RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 SENP2Q9HC62 589 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 TOMM22Q9NS69 142 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 FAM217BQ9NTX9 383 aaPredicted RBP13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 PCDHA7Q9UN72 937 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 UQCRHLA0A096LP55 91 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 USP17L12C9JPN9 530 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 USP17L21D6R901 530 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 SPTLC2O15270 562 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 BAG3O95817 575 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 UQCRHP07919 91 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 IFNAR1P17181 557 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 CHRNA5P30532 468 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 KIF23Q02241 960 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 TRIM29Q14134 588 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 RRP12Q5JTH9 1297 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 SARM1Q6SZW1 724 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 C2CD5Q86YS7 1000 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 TBC1D22AQ8WUA7 517 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 PRIMPOLQ96LW4 560 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 ALG1Q9BT22 464 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 MKRN1Q9UHC7 482 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 BECN2A8MW95 431 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 H0YIN7 160 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 IARSP41252 1262 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 GNL2Q13823 731 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 JMYQ8N9B5 988 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 WASF1Q92558 559 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 POLLQ9UGP5 575 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 FAM205AQ6ZU69 1335 aa13.36□□□□□ -0.27
PRPF40B-203ENST00000508736 MROH7-TTC4A0A0A0MT08 1334 aa13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 TNKSO95271 1327 aa13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 DYNC1I1O14576 645 aa13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 FMNL1O95466 1100 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 POLR3DP05423 398 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 ANO1Q5XXA6 986 aa13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 OTUD7BQ6GQQ9 843 aa13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 SLC51AQ86UW1 340 aa13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 IQCA1Q86XH1 822 aa13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 RAB11FIP4Q86YS3 637 aa13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 SLF2Q8IX21 1173 aa13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 FMR1NBQ8N0W7 255 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 KIAA1524Q8TCG1 905 aa13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 ZNF622Q969S3 477 aaKnown RBP eCLIP13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 ZSCAN10Q96SZ4 725 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 SDF4Q9BRK5 362 aa13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 SUGT1Q9Y2Z0 365 aa13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 BAZ2AQ9UIF9 1905 aaKnown RBP13.35□□□□□ -0.27
PRPF40B-203ENST00000508736 DLEC1Q9Y238 1755 aa13.34□□□□□ -0.27
PRPF40B-203ENST00000508736 ROBO3Q96MS0 1386 aa13.34□□□□□ -0.27
PRPF40B-203ENST00000508736 HSP90AA2PQ14568 343 aaPredicted RBP13.34□□□□□ -0.27
PRPF40B-203ENST00000508736 IQCB1Q15051 598 aa13.34□□□□□ -0.27
PRPF40B-203ENST00000508736 RTN1Q16799 776 aa13.34□□□□□ -0.27
PRPF40B-203ENST00000508736 ZNF654Q8IZM8 581 aa13.34□□□□□ -0.27
PRPF40B-203ENST00000508736 NOL10Q9BSC4 688 aaKnown RBP13.34□□□□□ -0.27
PRPF40B-203ENST00000508736 COA1Q9GZY4 146 aa13.34□□□□□ -0.27
PRPF40B-203ENST00000508736 KCNF1Q9H3M0 494 aa13.34□□□□□ -0.27
PRPF40B-203ENST00000508736 CLIC4Q9Y696 253 aa13.34□□□□□ -0.27
PRPF40B-203ENST00000508736 C10orf71Q711Q0 1435 aa13.34□□□□□ -0.27
PRPF40B-203ENST00000508736 RANBP6O60518 1105 aaKnown RBP13.33□□□□□ -0.27
PRPF40B-203ENST00000508736 PDE4BQ07343 736 aa13.33□□□□□ -0.27
PRPF40B-203ENST00000508736 FANCBQ8NB91 859 aa13.33□□□□□ -0.27
PRPF40B-203ENST00000508736 MASTLQ96GX5 879 aa13.33□□□□□ -0.27
PRPF40B-203ENST00000508736 MRFAP1L1Q96HT8 127 aa13.33□□□□□ -0.27
PRPF40B-203ENST00000508736 CYP2D7A0A087X1C5 515 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 GPR75-ASB3A0A0A6YYF3 556 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 CALM1P0DP23 149 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 CALM2P0DP24 149 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 CALM3P0DP25 149 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 DPEP1P16444 411 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 PLCG2P16885 1265 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 RXRAP19793 462 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 PTGS1P23219 599 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 SSRP1Q08945 709 aaKnown RBP13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 C12orf60Q5U649 245 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 C11orf57Q6ZUT1 292 aaPredicted RBP13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 ENAHQ8N8S7 591 aaPredicted RBP13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 GPR101Q96P66 508 aaPredicted RBP13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 ZKSCAN3Q9BRR0 538 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 RTFDC1Q9BY42 306 aaPredicted RBP13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 CLIP2Q9UDT6 1046 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 JAG2Q9Y219 1238 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 CD2APQ9Y5K6 639 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 MYH6P13533 1939 aa13.33□□□□□ -0.28
PRPF40B-203ENST00000508736 GAKO14976 1311 aa13.32□□□□□ -0.28
PRPF40B-203ENST00000508736 A0A1B0GVL5 298 aa13.32□□□□□ -0.28
PRPF40B-203ENST00000508736 KIF28PB7ZC32 967 aa13.32□□□□□ -0.28
PRPF40B-203ENST00000508736 C6orf229H3BNL8 230 aa13.32□□□□□ -0.28
PRPF40B-203ENST00000508736 DDAH1O94760 285 aa13.32□□□□□ -0.28
PRPF40B-203ENST00000508736 CMA1P23946 247 aa13.32□□□□□ -0.28
PRPF40B-203ENST00000508736 NDUFA8P51970 172 aa13.32□□□□□ -0.28
PRPF40B-203ENST00000508736 TGFB2P61812 414 aa13.32□□□□□ -0.28
PRPF40B-203ENST00000508736 KRT40Q6A162 431 aa13.32□□□□□ -0.28
PRPF40B-203ENST00000508736 AMOTL1Q8IY63 956 aa13.32□□□□□ -0.28
PRPF40B-203ENST00000508736 TRIM22Q8IYM9 498 aa13.32□□□□□ -0.28
PRPF40B-203ENST00000508736 MYL10Q9BUA6 226 aa13.32□□□□□ -0.28
PRPF40B-203ENST00000508736 MCM9Q9NXL9 1143 aa13.32□□□□□ -0.28
PRPF40B-203ENST00000508736 COL11A2P13942 1736 aaPredicted RBP13.32□□□□□ -0.28
PRPF40B-203ENST00000508736 NEMFO60524 1076 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms