 SP3Q02447 781 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms