RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 NLRP3Q96P20 1036 aa19.02■□□□□ 0.63
VCAN-204ENST00000502527 ANKRD2Q9GZV1 360 aa19.02■□□□□ 0.63
VCAN-204ENST00000502527 PCDHB6Q9Y5E3 794 aa19.02■□□□□ 0.63
VCAN-204ENST00000502527 SRPRBQ9Y5M8 271 aaKnown RBP19.02■□□□□ 0.63
VCAN-204ENST00000502527 PRPF3O43395 683 aaKnown RBP19.01■□□□□ 0.63
VCAN-204ENST00000502527 SFPQP23246 707 aaKnown RBP eCLIP19.01■□□□□ 0.63
VCAN-204ENST00000502527 CACNA1SQ13698 1873 aa19.01■□□□□ 0.63
VCAN-204ENST00000502527 PTPN14Q15678 1187 aa19.01■□□□□ 0.63
VCAN-204ENST00000502527 CTR9Q6PD62 1173 aa19.01■□□□□ 0.63
VCAN-204ENST00000502527 NYAP1Q6ZVC0 841 aa19.01■□□□□ 0.63
VCAN-204ENST00000502527 FOXP4Q8IVH2 680 aaPredicted RBP19.01■□□□□ 0.63
VCAN-204ENST00000502527 CCAR2Q8N163 923 aaKnown RBP19.01■□□□□ 0.63
VCAN-204ENST00000502527 HSD3B7Q9H2F3 369 aa19.01■□□□□ 0.63
VCAN-204ENST00000502527 MORC2Q9Y6X9 1032 aaPredicted RBP19.01■□□□□ 0.63
VCAN-204ENST00000502527 CYP2D7A0A087X1C5 515 aa19.01■□□□□ 0.63
VCAN-204ENST00000502527 USP27XA6NNY8 438 aa19.01■□□□□ 0.63
VCAN-204ENST00000502527 FAM98CQ17RN3 349 aaKnown RBP19.01■□□□□ 0.63
VCAN-204ENST00000502527 SPECC1Q5M775 1068 aa19.01■□□□□ 0.63
VCAN-204ENST00000502527 RC3H1Q5TC82 1133 aaKnown RBP19.01■□□□□ 0.63
VCAN-204ENST00000502527 CCDC112Q8NEF3 446 aa19.01■□□□□ 0.63
VCAN-204ENST00000502527 OXER1Q8TDS5 423 aa19.01■□□□□ 0.63
VCAN-204ENST00000502527 ZNF384Q8TF68 577 aa19.01■□□□□ 0.63
VCAN-204ENST00000502527 NSUN4Q96CB9 384 aaKnown RBP19.01■□□□□ 0.63
VCAN-204ENST00000502527 SETDB2Q96T68 719 aa19.01■□□□□ 0.63
VCAN-204ENST00000502527 CABP5Q9NP86 173 aa19.01■□□□□ 0.63
VCAN-204ENST00000502527 NARFQ9UHQ1 456 aa19.01■□□□□ 0.63
VCAN-204ENST00000502527 SMIM22K7EJ46 135 aa19■□□□□ 0.63
VCAN-204ENST00000502527 HIBADHP31937 336 aaKnown RBP19■□□□□ 0.63
VCAN-204ENST00000502527 KANK3Q6NY19 840 aa19■□□□□ 0.63
VCAN-204ENST00000502527 TMED8Q6PL24 325 aaPredicted RBP19■□□□□ 0.63
VCAN-204ENST00000502527 A0A1B0GUL6 1792 aa19■□□□□ 0.63
VCAN-204ENST00000502527 DUOX1Q9NRD9 1551 aa19■□□□□ 0.63
VCAN-204ENST00000502527 POLR2DO15514 142 aaKnown RBP18.99■□□□□ 0.63
VCAN-204ENST00000502527 DDAH1O94760 285 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 SERPINC1P01008 464 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 ATP1A3P13637 1013 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 KCNQ4P56696 695 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 FUT2Q10981 343 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 POSTNQ15063 836 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 PKN1Q16512 942 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 ARMCX5Q6P1M9 558 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 NBPF5PQ86XG9 351 aaPredicted RBP18.99■□□□□ 0.63
VCAN-204ENST00000502527 CRNKL1Q9BZJ0 848 aaKnown RBP18.99■□□□□ 0.63
VCAN-204ENST00000502527 TRIM75PA6NK02 468 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 USP17L12C9JPN9 530 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 USP17L21D6R901 530 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 KIF2AO00139 706 aaPredicted RBP18.99■□□□□ 0.63
VCAN-204ENST00000502527 PRDM1O75626 825 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 KRT2P35908 639 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 KCNJ6P48051 423 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 UBASH3AP57075 661 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 MECOMQ03112 1051 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 GRIN1Q05586 938 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 SYCP1Q15431 976 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 PHF20Q9BVI0 1012 aa18.99■□□□□ 0.63
VCAN-204ENST00000502527 SCN7AQ01118 1682 aa18.98■□□□□ 0.63
VCAN-204ENST00000502527 ORC4O43929 436 aa18.98■□□□□ 0.63
VCAN-204ENST00000502527 RPS6KA4O75676 772 aa18.98■□□□□ 0.63
VCAN-204ENST00000502527 ATP2B1P20020 1258 aa18.98■□□□□ 0.63
VCAN-204ENST00000502527 TROAPQ12815 778 aa18.98■□□□□ 0.63
VCAN-204ENST00000502527 NT5DC1Q5TFE4 455 aa18.98■□□□□ 0.63
VCAN-204ENST00000502527 ATP8A2Q9NTI2 1148 aa18.98■□□□□ 0.63
VCAN-204ENST00000502527 VPS54Q9P1Q0 977 aa18.98■□□□□ 0.63
VCAN-204ENST00000502527 SERTAD1Q9UHV2 236 aa18.98■□□□□ 0.63
VCAN-204ENST00000502527 DACH1Q9UI36 760 aa18.98■□□□□ 0.63
VCAN-204ENST00000502527 V9GY48 417 aaPredicted RBP18.98■□□□□ 0.63
VCAN-204ENST00000502527 FOXN1O15353 648 aa18.97■□□□□ 0.63
VCAN-204ENST00000502527 ZPR1O75312 459 aa18.97■□□□□ 0.63
VCAN-204ENST00000502527 KLRK1P26718 216 aa18.97■□□□□ 0.63
VCAN-204ENST00000502527 MLKLQ8NB16 471 aa18.97■□□□□ 0.63
VCAN-204ENST00000502527 ZNF592Q92610 1267 aa18.97■□□□□ 0.63
VCAN-204ENST00000502527 BRMS1Q9HCU9 246 aa18.97■□□□□ 0.63
VCAN-204ENST00000502527 TRMT1Q9NXH9 659 aaKnown RBP18.97■□□□□ 0.63
VCAN-204ENST00000502527 MAN1B1Q9UKM7 699 aa18.97■□□□□ 0.63
VCAN-204ENST00000502527 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.97■□□□□ 0.63
VCAN-204ENST00000502527 BMP15O95972 392 aa18.97■□□□□ 0.63
VCAN-204ENST00000502527 TPTE2Q6XPS3 522 aa18.97■□□□□ 0.63
VCAN-204ENST00000502527 TRIML1Q8N9V2 468 aa18.97■□□□□ 0.63
VCAN-204ENST00000502527 ANKRD7Q92527 254 aa18.97■□□□□ 0.63
VCAN-204ENST00000502527 SMARCE1Q969G3 411 aa18.97■□□□□ 0.63
VCAN-204ENST00000502527 CCDC34Q96HJ3 373 aa18.97■□□□□ 0.63
VCAN-204ENST00000502527 PLEKHA8P1O95397 391 aa18.96■□□□□ 0.63
VCAN-204ENST00000502527 BMP6P22004 513 aa18.96■□□□□ 0.63
VCAN-204ENST00000502527 SARSP49591 514 aaKnown RBP18.96■□□□□ 0.63
VCAN-204ENST00000502527 CFAP100Q494V2 611 aa18.96■□□□□ 0.63
VCAN-204ENST00000502527 TMTC3Q6ZXV5 915 aa18.96■□□□□ 0.63
VCAN-204ENST00000502527 SHISA4Q96DD7 197 aa18.96■□□□□ 0.63
VCAN-204ENST00000502527 CSRNP2Q9H175 543 aa18.96■□□□□ 0.63
VCAN-204ENST00000502527 DCP1AQ9NPI6 582 aaPredicted RBP18.96■□□□□ 0.63
VCAN-204ENST00000502527 FANCLQ9NW38 375 aa18.96■□□□□ 0.63
VCAN-204ENST00000502527 TFCP2L1Q9NZI6 479 aa18.96■□□□□ 0.63
VCAN-204ENST00000502527 LTBP4Q8N2S1 1624 aa18.96■□□□□ 0.63
VCAN-204ENST00000502527 PSDA5PKW4 1024 aaPredicted RBP18.96■□□□□ 0.63
VCAN-204ENST00000502527 CCDC94Q9BW85 323 aaPredicted RBP18.96■□□□□ 0.63
VCAN-204ENST00000502527 AATFQ9NY61 560 aaKnown RBP eCLIP18.96■□□□□ 0.63
VCAN-204ENST00000502527 ARPP21Q9UBL0 812 aaPredicted RBP18.96■□□□□ 0.63
VCAN-204ENST00000502527 SRP68Q9UHB9 627 aaKnown RBP18.96■□□□□ 0.63
VCAN-204ENST00000502527 ACTN4O43707 911 aaKnown RBP18.95■□□□□ 0.62
VCAN-204ENST00000502527 PDE4BQ07343 736 aa18.95■□□□□ 0.62
VCAN-204ENST00000502527 MORC3Q14149 939 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms