RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 KLHL23Q8NBE8 558 aa8.69□□□□□ -1.02
CRNDE-201ENST00000501177 FAM46AQ96IP4 442 aaKnown RBP8.69□□□□□ -1.02
CRNDE-201ENST00000501177 MTFR1LQ9H019 292 aa8.69□□□□□ -1.02
CRNDE-201ENST00000501177 SEC31BQ9NQW1 1179 aa8.69□□□□□ -1.02
CRNDE-201ENST00000501177 POLR3AO14802 1390 aaPredicted RBP8.69□□□□□ -1.02
CRNDE-201ENST00000501177 H3BRJ5 948 aa8.68□□□□□ -1.02
CRNDE-201ENST00000501177 CCDC82Q8N4S0 544 aa8.68□□□□□ -1.02
CRNDE-201ENST00000501177 SYT17Q9BSW7 474 aa8.68□□□□□ -1.02
CRNDE-201ENST00000501177 HIRIP3Q9BW71 556 aaPredicted RBP8.68□□□□□ -1.02
CRNDE-201ENST00000501177 STK32BQ9NY57 414 aa8.68□□□□□ -1.02
CRNDE-201ENST00000501177 STOML1Q9UBI4 398 aa8.68□□□□□ -1.02
CRNDE-201ENST00000501177 USP19O94966 1318 aa8.68□□□□□ -1.02
CRNDE-201ENST00000501177 BRD4O60885 1362 aaPredicted RBP8.68□□□□□ -1.02
CRNDE-201ENST00000501177 QSER1Q2KHR3 1735 aa8.68□□□□□ -1.02
CRNDE-201ENST00000501177 CARNS1A5YM72 827 aa8.67□□□□□ -1.02
CRNDE-201ENST00000501177 ZBTB7AO95365 584 aa8.67□□□□□ -1.02
CRNDE-201ENST00000501177 MZF1P28698 734 aaPredicted RBP8.67□□□□□ -1.02
CRNDE-201ENST00000501177 CD97P48960 835 aa8.67□□□□□ -1.02
CRNDE-201ENST00000501177 FAM117BQ6P1L5 589 aa8.67□□□□□ -1.02
CRNDE-201ENST00000501177 MPHOSPH9Q99550 1183 aa8.67□□□□□ -1.02
CRNDE-201ENST00000501177 POLIQ9UNA4 740 aa8.67□□□□□ -1.02
CRNDE-201ENST00000501177 GOLGB1Q14789 3259 aaKnown RBP8.67□□□□□ -1.02
CRNDE-201ENST00000501177 NHSQ6T4R5 1651 aa8.66□□□□□ -1.02
CRNDE-201ENST00000501177 PDE2AO00408 941 aaPredicted RBP8.66□□□□□ -1.02
CRNDE-201ENST00000501177 DHX15O43143 795 aaKnown RBP8.66□□□□□ -1.02
CRNDE-201ENST00000501177 TGFB1P01137 390 aa8.66□□□□□ -1.02
CRNDE-201ENST00000501177 IGLV1-40P01703 118 aa8.66□□□□□ -1.02
CRNDE-201ENST00000501177 DDB1Q16531 1140 aa8.66□□□□□ -1.02
CRNDE-201ENST00000501177 SLC51AQ86UW1 340 aa8.66□□□□□ -1.02
CRNDE-201ENST00000501177 UTP4Q969X6 686 aaKnown RBP8.66□□□□□ -1.02
CRNDE-201ENST00000501177 CEP41Q9BYV8 373 aa8.66□□□□□ -1.02
CRNDE-201ENST00000501177 C7orf69Q9H7B7 122 aa8.66□□□□□ -1.02
CRNDE-201ENST00000501177 C1orf115Q9H7X2 142 aa8.66□□□□□ -1.02
CRNDE-201ENST00000501177 PCMTD2Q9NV79 361 aa8.66□□□□□ -1.02
CRNDE-201ENST00000501177 SOX13Q9UN79 622 aa8.66□□□□□ -1.02
CRNDE-201ENST00000501177 TRAK1Q9UPV9 953 aa8.66□□□□□ -1.02
CRNDE-201ENST00000501177 COL24A1Q17RW2 1714 aa8.66□□□□□ -1.02
CRNDE-201ENST00000501177 PAPPAQ13219 1627 aa8.65□□□□□ -1.02
CRNDE-201ENST00000501177 EREGO14944 169 aa8.65□□□□□ -1.02
CRNDE-201ENST00000501177 RPLP1P05386 114 aaKnown RBP8.65□□□□□ -1.02
CRNDE-201ENST00000501177 NLRP12P59046 1061 aa8.65□□□□□ -1.02
CRNDE-201ENST00000501177 SLC15A2Q16348 729 aa8.65□□□□□ -1.02
CRNDE-201ENST00000501177 PHLDB3Q6NSJ2 640 aa8.65□□□□□ -1.02
CRNDE-201ENST00000501177 TRIM42Q8IWZ5 723 aa8.65□□□□□ -1.02
CRNDE-201ENST00000501177 MYRFLQ96LU7 910 aa8.65□□□□□ -1.02
CRNDE-201ENST00000501177 SHANK3Q9BYB0 1731 aa8.65□□□□□ -1.03
CRNDE-201ENST00000501177 SLIT3O75094 1523 aa8.64□□□□□ -1.03
CRNDE-201ENST00000501177 COL18A1P39060 1754 aa8.64□□□□□ -1.03
CRNDE-201ENST00000501177 HMX2A2RU54 273 aa8.64□□□□□ -1.03
CRNDE-201ENST00000501177 ZDHHC13Q8IUH4 622 aa8.64□□□□□ -1.03
CRNDE-201ENST00000501177 SLC7A3Q8WY07 619 aa8.64□□□□□ -1.03
CRNDE-201ENST00000501177 ZKSCAN3Q9BRR0 538 aa8.64□□□□□ -1.03
CRNDE-201ENST00000501177 FOXD3Q9UJU5 478 aaPredicted RBP8.64□□□□□ -1.03
CRNDE-201ENST00000501177 QRICH2Q9H0J4 1663 aa8.64□□□□□ -1.03
CRNDE-201ENST00000501177 KAT6BQ8WYB5 2073 aa8.63□□□□□ -1.03
CRNDE-201ENST00000501177 KIAA1210Q9ULL0 1709 aa8.63□□□□□ -1.03
CRNDE-201ENST00000501177 ACEP12821 1306 aa8.63□□□□□ -1.03
CRNDE-201ENST00000501177 GCP02774 474 aa8.63□□□□□ -1.03
CRNDE-201ENST00000501177 PCSK2P16519 638 aa8.63□□□□□ -1.03
CRNDE-201ENST00000501177 NPR3P17342 541 aa8.63□□□□□ -1.03
CRNDE-201ENST00000501177 PREPP48147 710 aa8.63□□□□□ -1.03
CRNDE-201ENST00000501177 TXNRD1Q16881 649 aa8.63□□□□□ -1.03
CRNDE-201ENST00000501177 UVSSAQ2YD98 709 aa8.63□□□□□ -1.03
CRNDE-201ENST00000501177 TMEM102Q8N9M5 508 aaPredicted RBP8.63□□□□□ -1.03
CRNDE-201ENST00000501177 WNT8BQ93098 351 aa8.63□□□□□ -1.03
CRNDE-201ENST00000501177 NXPE3Q969Y0 559 aa8.63□□□□□ -1.03
CRNDE-201ENST00000501177 PDGFDQ9GZP0 370 aaPredicted RBP8.63□□□□□ -1.03
CRNDE-201ENST00000501177 ABCC6O95255 1503 aa8.63□□□□□ -1.03
CRNDE-201ENST00000501177 TRPM1Q7Z4N2 1603 aa8.62□□□□□ -1.03
CRNDE-201ENST00000501177 FZD6O60353 706 aa8.62□□□□□ -1.03
CRNDE-201ENST00000501177 TNFRSF21O75509 655 aa8.62□□□□□ -1.03
CRNDE-201ENST00000501177 CABP4P57796 275 aa8.62□□□□□ -1.03
CRNDE-201ENST00000501177 NFIAQ12857 509 aa8.62□□□□□ -1.03
CRNDE-201ENST00000501177 GPR162Q16538 588 aa8.62□□□□□ -1.03
CRNDE-201ENST00000501177 NUTM2GQ5VZR2 741 aa8.62□□□□□ -1.03
CRNDE-201ENST00000501177 VN1R5Q7Z5H4 357 aa8.62□□□□□ -1.03
CRNDE-201ENST00000501177 OSMRQ99650 979 aa8.62□□□□□ -1.03
CRNDE-201ENST00000501177 KRTAP4-12Q9BQ66 201 aa8.62□□□□□ -1.03
CRNDE-201ENST00000501177 OSGEPQ9NPF4 335 aa8.62□□□□□ -1.03
CRNDE-201ENST00000501177 LATS2Q9NRM7 1088 aa8.62□□□□□ -1.03
CRNDE-201ENST00000501177 TNS2Q63HR2 1409 aa8.62□□□□□ -1.03
CRNDE-201ENST00000501177 BTAF1O14981 1849 aa8.61□□□□□ -1.03
CRNDE-201ENST00000501177 RGPD5Q99666 1765 aa8.61□□□□□ -1.03
CRNDE-201ENST00000501177 WDR17Q8IZU2 1322 aa8.61□□□□□ -1.03
CRNDE-201ENST00000501177 FAM177BA6PVY3 158 aa8.61□□□□□ -1.03
CRNDE-201ENST00000501177 SOX1O00570 391 aaPredicted RBP8.61□□□□□ -1.03
CRNDE-201ENST00000501177 TOM1L2Q6ZVM7 507 aa8.61□□□□□ -1.03
CRNDE-201ENST00000501177 FAM20CQ8IXL6 584 aa8.61□□□□□ -1.03
CRNDE-201ENST00000501177 KIAA1324LA8MWY0 1029 aaPredicted RBP8.6□□□□□ -1.03
CRNDE-201ENST00000501177 GSC2O15499 205 aa8.6□□□□□ -1.03
CRNDE-201ENST00000501177 ADAMTS4O75173 837 aa8.6□□□□□ -1.03
CRNDE-201ENST00000501177 PEAR1Q5VY43 1037 aaPredicted RBP8.6□□□□□ -1.03
CRNDE-201ENST00000501177 RNF43Q68DV7 783 aa8.6□□□□□ -1.03
CRNDE-201ENST00000501177 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.6□□□□□ -1.03
CRNDE-201ENST00000501177 PMEPA1Q969W9 287 aa8.6□□□□□ -1.03
CRNDE-201ENST00000501177 CDK19Q9BWU1 502 aa8.6□□□□□ -1.03
CRNDE-201ENST00000501177 ANO2Q9NQ90 1003 aa8.6□□□□□ -1.03
CRNDE-201ENST00000501177 CCDC87Q9NVE4 849 aa8.6□□□□□ -1.03
CRNDE-201ENST00000501177 CPSF1Q10570 1443 aaKnown RBP8.6□□□□□ -1.03
CRNDE-201ENST00000501177 CCDC7Q96M83 1385 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms